RNA–Protein interactions for RNA: ENST00000366159.8

TNFRSF1A-202, Transcript of TNF receptor superfamily member 1A, humanhuman

TSL 1 (best) BASIC

Gene TNFRSF1A, Length 1,339 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFRSF1A-202ENST00000366159 ARHGEF15O94989 841 aa15.66■□□□□ 0.1
TNFRSF1A-202ENST00000366159 REC8O95072 547 aa15.66■□□□□ 0.1
TNFRSF1A-202ENST00000366159 CA3P07451 260 aa15.66■□□□□ 0.1
TNFRSF1A-202ENST00000366159 TCF7P36402 384 aaPredicted RBP15.66■□□□□ 0.1
TNFRSF1A-202ENST00000366159 METAP2P50579 478 aaKnown RBP eCLIP15.66■□□□□ 0.1
TNFRSF1A-202ENST00000366159 NTRK3Q16288 839 aa15.66■□□□□ 0.1
TNFRSF1A-202ENST00000366159 PKN1Q16512 942 aa15.66■□□□□ 0.1
TNFRSF1A-202ENST00000366159 PPP2R2DQ66LE6 453 aa15.66■□□□□ 0.1
TNFRSF1A-202ENST00000366159 BLOC1S2Q6QNY1 142 aa15.66■□□□□ 0.1
TNFRSF1A-202ENST00000366159 CRYGNQ8WXF5 182 aa15.66■□□□□ 0.1
TNFRSF1A-202ENST00000366159 SEPT1Q8WYJ6 367 aa15.66■□□□□ 0.1
TNFRSF1A-202ENST00000366159 GAS2L1Q99501 681 aaPredicted RBP15.66■□□□□ 0.1
TNFRSF1A-202ENST00000366159 MXRA8Q9BRK3 442 aa15.66■□□□□ 0.1
TNFRSF1A-202ENST00000366159 KCNH7Q9NS40 1196 aa15.66■□□□□ 0.1
TNFRSF1A-202ENST00000366159 SETD4Q9NVD3 440 aa15.66■□□□□ 0.1
TNFRSF1A-202ENST00000366159 XIRP2A4UGR9 3374 aa15.65■□□□□ 0.1
TNFRSF1A-202ENST00000366159 CCDC196A0A1B0GTZ2 297 aa15.65■□□□□ 0.1
TNFRSF1A-202ENST00000366159 ABHD14A-ACY1A0A1B0GW23 586 aa15.65■□□□□ 0.1
TNFRSF1A-202ENST00000366159 RSPH10B2B2RC85 870 aa15.65■□□□□ 0.1
TNFRSF1A-202ENST00000366159 RSPH10BP0C881 870 aa15.65■□□□□ 0.1
TNFRSF1A-202ENST00000366159 SREBF1P36956 1147 aa15.65■□□□□ 0.1
TNFRSF1A-202ENST00000366159 THPOP40225 353 aa15.65■□□□□ 0.1
TNFRSF1A-202ENST00000366159 ADCY7P51828 1080 aa15.65■□□□□ 0.1
TNFRSF1A-202ENST00000366159 DEFB103AP81534 67 aa15.65■□□□□ 0.1
TNFRSF1A-202ENST00000366159 UTP14CQ5TAP6 766 aaKnown RBP15.65■□□□□ 0.1
TNFRSF1A-202ENST00000366159 RPAINQ86UA6 219 aa15.65■□□□□ 0.1
TNFRSF1A-202ENST00000366159 PGBD1Q96JS3 809 aa15.65■□□□□ 0.1
TNFRSF1A-202ENST00000366159 PCYT2Q99447 389 aa15.65■□□□□ 0.1
TNFRSF1A-202ENST00000366159 ANO3Q9BYT9 981 aa15.65■□□□□ 0.1
TNFRSF1A-202ENST00000366159 OSBPL7Q9BZF2 842 aa15.65■□□□□ 0.1
TNFRSF1A-202ENST00000366159 GLT8D2Q9H1C3 349 aa15.65■□□□□ 0.1
TNFRSF1A-202ENST00000366159 EHMT1Q9H9B1 1298 aa15.65■□□□□ 0.1
TNFRSF1A-202ENST00000366159 ZNF215Q9UL58 517 aaPredicted RBP15.65■□□□□ 0.1
TNFRSF1A-202ENST00000366159 EMSYQ7Z589 1322 aa15.64■□□□□ 0.09
TNFRSF1A-202ENST00000366159 NRCAMQ92823 1304 aa15.64■□□□□ 0.09
TNFRSF1A-202ENST00000366159 ESYT2A0FGR8 921 aa15.64■□□□□ 0.09
TNFRSF1A-202ENST00000366159 MEIS1O00470 390 aa15.64■□□□□ 0.09
TNFRSF1A-202ENST00000366159 ADAMTS3O15072 1205 aa15.64■□□□□ 0.09
TNFRSF1A-202ENST00000366159 PRPF3O43395 683 aaKnown RBP15.64■□□□□ 0.09
TNFRSF1A-202ENST00000366159 LGR5O75473 907 aa15.64■□□□□ 0.09
TNFRSF1A-202ENST00000366159 GNAT1P11488 350 aa15.64■□□□□ 0.09
TNFRSF1A-202ENST00000366159 SCG2P13521 617 aa15.64■□□□□ 0.09
TNFRSF1A-202ENST00000366159 POU3F3P20264 500 aaPredicted RBP15.64■□□□□ 0.09
TNFRSF1A-202ENST00000366159 SP4Q02446 784 aa15.64■□□□□ 0.09
TNFRSF1A-202ENST00000366159 TAP1Q03518 808 aa15.64■□□□□ 0.09
TNFRSF1A-202ENST00000366159 AP3B2Q13367 1082 aa15.64■□□□□ 0.09
TNFRSF1A-202ENST00000366159 CEP55Q53EZ4 464 aa15.64■□□□□ 0.09
TNFRSF1A-202ENST00000366159 PLEKHG4Q58EX7 1191 aa15.64■□□□□ 0.09
TNFRSF1A-202ENST00000366159 FAM26DQ5JW98 314 aa15.64■□□□□ 0.09
TNFRSF1A-202ENST00000366159 LMBR1Q8WVP7 490 aa15.64■□□□□ 0.09
TNFRSF1A-202ENST00000366159 ZMYND12Q9H0C1 365 aa15.64■□□□□ 0.09
TNFRSF1A-202ENST00000366159 ZSWIM6Q9HCJ5 1215 aa15.64■□□□□ 0.09
TNFRSF1A-202ENST00000366159 TMEM260Q9NX78 707 aa15.64■□□□□ 0.09
TNFRSF1A-202ENST00000366159 NFASCO94856 1347 aa15.63■□□□□ 0.09
TNFRSF1A-202ENST00000366159 EFCAB14O75071 495 aa15.63■□□□□ 0.09
TNFRSF1A-202ENST00000366159 ATG7O95352 703 aa15.63■□□□□ 0.09
TNFRSF1A-202ENST00000366159 ARP10275 920 aa15.63■□□□□ 0.09
TNFRSF1A-202ENST00000366159 PSMA5P28066 241 aa15.63■□□□□ 0.09
TNFRSF1A-202ENST00000366159 KCNJ6P48051 423 aa15.63■□□□□ 0.09
TNFRSF1A-202ENST00000366159 FGD1P98174 961 aa15.63■□□□□ 0.09
TNFRSF1A-202ENST00000366159 ITGB3BPQ13352 177 aaPredicted RBP15.63■□□□□ 0.09
TNFRSF1A-202ENST00000366159 TOB2Q14106 344 aaPredicted RBP15.63■□□□□ 0.09
TNFRSF1A-202ENST00000366159 IKBKEQ14164 716 aa15.63■□□□□ 0.09
TNFRSF1A-202ENST00000366159 MARCH8Q5T0T0 291 aa15.63■□□□□ 0.09
TNFRSF1A-202ENST00000366159 NIPA1Q7RTP0 329 aa15.63■□□□□ 0.09
TNFRSF1A-202ENST00000366159 TMCO2Q7Z6W1 182 aaPredicted RBP15.63■□□□□ 0.09
TNFRSF1A-202ENST00000366159 DBF4BQ8NFT6 615 aa15.63■□□□□ 0.09
TNFRSF1A-202ENST00000366159 COL25A1Q9BXS0 654 aaPredicted RBP15.63■□□□□ 0.09
TNFRSF1A-202ENST00000366159 MYO9BQ13459 2157 aa15.63■□□□□ 0.09
TNFRSF1A-202ENST00000366159 IGLV3-22A0A075B6J6 115 aa15.62■□□□□ 0.09
TNFRSF1A-202ENST00000366159 MBLAC1A4D2B0 266 aaPredicted RBP15.62■□□□□ 0.09
TNFRSF1A-202ENST00000366159 EPOPA6NHQ4 379 aa15.62■□□□□ 0.09
TNFRSF1A-202ENST00000366159 KIF28PB7ZC32 967 aa15.62■□□□□ 0.09
TNFRSF1A-202ENST00000366159 GJB5O95377 273 aa15.62■□□□□ 0.09
TNFRSF1A-202ENST00000366159 CYP3A4P08684 503 aa15.62■□□□□ 0.09
TNFRSF1A-202ENST00000366159 IFNAR1P17181 557 aa15.62■□□□□ 0.09
TNFRSF1A-202ENST00000366159 PDIA3P30101 505 aaKnown RBP15.62■□□□□ 0.09
TNFRSF1A-202ENST00000366159 RUFY3Q7L099 469 aa15.62■□□□□ 0.09
TNFRSF1A-202ENST00000366159 SMARCAD1Q9H4L7 1026 aa15.62■□□□□ 0.09
TNFRSF1A-202ENST00000366159 AGO4Q9HCK5 861 aaKnown RBP15.62■□□□□ 0.09
TNFRSF1A-202ENST00000366159 JPH1Q9HDC5 661 aaPredicted RBP15.62■□□□□ 0.09
TNFRSF1A-202ENST00000366159 ERAP1Q9NZ08 941 aa15.62■□□□□ 0.09
TNFRSF1A-202ENST00000366159 PKD2L1Q9P0L9 805 aa15.62■□□□□ 0.09
TNFRSF1A-202ENST00000366159 SLC9A2Q9UBY0 812 aa15.62■□□□□ 0.09
TNFRSF1A-202ENST00000366159 MUC3AQ02505 3323 aa15.62■□□□□ 0.09
TNFRSF1A-202ENST00000366159 IGKV6D-21A0A0A0MT36 114 aa15.61■□□□□ 0.09
TNFRSF1A-202ENST00000366159 LCHNA4D1U4 455 aa15.61■□□□□ 0.09
TNFRSF1A-202ENST00000366159 FAM86B1E9PN63 330 aa15.61■□□□□ 0.09
TNFRSF1A-202ENST00000366159 FAM86B2P0C5J1 330 aa15.61■□□□□ 0.09
TNFRSF1A-202ENST00000366159 ARHGAP4P98171 946 aa15.61■□□□□ 0.09
TNFRSF1A-202ENST00000366159 LIN28BQ6ZN17 250 aaKnown RBP eCLIP15.61■□□□□ 0.09
TNFRSF1A-202ENST00000366159 RUFY4Q6ZNE9 571 aa15.61■□□□□ 0.09
TNFRSF1A-202ENST00000366159 SPRED2Q7Z698 418 aa15.61■□□□□ 0.09
TNFRSF1A-202ENST00000366159 PHKBQ93100 1093 aa15.61■□□□□ 0.09
TNFRSF1A-202ENST00000366159 RAD9AQ99638 391 aa15.61■□□□□ 0.09
TNFRSF1A-202ENST00000366159 RNF26Q9BY78 433 aaPredicted RBP15.61■□□□□ 0.09
TNFRSF1A-202ENST00000366159 TM6SF1Q9BZW5 370 aa15.61■□□□□ 0.09
TNFRSF1A-202ENST00000366159 MICAL3Q7RTP6 2002 aa15.61■□□□□ 0.09
TNFRSF1A-202ENST00000366159 RFXAPO00287 272 aa15.6■□□□□ 0.09
TNFRSF1A-202ENST00000366159 DHX15O43143 795 aaKnown RBP15.6■□□□□ 0.09
Retrieved 100 of 20,778 RNA–protein pairs in 17.1 ms