RNA–Protein interactions for RNA: ENST00000366764.6

CDC42BPA-202, Transcript of CDC42 binding protein kinase alpha, humanhuman

TSL 1 (best) BASIC

Gene CDC42BPA, Length 10,445 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42BPA-202ENST00000366764 KIF1CO43896 1103 aaKnown RBP12.77□□□□□ -0.36
CDC42BPA-202ENST00000366764 SKIP12755 728 aa12.77□□□□□ -0.36
CDC42BPA-202ENST00000366764 C3orf20Q8ND61 904 aa12.77□□□□□ -0.36
CDC42BPA-202ENST00000366764 MROH7-TTC4A0A0A0MT08 1334 aa12.77□□□□□ -0.36
CDC42BPA-202ENST00000366764 CASQ2O14958 399 aaPredicted RBP12.77□□□□□ -0.37
CDC42BPA-202ENST00000366764 PALMO75781 387 aa12.77□□□□□ -0.37
CDC42BPA-202ENST00000366764 FGGP02679 453 aa12.77□□□□□ -0.37
CDC42BPA-202ENST00000366764 KLHL29Q96CT2 875 aa12.77□□□□□ -0.37
CDC42BPA-202ENST00000366764 EEF2KMTQ96G04 330 aa12.77□□□□□ -0.37
CDC42BPA-202ENST00000366764 NUF2Q9BZD4 464 aa12.77□□□□□ -0.37
CDC42BPA-202ENST00000366764 PDIA5Q14554 519 aa12.77□□□□□ -0.37
CDC42BPA-202ENST00000366764 SPATA4Q8NEY3 305 aa12.77□□□□□ -0.37
CDC42BPA-202ENST00000366764 FRMPD2Q68DX3 1309 aaPredicted RBP12.77□□□□□ -0.37
CDC42BPA-202ENST00000366764 A0A1W2PQJ5 194 aa12.77□□□□□ -0.37
CDC42BPA-202ENST00000366764 KIF28PB7ZC32 967 aa12.77□□□□□ -0.37
CDC42BPA-202ENST00000366764 FAM83BQ5T0W9 1011 aa12.77□□□□□ -0.37
CDC42BPA-202ENST00000366764 LRRC47Q8N1G4 583 aaKnown RBP12.77□□□□□ -0.37
CDC42BPA-202ENST00000366764 FAM212AQ96EL1 285 aa12.77□□□□□ -0.37
CDC42BPA-202ENST00000366764 VCX3AQ9NNX9 186 aa12.77□□□□□ -0.37
CDC42BPA-202ENST00000366764 GMNCA6NCL1 334 aa12.77□□□□□ -0.37
CDC42BPA-202ENST00000366764 RIMBP2O15034 1052 aa12.77□□□□□ -0.37
CDC42BPA-202ENST00000366764 CDC27P30260 824 aa12.77□□□□□ -0.37
CDC42BPA-202ENST00000366764 DPYDQ12882 1025 aa12.77□□□□□ -0.37
CDC42BPA-202ENST00000366764 LRIG3Q6UXM1 1119 aa12.77□□□□□ -0.37
CDC42BPA-202ENST00000366764 TC2NQ8N9U0 490 aa12.77□□□□□ -0.37
CDC42BPA-202ENST00000366764 FGFR1OP2Q9NVK5 253 aa12.77□□□□□ -0.37
CDC42BPA-202ENST00000366764 PLEKHA8P1O95397 391 aa12.77□□□□□ -0.37
CDC42BPA-202ENST00000366764 FTCDO95954 541 aa12.77□□□□□ -0.37
CDC42BPA-202ENST00000366764 PPP2R2AP63151 447 aa12.77□□□□□ -0.37
CDC42BPA-202ENST00000366764 BFSP1Q12934 665 aa12.77□□□□□ -0.37
CDC42BPA-202ENST00000366764 WDR93Q6P2C0 686 aa12.77□□□□□ -0.37
CDC42BPA-202ENST00000366764 ZNF653Q96CK0 615 aa12.76□□□□□ -0.37
CDC42BPA-202ENST00000366764 JPH2Q9BR39 696 aaPredicted RBP12.76□□□□□ -0.37
CDC42BPA-202ENST00000366764 CHRNA3P32297 505 aa12.76□□□□□ -0.37
CDC42BPA-202ENST00000366764 ARHGAP4P98171 946 aa12.76□□□□□ -0.37
CDC42BPA-202ENST00000366764 ADAMTS1Q9UHI8 967 aa12.76□□□□□ -0.37
CDC42BPA-202ENST00000366764 FAM187AA6NFU0 413 aa12.76□□□□□ -0.37
CDC42BPA-202ENST00000366764 GUCY2CP25092 1073 aa12.76□□□□□ -0.37
CDC42BPA-202ENST00000366764 AZI2Q9H6S1 392 aa12.76□□□□□ -0.37
CDC42BPA-202ENST00000366764 USTQ9Y2C2 406 aa12.76□□□□□ -0.37
CDC42BPA-202ENST00000366764 DHX34Q14147 1143 aaKnown RBP12.76□□□□□ -0.37
CDC42BPA-202ENST00000366764 MAP7D3Q8IWC1 876 aa12.76□□□□□ -0.37
CDC42BPA-202ENST00000366764 KCTD17Q8N5Z5 321 aa12.76□□□□□ -0.37
CDC42BPA-202ENST00000366764 TCP11Q8WWU5 503 aa12.76□□□□□ -0.37
CDC42BPA-202ENST00000366764 LRRC53A6NM62 1247 aa12.76□□□□□ -0.37
CDC42BPA-202ENST00000366764 MXI1P50539 228 aa12.76□□□□□ -0.37
CDC42BPA-202ENST00000366764 ZKSCAN8Q15776 578 aaPredicted RBP12.76□□□□□ -0.37
CDC42BPA-202ENST00000366764 PLCD3Q8N3E9 789 aa12.76□□□□□ -0.37
CDC42BPA-202ENST00000366764 RASGRP4Q8TDF6 673 aa12.76□□□□□ -0.37
CDC42BPA-202ENST00000366764 EPN3Q9H201 632 aa12.76□□□□□ -0.37
CDC42BPA-202ENST00000366764 GOLGA8HP0CJ92 632 aa12.76□□□□□ -0.37
CDC42BPA-202ENST00000366764 SETSIPP0DME0 302 aa12.76□□□□□ -0.37
CDC42BPA-202ENST00000366764 ATF7P17544 494 aaPredicted RBP12.76□□□□□ -0.37
CDC42BPA-202ENST00000366764 PABPC4Q13310 644 aaKnown RBP eCLIP12.76□□□□□ -0.372e-8■□□□□ 11
CDC42BPA-202ENST00000366764 PDZD4Q76G19 769 aaPredicted RBP12.76□□□□□ -0.37
CDC42BPA-202ENST00000366764 RPAINQ86UA6 219 aa12.76□□□□□ -0.37
CDC42BPA-202ENST00000366764 IGDCC4Q8TDY8 1250 aa12.76□□□□□ -0.37
CDC42BPA-202ENST00000366764 SYN2Q92777 582 aaPredicted RBP12.76□□□□□ -0.37
CDC42BPA-202ENST00000366764 C8orf37Q96NL8 207 aa12.76□□□□□ -0.37
CDC42BPA-202ENST00000366764 SUDS3Q9H7L9 328 aaPredicted RBP12.76□□□□□ -0.37
CDC42BPA-202ENST00000366764 GSG1L2A8MUP6 293 aa12.76□□□□□ -0.37
CDC42BPA-202ENST00000366764 PKD2L1Q9P0L9 805 aa12.76□□□□□ -0.37
CDC42BPA-202ENST00000366764 ANAPC5Q9UJX4 755 aa12.76□□□□□ -0.37
CDC42BPA-202ENST00000366764 MMEP08473 750 aa12.75□□□□□ -0.37
CDC42BPA-202ENST00000366764 MAPK4P31152 587 aa12.75□□□□□ -0.37
CDC42BPA-202ENST00000366764 PSMC4P43686 418 aa12.75□□□□□ -0.37
CDC42BPA-202ENST00000366764 VSNL1P62760 191 aa12.75□□□□□ -0.37
CDC42BPA-202ENST00000366764 CDHR1Q96JP9 859 aa12.75□□□□□ -0.37
CDC42BPA-202ENST00000366764 RILPQ96NA2 401 aa12.75□□□□□ -0.37
CDC42BPA-202ENST00000366764 ABCB5Q2M3G0 1257 aa12.75□□□□□ -0.37
CDC42BPA-202ENST00000366764 DCAF4Q8WV16 495 aa12.75□□□□□ -0.37
CDC42BPA-202ENST00000366764 KRT39Q6A163 491 aa12.75□□□□□ -0.37
CDC42BPA-202ENST00000366764 DEPTORQ8TB45 409 aa12.75□□□□□ -0.37
CDC42BPA-202ENST00000366764 MESDQ14696 234 aa12.75□□□□□ -0.37
CDC42BPA-202ENST00000366764 RINT1Q6NUQ1 792 aa12.75□□□□□ -0.37
CDC42BPA-202ENST00000366764 CD19P15391 556 aa12.75□□□□□ -0.37
CDC42BPA-202ENST00000366764 LIG4P49917 911 aa12.75□□□□□ -0.37
CDC42BPA-202ENST00000366764 MAPK13O15264 365 aa12.75□□□□□ -0.37
CDC42BPA-202ENST00000366764 TEX33O43247 280 aa12.75□□□□□ -0.37
CDC42BPA-202ENST00000366764 SRGNP10124 158 aa12.75□□□□□ -0.37
CDC42BPA-202ENST00000366764 RWDD2BP57060 319 aa12.75□□□□□ -0.37
CDC42BPA-202ENST00000366764 NAA30Q147X3 362 aaPredicted RBP12.75□□□□□ -0.37
CDC42BPA-202ENST00000366764 CCDC125Q86Z20 511 aa12.75□□□□□ -0.37
CDC42BPA-202ENST00000366764 EXOC8Q8IYI6 725 aa12.75□□□□□ -0.37
CDC42BPA-202ENST00000366764 TRIM9Q9C026 710 aa12.75□□□□□ -0.37
CDC42BPA-202ENST00000366764 EIF3HO15372 352 aaKnown RBP eCLIP12.75□□□□□ -0.372e-11■■■□□ 15.4
CDC42BPA-202ENST00000366764 PDCLQ13371 301 aa12.75□□□□□ -0.37
CDC42BPA-202ENST00000366764 AP1ARQ63HQ0 302 aa12.75□□□□□ -0.37
CDC42BPA-202ENST00000366764 FLAD1Q8NFF5 587 aa12.75□□□□□ -0.37
CDC42BPA-202ENST00000366764 C7orf25Q9BPX7 421 aa12.75□□□□□ -0.37
CDC42BPA-202ENST00000366764 ZNF148Q9UQR1 794 aa12.75□□□□□ -0.37
CDC42BPA-202ENST00000366764 TTLL12Q14166 644 aaPredicted RBP12.75□□□□□ -0.37
CDC42BPA-202ENST00000366764 RAD54LQ92698 747 aa12.75□□□□□ -0.37
CDC42BPA-202ENST00000366764 THRAP3Q9Y2W1 955 aaKnown RBP12.75□□□□□ -0.37
CDC42BPA-202ENST00000366764 MYH2Q9UKX2 1941 aa12.75□□□□□ -0.37
CDC42BPA-202ENST00000366764 CDK17Q00537 523 aa12.75□□□□□ -0.37
CDC42BPA-202ENST00000366764 PLCB4Q15147 1175 aa12.75□□□□□ -0.37
CDC42BPA-202ENST00000366764 FRMD5Q7Z6J6 570 aa12.75□□□□□ -0.37
CDC42BPA-202ENST00000366764 POMGNT1Q8WZA1 660 aa12.75□□□□□ -0.37
CDC42BPA-202ENST00000366764 GJB4Q9NTQ9 266 aa12.75□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 26.1 ms