RNA–Protein interactions for RNA: ENST00000365563.1

RNU6-54P-201, Transcript of RNA, U6 small nuclear 54, pseudogene, humanhuman

BASIC

Gene RNU6-54P, Length 107 nt, Biotype snRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU6-54P-201ENST00000365563 BLOC1S1P78537 153 aa0.84□□□□□ -2.27
RNU6-54P-201ENST00000365563 SMAD3P84022 425 aaKnown RBP0.84□□□□□ -2.27
RNU6-54P-201ENST00000365563 ARHGAP4P98171 946 aa0.84□□□□□ -2.27
RNU6-54P-201ENST00000365563 ATP2B2Q01814 1243 aa0.84□□□□□ -2.27
RNU6-54P-201ENST00000365563 MAP3K11Q16584 847 aa0.84□□□□□ -2.27
RNU6-54P-201ENST00000365563 PLEKHG4Q58EX7 1191 aa0.84□□□□□ -2.27
RNU6-54P-201ENST00000365563 ZNF628Q5EBL2 1059 aa0.84□□□□□ -2.27
RNU6-54P-201ENST00000365563 RABL3Q5HYI8 236 aa0.84□□□□□ -2.27
RNU6-54P-201ENST00000365563 ALG1LQ6GMV1 187 aa0.84□□□□□ -2.27
RNU6-54P-201ENST00000365563 KIAA1161Q6NSJ0 714 aa0.84□□□□□ -2.27
RNU6-54P-201ENST00000365563 FBXL22Q6P050 247 aa0.84□□□□□ -2.27
RNU6-54P-201ENST00000365563 Q6YL49 198 aa0.84□□□□□ -2.27
RNU6-54P-201ENST00000365563 CCDC144CPQ8IYA2 1237 aa0.84□□□□□ -2.27
RNU6-54P-201ENST00000365563 LCORLQ8N3X6 602 aa0.84□□□□□ -2.27
RNU6-54P-201ENST00000365563 SIMC1Q8NDZ2 872 aa0.84□□□□□ -2.27
RNU6-54P-201ENST00000365563 MICAL1Q8TDZ2 1067 aa0.84□□□□□ -2.27
RNU6-54P-201ENST00000365563 ADAMTS15Q8TE58 950 aa0.84□□□□□ -2.27
RNU6-54P-201ENST00000365563 GATAD2BQ8WXI9 593 aa0.84□□□□□ -2.27
RNU6-54P-201ENST00000365563 CAVIN3Q969G5 261 aa0.84□□□□□ -2.27
RNU6-54P-201ENST00000365563 CLUAP1Q96AJ1 413 aa0.84□□□□□ -2.27
RNU6-54P-201ENST00000365563 PBXIP1Q96AQ6 731 aa0.84□□□□□ -2.27
RNU6-54P-201ENST00000365563 MIEF2Q96C03 454 aa0.84□□□□□ -2.27
RNU6-54P-201ENST00000365563 DHRS1Q96LJ7 313 aa0.84□□□□□ -2.27
RNU6-54P-201ENST00000365563 COQ10AQ96MF6 247 aa0.84□□□□□ -2.27
RNU6-54P-201ENST00000365563 DUSP26Q9BV47 211 aa0.84□□□□□ -2.27
RNU6-54P-201ENST00000365563 RBCK1Q9BYM8 510 aa0.84□□□□□ -2.27
RNU6-54P-201ENST00000365563 IGSF5Q9NSI5 407 aa0.84□□□□□ -2.27
RNU6-54P-201ENST00000365563 MARCH2Q9P0N8 246 aa0.84□□□□□ -2.27
RNU6-54P-201ENST00000365563 ZFP69BQ9UJL9 534 aa0.84□□□□□ -2.27
RNU6-54P-201ENST00000365563 COA3Q9Y2R0 106 aaPredicted RBP0.84□□□□□ -2.27
RNU6-54P-201ENST00000365563 SETD1BQ9UPS6 1966 aaKnown RBP0.84□□□□□ -2.28
RNU6-54P-201ENST00000365563 IGKV2D-30A0A075B6S6 120 aa0.83□□□□□ -2.28
RNU6-54P-201ENST00000365563 PMS2P1A4D2B8 440 aa0.83□□□□□ -2.28
RNU6-54P-201ENST00000365563 GOLGA6L6A8MZA4 724 aa0.83□□□□□ -2.28
RNU6-54P-201ENST00000365563 C22orf46C9J442 243 aa0.83□□□□□ -2.28
RNU6-54P-201ENST00000365563 MATN2O00339 956 aa0.83□□□□□ -2.28
RNU6-54P-201ENST00000365563 MAFKO60675 156 aa0.83□□□□□ -2.28
RNU6-54P-201ENST00000365563 DNAJA2O60884 412 aa0.83□□□□□ -2.28
RNU6-54P-201ENST00000365563 RECQL4O94761 1208 aa0.83□□□□□ -2.28
RNU6-54P-201ENST00000365563 IGLV2-14P01704 120 aa0.83□□□□□ -2.28
RNU6-54P-201ENST00000365563 CAPNS1P04632 268 aa0.83□□□□□ -2.28
RNU6-54P-201ENST00000365563 HKR1P10072 659 aa0.83□□□□□ -2.28
RNU6-54P-201ENST00000365563 ITGA4P13612 1032 aa0.83□□□□□ -2.28
RNU6-54P-201ENST00000365563 LAG3P18627 525 aa0.83□□□□□ -2.28
RNU6-54P-201ENST00000365563 POLR2BP30876 1174 aaKnown RBP0.83□□□□□ -2.28
RNU6-54P-201ENST00000365563 ETV4P43268 484 aa0.83□□□□□ -2.28
RNU6-54P-201ENST00000365563 SCNN1GP51170 649 aa0.83□□□□□ -2.28
RNU6-54P-201ENST00000365563 VPS72Q15906 364 aa0.83□□□□□ -2.28
RNU6-54P-201ENST00000365563 KRT71Q3SY84 523 aa0.83□□□□□ -2.28
RNU6-54P-201ENST00000365563 OVOS1Q6IE37 1185 aa0.83□□□□□ -2.28
RNU6-54P-201ENST00000365563 B4GALNT3Q6L9W6 998 aa0.83□□□□□ -2.28
RNU6-54P-201ENST00000365563 Q6ZRM9 215 aa0.83□□□□□ -2.28
RNU6-54P-201ENST00000365563 Q6ZTC4 211 aa0.83□□□□□ -2.28
RNU6-54P-201ENST00000365563 USP30Q70CQ3 517 aa0.83□□□□□ -2.28
RNU6-54P-201ENST00000365563 NLRC3Q7RTR2 1065 aa0.83□□□□□ -2.28
RNU6-54P-201ENST00000365563 PTF1AQ7RTS3 328 aa0.83□□□□□ -2.28
RNU6-54P-201ENST00000365563 FAM98AQ8NCA5 519 aaKnown RBP0.83□□□□□ -2.28
RNU6-54P-201ENST00000365563 SHCBP1Q8NEM2 672 aa0.83□□□□□ -2.28
RNU6-54P-201ENST00000365563 PHOSPHO1Q8TCT1 267 aa0.83□□□□□ -2.28
RNU6-54P-201ENST00000365563 PLEKHO2Q8TD55 490 aa0.83□□□□□ -2.28
RNU6-54P-201ENST00000365563 ZNF384Q8TF68 577 aa0.83□□□□□ -2.28
RNU6-54P-201ENST00000365563 RNF34Q969K3 372 aa0.83□□□□□ -2.28
RNU6-54P-201ENST00000365563 TMEM176AQ96HP8 235 aa0.83□□□□□ -2.28
RNU6-54P-201ENST00000365563 ZDHHC15Q96MV8 337 aa0.83□□□□□ -2.28
RNU6-54P-201ENST00000365563 SLC6A18Q96N87 628 aa0.83□□□□□ -2.28
RNU6-54P-201ENST00000365563 FRMD6Q96NE9 622 aa0.83□□□□□ -2.28
RNU6-54P-201ENST00000365563 FAM193BQ96PV7 902 aaPredicted RBP0.83□□□□□ -2.28
RNU6-54P-201ENST00000365563 GPR87Q9BY21 358 aa0.83□□□□□ -2.28
RNU6-54P-201ENST00000365563 OSBPL7Q9BZF2 842 aa0.83□□□□□ -2.28
RNU6-54P-201ENST00000365563 CNNM2Q9H8M5 875 aa0.83□□□□□ -2.28
RNU6-54P-201ENST00000365563 KIAA1586Q9HCI6 787 aa0.83□□□□□ -2.28
RNU6-54P-201ENST00000365563 KCND1Q9NSA2 647 aa0.83□□□□□ -2.28
RNU6-54P-201ENST00000365563 HSPBP1Q9NZL4 362 aa0.83□□□□□ -2.28
RNU6-54P-201ENST00000365563 MDFICQ9P1T7 246 aa0.83□□□□□ -2.28
RNU6-54P-201ENST00000365563 ARHGAP20Q9P2F6 1191 aa0.83□□□□□ -2.28
RNU6-54P-201ENST00000365563 PTPN22Q9Y2R2 807 aa0.83□□□□□ -2.28
RNU6-54P-201ENST00000365563 BACE2Q9Y5Z0 518 aa0.83□□□□□ -2.28
RNU6-54P-201ENST00000365563 HS3ST4Q9Y661 456 aa0.83□□□□□ -2.28
RNU6-54P-201ENST00000365563 COL4A3Q01955 1670 aa0.82□□□□□ -2.28
RNU6-54P-201ENST00000365563 CCDC187A0A096LP49 1063 aa0.82□□□□□ -2.28
RNU6-54P-201ENST00000365563 C7orf72A4D263 438 aa0.82□□□□□ -2.28
RNU6-54P-201ENST00000365563 PRSS47A8MTI9 375 aa0.82□□□□□ -2.28
RNU6-54P-201ENST00000365563 STXBP3O00186 592 aa0.82□□□□□ -2.28
RNU6-54P-201ENST00000365563 HGSO14964 777 aaPredicted RBP0.82□□□□□ -2.28
RNU6-54P-201ENST00000365563 AURKAO14965 403 aa0.82□□□□□ -2.28
RNU6-54P-201ENST00000365563 SLC26A4O43511 780 aa0.82□□□□□ -2.28
RNU6-54P-201ENST00000365563 SUSD5O60279 629 aa0.82□□□□□ -2.28
RNU6-54P-201ENST00000365563 PPP1R11O60927 126 aaPredicted RBP0.82□□□□□ -2.28
RNU6-54P-201ENST00000365563 PROP1O75360 226 aa0.82□□□□□ -2.28
RNU6-54P-201ENST00000365563 NTN1O95631 604 aa0.82□□□□□ -2.28
RNU6-54P-201ENST00000365563 LRG1P02750 347 aa0.82□□□□□ -2.28
RNU6-54P-201ENST00000365563 HMGCRP04035 888 aa0.82□□□□□ -2.28
RNU6-54P-201ENST00000365563 GYPEP15421 78 aa0.82□□□□□ -2.28
RNU6-54P-201ENST00000365563 CCKARP32238 428 aa0.82□□□□□ -2.28
RNU6-54P-201ENST00000365563 MEOX1P50221 254 aa0.82□□□□□ -2.28
RNU6-54P-201ENST00000365563 HILS1P60008 231 aa0.82□□□□□ -2.28
RNU6-54P-201ENST00000365563 SRPK2P78362 688 aaKnown RBP0.82□□□□□ -2.28
RNU6-54P-201ENST00000365563 TOP3AQ13472 1001 aaPredicted RBP0.82□□□□□ -2.28
RNU6-54P-201ENST00000365563 FHL3Q13643 280 aa0.82□□□□□ -2.28
RNU6-54P-201ENST00000365563 MPP2Q14168 576 aa0.82□□□□□ -2.28
Retrieved 100 of 20,778 RNA–protein pairs in 26.4 ms