RNA–Protein interactions for RNA: ENST00000368289.6

ECHDC1-202, Transcript of ethylmalonyl-CoA decarboxylase 1, humanhuman

TSL 5 BASIC

Gene ECHDC1, Length 909 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ECHDC1-202ENST00000368289 ANKRD13CQ8N6S4 541 aa7.6□□□□□ -1.19
ECHDC1-202ENST00000368289 CHMP4CQ96CF2 233 aa7.6□□□□□ -1.19
ECHDC1-202ENST00000368289 TMX3Q96JJ7 454 aa7.6□□□□□ -1.19
ECHDC1-202ENST00000368289 DUSP9Q99956 384 aaKnown RBP7.6□□□□□ -1.19
ECHDC1-202ENST00000368289 LACRTQ9GZZ8 138 aa7.6□□□□□ -1.19
ECHDC1-202ENST00000368289 SRA1Q9HD15 236 aaKnown RBP7.6□□□□□ -1.19
ECHDC1-202ENST00000368289 CD209Q9NNX6 404 aa7.6□□□□□ -1.19
ECHDC1-202ENST00000368289 SH2B1Q9NRF2 756 aaPredicted RBP7.6□□□□□ -1.19
ECHDC1-202ENST00000368289 PARP2Q9UGN5 583 aa7.6□□□□□ -1.19
ECHDC1-202ENST00000368289 ZNF112Q9UJU3 913 aa7.6□□□□□ -1.19
ECHDC1-202ENST00000368289 ATP11BQ9Y2G3 1177 aa7.6□□□□□ -1.19
ECHDC1-202ENST00000368289 PPME1Q9Y570 386 aa7.6□□□□□ -1.19
ECHDC1-202ENST00000368289 ARAP2Q8WZ64 1704 aa7.6□□□□□ -1.19
ECHDC1-202ENST00000368289 UTYO14607 1347 aa7.59□□□□□ -1.19
ECHDC1-202ENST00000368289 RLFQ13129 1914 aa7.59□□□□□ -1.19
ECHDC1-202ENST00000368289 A0A096LPE4 126 aa7.59□□□□□ -1.19
ECHDC1-202ENST00000368289 A0A1W2PPZ6 126 aa7.59□□□□□ -1.19
ECHDC1-202ENST00000368289 RBM47A0AV96 593 aaKnown RBP7.59□□□□□ -1.19
ECHDC1-202ENST00000368289 F6X3S4 739 aa7.59□□□□□ -1.19
ECHDC1-202ENST00000368289 SMARCA5O60264 1052 aaPredicted RBP7.59□□□□□ -1.19
ECHDC1-202ENST00000368289 SURF6O75683 361 aaKnown RBP7.59□□□□□ -1.19
ECHDC1-202ENST00000368289 NID1P14543 1247 aa7.59□□□□□ -1.19
ECHDC1-202ENST00000368289 HOXB4P17483 251 aaPredicted RBP7.59□□□□□ -1.19
ECHDC1-202ENST00000368289 EIF4BP23588 611 aaKnown RBP7.59□□□□□ -1.19
ECHDC1-202ENST00000368289 SNRPNP63162 240 aaKnown RBP7.59□□□□□ -1.19
ECHDC1-202ENST00000368289 TCF15Q12870 199 aa7.59□□□□□ -1.19
ECHDC1-202ENST00000368289 PSMD2Q13200 908 aa7.59□□□□□ -1.19
ECHDC1-202ENST00000368289 GRM2Q14416 872 aa7.59□□□□□ -1.19
ECHDC1-202ENST00000368289 CCL14Q16627 93 aa7.59□□□□□ -1.19
ECHDC1-202ENST00000368289 TRIM60Q495X7 471 aa7.59□□□□□ -1.19
ECHDC1-202ENST00000368289 BEND3Q5T5X7 828 aa7.59□□□□□ -1.19
ECHDC1-202ENST00000368289 MCTP1Q6DN14 999 aa7.59□□□□□ -1.19
ECHDC1-202ENST00000368289 LRSAM1Q6UWE0 723 aa7.59□□□□□ -1.19
ECHDC1-202ENST00000368289 KSR2Q6VAB6 950 aa7.59□□□□□ -1.19
ECHDC1-202ENST00000368289 MIGA2Q7L4E1 593 aa7.59□□□□□ -1.19
ECHDC1-202ENST00000368289 ERMP1Q7Z2K6 904 aa7.59□□□□□ -1.19
ECHDC1-202ENST00000368289 MAP4K3Q8IVH8 894 aa7.59□□□□□ -1.19
ECHDC1-202ENST00000368289 DTWD1Q8N5C7 304 aa7.59□□□□□ -1.19
ECHDC1-202ENST00000368289 TMEM87AQ8NBN3 555 aa7.59□□□□□ -1.19
ECHDC1-202ENST00000368289 USP6NLQ92738 828 aa7.59□□□□□ -1.19
ECHDC1-202ENST00000368289 KCNB2Q92953 911 aa7.59□□□□□ -1.19
ECHDC1-202ENST00000368289 TCF12Q99081 682 aa7.59□□□□□ -1.19
ECHDC1-202ENST00000368289 ALDH8A1Q9H2A2 487 aaPredicted RBP7.59□□□□□ -1.19
ECHDC1-202ENST00000368289 PRDM5Q9NQX1 630 aaPredicted RBP7.59□□□□□ -1.19
ECHDC1-202ENST00000368289 YBX2Q9Y2T7 364 aaKnown RBP7.59□□□□□ -1.19
ECHDC1-202ENST00000368289 LRRFIP2Q9Y608 721 aaKnown RBP7.59□□□□□ -1.19
ECHDC1-202ENST00000368289 AK5Q9Y6K8 562 aa7.59□□□□□ -1.19
ECHDC1-202ENST00000368289 PLXNA1Q9UIW2 1896 aa7.59□□□□□ -1.19
ECHDC1-202ENST00000368289 A0A0G2JLL6 359 aaPredicted RBP7.58□□□□□ -1.2
ECHDC1-202ENST00000368289 PNMA6EA0A0J9YXQ4 647 aa7.58□□□□□ -1.2
ECHDC1-202ENST00000368289 TMEM238LA0A1B0GVL6 79 aa7.58□□□□□ -1.2
ECHDC1-202ENST00000368289 RFXAPO00287 272 aa7.58□□□□□ -1.2
ECHDC1-202ENST00000368289 SGSM2O43147 1006 aa7.58□□□□□ -1.2
ECHDC1-202ENST00000368289 EIF2S2P20042 333 aaKnown RBP7.58□□□□□ -1.2
ECHDC1-202ENST00000368289 CYP2B6P20813 491 aa7.58□□□□□ -1.2
ECHDC1-202ENST00000368289 GSTT1P30711 240 aa7.58□□□□□ -1.2
ECHDC1-202ENST00000368289 ARL4DP49703 201 aa7.58□□□□□ -1.2
ECHDC1-202ENST00000368289 RAC1P63000 192 aa7.58□□□□□ -1.2
ECHDC1-202ENST00000368289 DAB2P98082 770 aa7.58□□□□□ -1.2
ECHDC1-202ENST00000368289 ANKRD1Q15327 319 aa7.58□□□□□ -1.2
ECHDC1-202ENST00000368289 ZSCAN23Q3MJ62 389 aa7.58□□□□□ -1.2
ECHDC1-202ENST00000368289 NXPE4Q6UWF7 544 aa7.58□□□□□ -1.2
ECHDC1-202ENST00000368289 PI16Q6UXB8 463 aa7.58□□□□□ -1.2
ECHDC1-202ENST00000368289 SLC39A5Q6ZMH5 540 aa7.58□□□□□ -1.2
ECHDC1-202ENST00000368289 PRRT2Q7Z6L0 340 aaPredicted RBP7.58□□□□□ -1.2
ECHDC1-202ENST00000368289 ZSCAN30Q86W11 494 aa7.58□□□□□ -1.2
ECHDC1-202ENST00000368289 LINS1Q8NG48 757 aa7.58□□□□□ -1.2
ECHDC1-202ENST00000368289 OTUD7AQ8TE49 926 aaPredicted RBP7.58□□□□□ -1.2
ECHDC1-202ENST00000368289 RILPL2Q969X0 211 aa7.58□□□□□ -1.2
ECHDC1-202ENST00000368289 COA7Q96BR5 231 aa7.58□□□□□ -1.2
ECHDC1-202ENST00000368289 EVI5LQ96CN4 794 aa7.58□□□□□ -1.2
ECHDC1-202ENST00000368289 PDLIM2Q96JY6 352 aa7.58□□□□□ -1.2
ECHDC1-202ENST00000368289 BUD13Q9BRD0 619 aaKnown RBP eCLIP7.58□□□□□ -1.27e-6■■■■□ 21.2
ECHDC1-202ENST00000368289 PLVAPQ9BX97 442 aa7.58□□□□□ -1.2
ECHDC1-202ENST00000368289 C12orf49Q9H741 205 aa7.58□□□□□ -1.2
ECHDC1-202ENST00000368289 FAM86C1Q9NVL1 165 aa7.58□□□□□ -1.2
ECHDC1-202ENST00000368289 FAM8A1Q9UBU6 413 aa7.58□□□□□ -1.2
ECHDC1-202ENST00000368289 LIMCH1Q9UPQ0 1083 aa7.58□□□□□ -1.2
ECHDC1-202ENST00000368289 EXOC6BQ9Y2D4 811 aa7.58□□□□□ -1.2
ECHDC1-202ENST00000368289 RFX7Q2KHR2 1363 aa7.58□□□□□ -1.2
ECHDC1-202ENST00000368289 CNTNAP5Q8WYK1 1306 aa7.57□□□□□ -1.2
ECHDC1-202ENST00000368289 EPOPA6NHQ4 379 aa7.57□□□□□ -1.2
ECHDC1-202ENST00000368289 SRGAP3O43295 1099 aa7.57□□□□□ -1.2
ECHDC1-202ENST00000368289 MYO1BO43795 1136 aa7.57□□□□□ -1.2
ECHDC1-202ENST00000368289 SORBS3O60504 671 aa7.57□□□□□ -1.2
ECHDC1-202ENST00000368289 TPM2P07951 284 aa7.57□□□□□ -1.2
ECHDC1-202ENST00000368289 ITPKAP23677 461 aa7.57□□□□□ -1.2
ECHDC1-202ENST00000368289 MSNP26038 577 aaKnown RBP7.57□□□□□ -1.2
ECHDC1-202ENST00000368289 PSMA5P28066 241 aa7.57□□□□□ -1.2
ECHDC1-202ENST00000368289 TRIM28Q13263 835 aaKnown RBP7.57□□□□□ -1.2
ECHDC1-202ENST00000368289 COL9A3Q14050 684 aaPredicted RBP7.57□□□□□ -1.2
ECHDC1-202ENST00000368289 AAK1Q2M2I8 961 aa7.57□□□□□ -1.2
ECHDC1-202ENST00000368289 PRRT3Q5FWE3 981 aa7.57□□□□□ -1.2
ECHDC1-202ENST00000368289 VPS53Q5VIR6 699 aa7.57□□□□□ -1.2
ECHDC1-202ENST00000368289 DTHD1Q6ZMT9 781 aa7.57□□□□□ -1.2
ECHDC1-202ENST00000368289 DMRTC2Q8IXT2 367 aaPredicted RBP7.57□□□□□ -1.2
ECHDC1-202ENST00000368289 TRPV1Q8NER1 839 aa7.57□□□□□ -1.2
ECHDC1-202ENST00000368289 PI4K2BQ8TCG2 481 aa7.57□□□□□ -1.2
ECHDC1-202ENST00000368289 WNT8BQ93098 351 aa7.57□□□□□ -1.2
ECHDC1-202ENST00000368289 HHIPQ96QV1 700 aa7.57□□□□□ -1.2
Retrieved 100 of 20,778 RNA–protein pairs in 55.1 ms