RNA–Protein interactions for RNA: ENST00000366290.2

YBX3-204, Transcript of Y-box binding protein 3, humanhuman

TSL 2

Gene YBX3, Length 512 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
YBX3-204ENST00000366290 FANCIQ9NVI1 1328 aa9.85□□□□□ -0.83
YBX3-204ENST00000366290 PRR33A8MZF0 331 aa9.85□□□□□ -0.83
YBX3-204ENST00000366290 NTSR2O95665 410 aa9.85□□□□□ -0.83
YBX3-204ENST00000366290 ANXA1P04083 346 aa9.85□□□□□ -0.83
YBX3-204ENST00000366290 ZNF865P0CJ78 1059 aaPredicted RBP9.85□□□□□ -0.83
YBX3-204ENST00000366290 CD247P20963 164 aa9.85□□□□□ -0.83
YBX3-204ENST00000366290 TCEAL1Q15170 157 aa9.85□□□□□ -0.83
YBX3-204ENST00000366290 HSP90AB3PQ58FF7 597 aa9.85□□□□□ -0.83
YBX3-204ENST00000366290 SLC10A5Q5PT55 438 aa9.85□□□□□ -0.83
YBX3-204ENST00000366290 TRMT2AQ8IZ69 625 aaKnown RBP9.85□□□□□ -0.83
YBX3-204ENST00000366290 LILRB2Q8N423 598 aa9.85□□□□□ -0.83
YBX3-204ENST00000366290 JMYQ8N9B5 988 aa9.85□□□□□ -0.83
YBX3-204ENST00000366290 C8orf58Q8NAV2 365 aa9.85□□□□□ -0.83
YBX3-204ENST00000366290 DTWD2Q8NBA8 298 aa9.85□□□□□ -0.83
YBX3-204ENST00000366290 SHKBP1Q8TBC3 707 aa9.85□□□□□ -0.83
YBX3-204ENST00000366290 TSR2Q969E8 191 aaKnown RBP9.85□□□□□ -0.83
YBX3-204ENST00000366290 APBA2Q99767 749 aa9.85□□□□□ -0.83
YBX3-204ENST00000366290 OSBPL1AQ9BXW6 950 aa9.85□□□□□ -0.83
YBX3-204ENST00000366290 GBP3Q9H0R5 595 aa9.85□□□□□ -0.83
YBX3-204ENST00000366290 FBXL21Q9UKT6 434 aa9.85□□□□□ -0.83
YBX3-204ENST00000366290 PCDHB12Q9Y5F1 795 aa9.85□□□□□ -0.83
YBX3-204ENST00000366290 ABCC12Q96J65 1359 aa9.85□□□□□ -0.83
YBX3-204ENST00000366290 CCDC88AQ3V6T2 1871 aa9.85□□□□□ -0.83
YBX3-204ENST00000366290 HYAL3O43820 417 aaPredicted RBP9.84□□□□□ -0.83
YBX3-204ENST00000366290 NPR1P16066 1061 aa9.84□□□□□ -0.83
YBX3-204ENST00000366290 HOXA10P31260 410 aaPredicted RBP9.84□□□□□ -0.83
YBX3-204ENST00000366290 SSRP1Q08945 709 aaKnown RBP9.84□□□□□ -0.83
YBX3-204ENST00000366290 SLFN5Q08AF3 891 aa9.84□□□□□ -0.83
YBX3-204ENST00000366290 TCIRG1Q13488 830 aa9.84□□□□□ -0.83
YBX3-204ENST00000366290 SNW1Q13573 536 aaKnown RBP9.84□□□□□ -0.83
YBX3-204ENST00000366290 SV2CQ496J9 727 aa9.84□□□□□ -0.83
YBX3-204ENST00000366290 SUSD4Q5VX71 490 aa9.84□□□□□ -0.83
YBX3-204ENST00000366290 PLBD2Q8NHP8 589 aa9.84□□□□□ -0.83
YBX3-204ENST00000366290 METTL22Q9BUU2 404 aaPredicted RBP9.84□□□□□ -0.83
YBX3-204ENST00000366290 PRDM14Q9GZV8 571 aa9.84□□□□□ -0.83
YBX3-204ENST00000366290 GP6Q9HCN6 339 aa9.84□□□□□ -0.83
YBX3-204ENST00000366290 RNF181Q9P0P0 153 aa9.84□□□□□ -0.83
YBX3-204ENST00000366290 APEX2Q9UBZ4 518 aa9.84□□□□□ -0.83
YBX3-204ENST00000366290 KCNH3Q9ULD8 1083 aa9.84□□□□□ -0.83
YBX3-204ENST00000366290 CACNA1SQ13698 1873 aa9.84□□□□□ -0.83
YBX3-204ENST00000366290 NPHP1O15259 732 aa9.83□□□□□ -0.84
YBX3-204ENST00000366290 GPTP24298 496 aa9.83□□□□□ -0.84
YBX3-204ENST00000366290 FSTL1Q12841 308 aa9.83□□□□□ -0.84
YBX3-204ENST00000366290 PPP1R42Q7Z4L9 355 aa9.83□□□□□ -0.84
YBX3-204ENST00000366290 ADAT2Q7Z6V5 191 aaKnown RBP9.83□□□□□ -0.84
YBX3-204ENST00000366290 NLRP10Q86W26 655 aa9.83□□□□□ -0.84
YBX3-204ENST00000366290 MFSD4AQ8N468 514 aa9.83□□□□□ -0.84
YBX3-204ENST00000366290 TSPYL6Q8N831 410 aa9.83□□□□□ -0.84
YBX3-204ENST00000366290 ZNF513Q8N8E2 541 aaPredicted RBP9.83□□□□□ -0.84
YBX3-204ENST00000366290 ZNF622Q969S3 477 aaKnown RBP eCLIP9.83□□□□□ -0.84
YBX3-204ENST00000366290 RNPC3Q96LT9 517 aaKnown RBP9.83□□□□□ -0.84
YBX3-204ENST00000366290 WHRNQ9P202 907 aa9.83□□□□□ -0.84
YBX3-204ENST00000366290 CAPN6Q9Y6Q1 641 aa9.83□□□□□ -0.84
YBX3-204ENST00000366290 U3KQE9 123 aa9.83□□□□□ -0.84
YBX3-204ENST00000366290 KDM2BQ8NHM5 1336 aa9.82□□□□□ -0.84
YBX3-204ENST00000366290 SNED1Q8TER0 1413 aa9.82□□□□□ -0.84
YBX3-204ENST00000366290 ITGA4P13612 1032 aa9.82□□□□□ -0.84
YBX3-204ENST00000366290 ALDH1B1P30837 517 aa9.82□□□□□ -0.84
YBX3-204ENST00000366290 AIMP1Q12904 312 aaKnown RBP9.82□□□□□ -0.84
YBX3-204ENST00000366290 CCDC30Q5VVM6 783 aa9.82□□□□□ -0.84
YBX3-204ENST00000366290 SDE2Q6IQ49 451 aa9.82□□□□□ -0.84
YBX3-204ENST00000366290 ZDHHC13Q8IUH4 622 aa9.82□□□□□ -0.84
YBX3-204ENST00000366290 FAM181AQ8N9Y4 354 aa9.82□□□□□ -0.84
YBX3-204ENST00000366290 ISCA1Q9BUE6 129 aa9.82□□□□□ -0.84
YBX3-204ENST00000366290 UTP14AQ9BVJ6 771 aaKnown RBP9.82□□□□□ -0.84
YBX3-204ENST00000366290 LAMB2P55268 1798 aa9.82□□□□□ -0.84
YBX3-204ENST00000366290 IQCA1LA6NCM1 817 aa9.81□□□□□ -0.84
YBX3-204ENST00000366290 AGRPO00253 132 aa9.81□□□□□ -0.84
YBX3-204ENST00000366290 ELL2O00472 640 aaPredicted RBP9.81□□□□□ -0.84
YBX3-204ENST00000366290 PPM1BO75688 479 aa9.81□□□□□ -0.84
YBX3-204ENST00000366290 OXCT1P55809 520 aa9.81□□□□□ -0.84
YBX3-204ENST00000366290 ZNF445P59923 1031 aa9.81□□□□□ -0.84
YBX3-204ENST00000366290 EXOSC9Q06265 439 aaKnown RBP9.81□□□□□ -0.84
YBX3-204ENST00000366290 TNK2Q07912 1038 aa9.81□□□□□ -0.84
YBX3-204ENST00000366290 CPSF6Q16630 551 aaKnown RBP eCLIP9.81□□□□□ -0.84
YBX3-204ENST00000366290 ADCY4Q8NFM4 1077 aa9.81□□□□□ -0.84
YBX3-204ENST00000366290 PIWIL2Q8TC59 973 aaKnown RBP9.81□□□□□ -0.84
YBX3-204ENST00000366290 SH3TC2Q8TF17 1288 aa9.81□□□□□ -0.84
YBX3-204ENST00000366290 PPP1R14AQ96A00 147 aa9.81□□□□□ -0.84
YBX3-204ENST00000366290 CRAMP1Q96RY5 1269 aa9.81□□□□□ -0.84
YBX3-204ENST00000366290 SUGT1Q9Y2Z0 365 aa9.81□□□□□ -0.84
YBX3-204ENST00000366290 TIAM2Q8IVF5 1701 aa9.8□□□□□ -0.84
YBX3-204ENST00000366290 DDX60Q8IY21 1712 aaKnown RBP9.8□□□□□ -0.84
YBX3-204ENST00000366290 GLTPD2A6NH11 291 aa9.8□□□□□ -0.84
YBX3-204ENST00000366290 TGFB1P01137 390 aa9.8□□□□□ -0.84
YBX3-204ENST00000366290 TWISTNBQ3B726 338 aaPredicted RBP9.8□□□□□ -0.84
YBX3-204ENST00000366290 NOL9Q5SY16 702 aaKnown RBP9.8□□□□□ -0.84
YBX3-204ENST00000366290 TMC3Q7Z5M5 1100 aa9.8□□□□□ -0.84
YBX3-204ENST00000366290 LRRC47Q8N1G4 583 aaKnown RBP9.8□□□□□ -0.84
YBX3-204ENST00000366290 BRF1Q92994 677 aa9.8□□□□□ -0.84
YBX3-204ENST00000366290 SGSM3Q96HU1 749 aa9.8□□□□□ -0.84
YBX3-204ENST00000366290 SPATA9Q9BWV2 254 aa9.8□□□□□ -0.84
YBX3-204ENST00000366290 MYH16Q9H6N6 1097 aa9.8□□□□□ -0.84
YBX3-204ENST00000366290 KANSL2Q9H9L4 492 aa9.8□□□□□ -0.84
YBX3-204ENST00000366290 LRRC4CQ9HCJ2 640 aa9.8□□□□□ -0.84
YBX3-204ENST00000366290 GFOD1Q9NXC2 390 aa9.8□□□□□ -0.84
YBX3-204ENST00000366290 PRR13Q9NZ81 148 aa9.8□□□□□ -0.84
YBX3-204ENST00000366290 LRP2BPQ9P2M1 347 aa9.8□□□□□ -0.84
YBX3-204ENST00000366290 FHOD1Q9Y613 1164 aa9.8□□□□□ -0.84
YBX3-204ENST00000366290 SH3TC1Q8TE82 1336 aa9.8□□□□□ -0.84
Retrieved 100 of 20,778 RNA–protein pairs in 97.4 ms