RNA–Protein interactions for RNA: ENST00000366739.5

MRPL55-212, Transcript of mitochondrial ribosomal protein L55, humanhuman

APPRIS P1 TSL 3 BASIC

Gene MRPL55, Length 641 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MRPL55-212ENST00000366739 C11orf84Q9BUA3 381 aaPredicted RBP13.24□□□□□ -0.29
MRPL55-212ENST00000366739 UPF3BQ9BZI7 483 aaKnown RBP13.24□□□□□ -0.29
MRPL55-212ENST00000366739 KCNH6Q9H252 994 aa13.24□□□□□ -0.29
MRPL55-212ENST00000366739 CNNM2Q9H8M5 875 aa13.24□□□□□ -0.29
MRPL55-212ENST00000366739 RTEL1Q9NZ71 1219 aa13.24□□□□□ -0.29
MRPL55-212ENST00000366739 MUTYHQ9UIF7 546 aa13.24□□□□□ -0.29
MRPL55-212ENST00000366739 C5orf42Q9H799 3197 aa13.24□□□□□ -0.29
MRPL55-212ENST00000366739 NLRC5Q86WI3 1866 aa13.24□□□□□ -0.29
MRPL55-212ENST00000366739 RALGAPA2Q2PPJ7 1873 aa13.23□□□□□ -0.29
MRPL55-212ENST00000366739 FRMPD4Q14CM0 1322 aa13.23□□□□□ -0.29
MRPL55-212ENST00000366739 LINC01565O15544 149 aa13.23□□□□□ -0.29
MRPL55-212ENST00000366739 MBTPS2O43462 519 aa13.23□□□□□ -0.29
MRPL55-212ENST00000366739 CYTH3O43739 400 aa13.23□□□□□ -0.29
MRPL55-212ENST00000366739 TBX10O75333 385 aa13.23□□□□□ -0.29
MRPL55-212ENST00000366739 SP4Q02446 784 aa13.23□□□□□ -0.29
MRPL55-212ENST00000366739 NEDD9Q14511 834 aa13.23□□□□□ -0.29
MRPL55-212ENST00000366739 B4GALNT3Q6L9W6 998 aa13.23□□□□□ -0.29
MRPL55-212ENST00000366739 RUFY4Q6ZNE9 571 aa13.23□□□□□ -0.29
MRPL55-212ENST00000366739 PLEKHM2Q8IWE5 1019 aa13.23□□□□□ -0.29
MRPL55-212ENST00000366739 LMAN2LQ9H0V9 348 aa13.23□□□□□ -0.29
MRPL55-212ENST00000366739 IGFLR1Q9H665 355 aa13.23□□□□□ -0.29
MRPL55-212ENST00000366739 RIOX1Q9H6W3 641 aa13.23□□□□□ -0.29
MRPL55-212ENST00000366739 RC3H2Q9HBD1 1191 aaKnown RBP13.23□□□□□ -0.29
MRPL55-212ENST00000366739 ZNF215Q9UL58 517 aaPredicted RBP13.23□□□□□ -0.29
MRPL55-212ENST00000366739 ATG2AQ2TAZ0 1938 aa13.23□□□□□ -0.29
MRPL55-212ENST00000366739 TRIOO75962 3097 aa13.22□□□□□ -0.29
MRPL55-212ENST00000366739 FIBPO43427 364 aa13.22□□□□□ -0.29
MRPL55-212ENST00000366739 SMAD4Q13485 552 aaKnown RBP13.22□□□□□ -0.29
MRPL55-212ENST00000366739 LPIN1Q14693 890 aa13.22□□□□□ -0.29
MRPL55-212ENST00000366739 GRM4Q14833 912 aa13.22□□□□□ -0.29
MRPL55-212ENST00000366739 HERC4Q5GLZ8 1057 aaPredicted RBP13.22□□□□□ -0.29
MRPL55-212ENST00000366739 RNF135Q8IUD6 432 aa13.22□□□□□ -0.29
MRPL55-212ENST00000366739 CLP1Q92989 425 aaKnown RBP13.22□□□□□ -0.29
MRPL55-212ENST00000366739 POP1Q99575 1024 aaKnown RBP13.22□□□□□ -0.29
MRPL55-212ENST00000366739 EHMT1Q9H9B1 1298 aa13.22□□□□□ -0.29
MRPL55-212ENST00000366739 SENP2Q9HC62 589 aa13.22□□□□□ -0.29
MRPL55-212ENST00000366739 ALG13Q9NP73 1137 aaKnown RBP13.22□□□□□ -0.29
MRPL55-212ENST00000366739 RWDD3Q9Y3V2 267 aa13.22□□□□□ -0.29
MRPL55-212ENST00000366739 NRCAMQ92823 1304 aa13.21□□□□□ -0.29
MRPL55-212ENST00000366739 PNMA6FA0A0J9YX94 578 aa13.21□□□□□ -0.29
MRPL55-212ENST00000366739 ENPP3O14638 875 aa13.21□□□□□ -0.29
MRPL55-212ENST00000366739 STAM2O75886 525 aa13.21□□□□□ -0.29
MRPL55-212ENST00000366739 MMP1P03956 469 aa13.21□□□□□ -0.29
MRPL55-212ENST00000366739 MGAT3Q09327 533 aa13.21□□□□□ -0.29
MRPL55-212ENST00000366739 TRAF1Q13077 416 aa13.21□□□□□ -0.29
MRPL55-212ENST00000366739 CAMK1Q14012 370 aa13.21□□□□□ -0.29
MRPL55-212ENST00000366739 BTG3Q14201 252 aaPredicted RBP13.21□□□□□ -0.29
MRPL55-212ENST00000366739 PIBF1Q8WXW3 757 aa13.21□□□□□ -0.29
MRPL55-212ENST00000366739 MFSD14AQ96MC6 490 aa13.21□□□□□ -0.29
MRPL55-212ENST00000366739 IL25Q9H293 177 aa13.21□□□□□ -0.29
MRPL55-212ENST00000366739 OSBPL3Q9H4L5 887 aa13.21□□□□□ -0.29
MRPL55-212ENST00000366739 CD207Q9UJ71 328 aa13.21□□□□□ -0.29
MRPL55-212ENST00000366739 ZNF318Q5VUA4 2279 aa13.21□□□□□ -0.29
MRPL55-212ENST00000366739 STXBP3O00186 592 aa13.2□□□□□ -0.3
MRPL55-212ENST00000366739 HIP1O00291 1037 aa13.2□□□□□ -0.3
MRPL55-212ENST00000366739 PPFIA1Q13136 1202 aa13.2□□□□□ -0.3
MRPL55-212ENST00000366739 TAF2Q6P1X5 1199 aa13.2□□□□□ -0.3
MRPL55-212ENST00000366739 CHD1LQ86WJ1 897 aa13.2□□□□□ -0.3
MRPL55-212ENST00000366739 SMC5Q8IY18 1101 aa13.2□□□□□ -0.3
MRPL55-212ENST00000366739 ZNF689Q96CS4 500 aaPredicted RBP13.2□□□□□ -0.3
MRPL55-212ENST00000366739 PHOX2BQ99453 314 aa13.2□□□□□ -0.3
MRPL55-212ENST00000366739 PLAGL2Q9UPG8 496 aa13.2□□□□□ -0.3
MRPL55-212ENST00000366739 MRPL42Q9Y6G3 142 aaKnown RBP13.2□□□□□ -0.3
MRPL55-212ENST00000366739 DOCK5Q9H7D0 1870 aa13.2□□□□□ -0.3
MRPL55-212ENST00000366739 IFIT3O14879 490 aaKnown RBP13.19□□□□□ -0.3
MRPL55-212ENST00000366739 DGKIO75912 1065 aa13.19□□□□□ -0.3
MRPL55-212ENST00000366739 DNAJB1P25685 340 aa13.19□□□□□ -0.3
MRPL55-212ENST00000366739 MARK3P27448 753 aa13.19□□□□□ -0.3
MRPL55-212ENST00000366739 TCF7P36402 384 aaPredicted RBP13.19□□□□□ -0.3
MRPL55-212ENST00000366739 NDUFV1P49821 464 aa13.19□□□□□ -0.3
MRPL55-212ENST00000366739 TROAPQ12815 778 aa13.19□□□□□ -0.3
MRPL55-212ENST00000366739 ADAM15Q13444 863 aa13.19□□□□□ -0.3
MRPL55-212ENST00000366739 GRIK4Q16099 956 aa13.19□□□□□ -0.3
MRPL55-212ENST00000366739 FBXO47Q5MNV8 452 aa13.19□□□□□ -0.3
MRPL55-212ENST00000366739 PCNX4Q63HM2 1172 aa13.19□□□□□ -0.3
MRPL55-212ENST00000366739 USP17L6PQ6QN14 398 aa13.19□□□□□ -0.3
MRPL55-212ENST00000366739 ADGRD2Q7Z7M1 963 aa13.19□□□□□ -0.3
MRPL55-212ENST00000366739 DNAJB3Q8WWF6 145 aa13.19□□□□□ -0.3
MRPL55-212ENST00000366739 LINC01599Q8WXQ3 324 aa13.19□□□□□ -0.3
MRPL55-212ENST00000366739 EDAQ92838 391 aa13.19□□□□□ -0.3
MRPL55-212ENST00000366739 ZBTB10Q96DT7 871 aa13.19□□□□□ -0.3
MRPL55-212ENST00000366739 MSLNLQ96KJ4 702 aa13.19□□□□□ -0.3
MRPL55-212ENST00000366739 SENP7Q9BQF6 1050 aa13.19□□□□□ -0.3
MRPL55-212ENST00000366739 PLVAPQ9BX97 442 aa13.19□□□□□ -0.3
MRPL55-212ENST00000366739 CDY2AQ9Y6F7 541 aa13.19□□□□□ -0.3
MRPL55-212ENST00000366739 TECTAO75443 2155 aa13.18□□□□□ -0.3
MRPL55-212ENST00000366739 BAZ2BQ9UIF8 2168 aaKnown RBP13.18□□□□□ -0.3
MRPL55-212ENST00000366739 ITGB1P05556 798 aa13.18□□□□□ -0.3
MRPL55-212ENST00000366739 CD52P31358 61 aa13.18□□□□□ -0.3
MRPL55-212ENST00000366739 NUCB1Q02818 461 aa13.18□□□□□ -0.3
MRPL55-212ENST00000366739 MARCH8Q5T0T0 291 aa13.18□□□□□ -0.3
MRPL55-212ENST00000366739 IER5LQ5T953 404 aa13.18□□□□□ -0.3
MRPL55-212ENST00000366739 TSHZ1Q6ZSZ6 1077 aa13.18□□□□□ -0.3
MRPL55-212ENST00000366739 RSPH3Q86UC2 560 aa13.18□□□□□ -0.3
MRPL55-212ENST00000366739 PRSS33Q8NF86 280 aa13.18□□□□□ -0.3
MRPL55-212ENST00000366739 SMARCC2Q8TAQ2 1214 aa13.18□□□□□ -0.3
MRPL55-212ENST00000366739 AGO3Q9H9G7 860 aaKnown RBP13.18□□□□□ -0.3
MRPL55-212ENST00000366739 CLEC1BQ9P126 229 aa13.18□□□□□ -0.3
MRPL55-212ENST00000366739 TUBE1Q9UJT0 475 aa13.18□□□□□ -0.3
MRPL55-212ENST00000366739 GSTTP1A0A1W2PQM5 241 aa13.17□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 27.6 ms