RNA–Protein interactions for RNA: ENST00000366766.6

CDC42BPA-203, Transcript of CDC42 binding protein kinase alpha, humanhuman

TSL 5 BASIC

Gene CDC42BPA, Length 10,610 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42BPA-203ENST00000366766 GGPS1O95749 300 aa13.01□□□□□ -0.33
CDC42BPA-203ENST00000366766 FDX1P10109 184 aa13.01□□□□□ -0.33
CDC42BPA-203ENST00000366766 RRP15Q9Y3B9 282 aaKnown RBP13.01□□□□□ -0.33
CDC42BPA-203ENST00000366766 DR1Q01658 176 aa13.01□□□□□ -0.33
CDC42BPA-203ENST00000366766 GJA3Q9Y6H8 435 aa13.01□□□□□ -0.33
CDC42BPA-203ENST00000366766 DDIT3P35638 169 aa13.01□□□□□ -0.33
CDC42BPA-203ENST00000366766 MECOMQ03112 1051 aa13.01□□□□□ -0.33
CDC42BPA-203ENST00000366766 MB21D2Q8IYB1 491 aaPredicted RBP13.01□□□□□ -0.33
CDC42BPA-203ENST00000366766 RABL6Q3YEC7 729 aaPredicted RBP13.01□□□□□ -0.33
CDC42BPA-203ENST00000366766 CTNND1O60716 968 aaKnown RBP13.01□□□□□ -0.33
CDC42BPA-203ENST00000366766 NAALADL2Q58DX5 795 aa13.01□□□□□ -0.33
CDC42BPA-203ENST00000366766 MB21D1Q8N884 522 aa13.01□□□□□ -0.33
CDC42BPA-203ENST00000366766 CPDO75976 1380 aa13.01□□□□□ -0.33
CDC42BPA-203ENST00000366766 DHX9Q08211 1270 aaKnown RBP13.01□□□□□ -0.33
CDC42BPA-203ENST00000366766 STRIP2Q9ULQ0 834 aa13.01□□□□□ -0.33
CDC42BPA-203ENST00000366766 ZBTB5O15062 677 aa13.01□□□□□ -0.33
CDC42BPA-203ENST00000366766 KMT5BQ4FZB7 885 aa13.01□□□□□ -0.33
CDC42BPA-203ENST00000366766 PCGF5Q86SE9 256 aa13.01□□□□□ -0.33
CDC42BPA-203ENST00000366766 GUF1Q8N442 669 aaKnown RBP13.01□□□□□ -0.33
CDC42BPA-203ENST00000366766 METTL13Q8N6R0 699 aa13.01□□□□□ -0.33
CDC42BPA-203ENST00000366766 SUDS3Q9H7L9 328 aaPredicted RBP13.01□□□□□ -0.33
CDC42BPA-203ENST00000366766 PCDHB4Q9Y5E5 795 aa13.01□□□□□ -0.33
CDC42BPA-203ENST00000366766 ATP8B3O60423 1300 aa13.01□□□□□ -0.33
CDC42BPA-203ENST00000366766 ERCC6L2Q5T890 1561 aa13.01□□□□□ -0.33
CDC42BPA-203ENST00000366766 SOWAHDA6NJG2 315 aa13□□□□□ -0.33
CDC42BPA-203ENST00000366766 CCDC68Q9H2F9 335 aa13□□□□□ -0.33
CDC42BPA-203ENST00000366766 PCDHB6Q9Y5E3 794 aa13□□□□□ -0.33
CDC42BPA-203ENST00000366766 GFPT2O94808 682 aa13□□□□□ -0.33
CDC42BPA-203ENST00000366766 SCP2P22307 547 aa13□□□□□ -0.33
CDC42BPA-203ENST00000366766 ZYXQ15942 572 aaKnown RBP13□□□□□ -0.33
CDC42BPA-203ENST00000366766 ENOSF1Q7L5Y1 443 aa13□□□□□ -0.33
CDC42BPA-203ENST00000366766 KMT5AQ9NQR1 393 aa13□□□□□ -0.33
CDC42BPA-203ENST00000366766 SPATA31A3Q5VYP0 1347 aa13□□□□□ -0.33
CDC42BPA-203ENST00000366766 ASNSP08243 561 aa13□□□□□ -0.33
CDC42BPA-203ENST00000366766 KRT3P12035 628 aa13□□□□□ -0.33
CDC42BPA-203ENST00000366766 SUPT20HL1Q3ZLR7 823 aa13□□□□□ -0.33
CDC42BPA-203ENST00000366766 PDIK1LQ8N165 341 aa13□□□□□ -0.33
CDC42BPA-203ENST00000366766 EFHD1Q9BUP0 239 aa13□□□□□ -0.33
CDC42BPA-203ENST00000366766 IGKV5-2P06315 115 aa13□□□□□ -0.33
CDC42BPA-203ENST00000366766 FAM167AQ96KS9 214 aa13□□□□□ -0.33
CDC42BPA-203ENST00000366766 LY9Q9HBG7 655 aa13□□□□□ -0.33
CDC42BPA-203ENST00000366766 SH3BP5O60239 455 aa13□□□□□ -0.33
CDC42BPA-203ENST00000366766 TTC13Q8NBP0 860 aa13□□□□□ -0.33
CDC42BPA-203ENST00000366766 PSAPP07602 524 aa13□□□□□ -0.33
CDC42BPA-203ENST00000366766 ARHGAP27Q6ZUM4 889 aa13□□□□□ -0.33
CDC42BPA-203ENST00000366766 CCDC127Q96BQ5 260 aa13□□□□□ -0.33
CDC42BPA-203ENST00000366766 SDCCAG3Q96C92 435 aa13□□□□□ -0.33
CDC42BPA-203ENST00000366766 GDAP1L1Q96MZ0 367 aa13□□□□□ -0.33
CDC42BPA-203ENST00000366766 DNAJC24Q6P3W2 148 aa13□□□□□ -0.33
CDC42BPA-203ENST00000366766 RBM41Q96IZ5 413 aaKnown RBP13□□□□□ -0.33
CDC42BPA-203ENST00000366766 CACYBPQ9HB71 228 aaKnown RBP13□□□□□ -0.33
CDC42BPA-203ENST00000366766 RASGRF2O14827 1237 aa13□□□□□ -0.33
CDC42BPA-203ENST00000366766 TLR3O15455 904 aaKnown RBP13□□□□□ -0.33
CDC42BPA-203ENST00000366766 DCTN3O75935 186 aa13□□□□□ -0.33
CDC42BPA-203ENST00000366766 LMNAP02545 664 aaKnown RBP13□□□□□ -0.33
CDC42BPA-203ENST00000366766 TRIM72Q6ZMU5 477 aa13□□□□□ -0.33
CDC42BPA-203ENST00000366766 BBS5Q8N3I7 341 aa13□□□□□ -0.33
CDC42BPA-203ENST00000366766 SAMSN1Q9NSI8 373 aaKnown RBP13□□□□□ -0.33
CDC42BPA-203ENST00000366766 CALB1P05937 261 aa12.99□□□□□ -0.33
CDC42BPA-203ENST00000366766 PLCB4Q15147 1175 aa12.99□□□□□ -0.33
CDC42BPA-203ENST00000366766 RDH13Q8NBN7 331 aa12.99□□□□□ -0.33
CDC42BPA-203ENST00000366766 ZMYND12Q9H0C1 365 aa12.99□□□□□ -0.33
CDC42BPA-203ENST00000366766 TEX2Q8IWB9 1127 aa12.99□□□□□ -0.33
CDC42BPA-203ENST00000366766 ALKBH5Q6P6C2 394 aaKnown RBP12.99□□□□□ -0.33
CDC42BPA-203ENST00000366766 KIAA0825Q8IV33 1275 aa12.99□□□□□ -0.33
CDC42BPA-203ENST00000366766 TIPINQ9BVW5 301 aa12.99□□□□□ -0.33
CDC42BPA-203ENST00000366766 VIPAS39Q9H9C1 493 aa12.99□□□□□ -0.33
CDC42BPA-203ENST00000366766 TJP3O95049 919 aa12.99□□□□□ -0.33
CDC42BPA-203ENST00000366766 ANAPC5Q9UJX4 755 aa12.99□□□□□ -0.33
CDC42BPA-203ENST00000366766 RIPOR2Q9Y4F9 1068 aa12.99□□□□□ -0.33
CDC42BPA-203ENST00000366766 GOLGA8HP0CJ92 632 aa12.99□□□□□ -0.33
CDC42BPA-203ENST00000366766 ANKRD42Q8N9B4 389 aa12.99□□□□□ -0.33
CDC42BPA-203ENST00000366766 MGARPQ8TDB4 240 aa12.99□□□□□ -0.33
CDC42BPA-203ENST00000366766 CDK8P49336 464 aa12.99□□□□□ -0.33
CDC42BPA-203ENST00000366766 GRM4Q14833 912 aa12.99□□□□□ -0.33
CDC42BPA-203ENST00000366766 FBXO38Q6PIJ6 1188 aa12.99□□□□□ -0.33
CDC42BPA-203ENST00000366766 CCT5P48643 541 aa12.99□□□□□ -0.33
CDC42BPA-203ENST00000366766 RWDD2BP57060 319 aa12.99□□□□□ -0.33
CDC42BPA-203ENST00000366766 CEP120Q8N960 986 aa12.99□□□□□ -0.33
CDC42BPA-203ENST00000366766 KCND2Q9NZV8 630 aa12.99□□□□□ -0.33
CDC42BPA-203ENST00000366766 PPM1FP49593 454 aaPredicted RBP12.99□□□□□ -0.33
CDC42BPA-203ENST00000366766 MESDQ14696 234 aa12.99□□□□□ -0.33
CDC42BPA-203ENST00000366766 CENPUQ71F23 418 aa12.99□□□□□ -0.33
CDC42BPA-203ENST00000366766 TBC1D22BQ9NU19 505 aa12.99□□□□□ -0.33
CDC42BPA-203ENST00000366766 UTYO14607 1347 aa12.98□□□□□ -0.33
CDC42BPA-203ENST00000366766 PDS5AQ29RF7 1337 aaKnown RBP12.98□□□□□ -0.33
CDC42BPA-203ENST00000366766 ITIH6Q6UXX5 1313 aa12.98□□□□□ -0.33
CDC42BPA-203ENST00000366766 ATP2C1P98194 919 aaPredicted RBP12.98□□□□□ -0.33
CDC42BPA-203ENST00000366766 PPCSQ9HAB8 311 aa12.98□□□□□ -0.33
CDC42BPA-203ENST00000366766 USP11P51784 963 aa12.98□□□□□ -0.33
CDC42BPA-203ENST00000366766 GABPAQ06546 454 aa12.98□□□□□ -0.33
CDC42BPA-203ENST00000366766 KCTD2Q14681 263 aa12.98□□□□□ -0.33
CDC42BPA-203ENST00000366766 USPL1Q5W0Q7 1092 aa12.98□□□□□ -0.33
CDC42BPA-203ENST00000366766 CRB1P82279 1406 aa12.98□□□□□ -0.33
CDC42BPA-203ENST00000366766 CYP2E1P05181 493 aaPredicted RBP12.98□□□□□ -0.33
CDC42BPA-203ENST00000366766 TBXAS1P24557 533 aaPredicted RBP12.98□□□□□ -0.33
CDC42BPA-203ENST00000366766 BARHL2Q9NY43 387 aa12.98□□□□□ -0.33
CDC42BPA-203ENST00000366766 MYBL1P10243 752 aa12.98□□□□□ -0.33
CDC42BPA-203ENST00000366766 CYP4A11Q02928 519 aa12.98□□□□□ -0.33
CDC42BPA-203ENST00000366766 ATG16L1Q676U5 607 aa12.98□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 21.1 ms