RNA–Protein interactions for RNA: ENST00000362031.8

SNX6-201, Transcript of sorting nexin 6, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SNX6, Length 2,001 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX6-201ENST00000362031 CMA1P23946 247 aa12.11□□□□□ -0.47
SNX6-201ENST00000362031 GRK4P32298 578 aa12.11□□□□□ -0.47
SNX6-201ENST00000362031 LONP1P36776 959 aaKnown RBP12.11□□□□□ -0.47
SNX6-201ENST00000362031 CTCFP49711 727 aaPredicted RBP12.11□□□□□ -0.47
SNX6-201ENST00000362031 ACTR2P61160 394 aa12.11□□□□□ -0.47
SNX6-201ENST00000362031 TNFAIP2Q03169 654 aa12.11□□□□□ -0.47
SNX6-201ENST00000362031 SNW1Q13573 536 aaKnown RBP12.11□□□□□ -0.47
SNX6-201ENST00000362031 ZRSR1Q15695 479 aaKnown RBP12.11□□□□□ -0.47
SNX6-201ENST00000362031 MFSD14CQ5VZR4 134 aa12.11□□□□□ -0.47
SNX6-201ENST00000362031 METTL7BQ6UX53 244 aa12.11□□□□□ -0.47
SNX6-201ENST00000362031 KCNK18Q7Z418 384 aa12.11□□□□□ -0.47
SNX6-201ENST00000362031 PDILTQ8N807 584 aa12.11□□□□□ -0.47
SNX6-201ENST00000362031 FSIP1Q8NA03 581 aa12.11□□□□□ -0.47
SNX6-201ENST00000362031 ZNF579Q8NAF0 562 aaKnown RBP12.11□□□□□ -0.47
SNX6-201ENST00000362031 ENGASEQ8NFI3 743 aa12.11□□□□□ -0.47
SNX6-201ENST00000362031 PNMA5Q96PV4 448 aa12.11□□□□□ -0.47
SNX6-201ENST00000362031 PCYT2Q99447 389 aa12.11□□□□□ -0.47
SNX6-201ENST00000362031 HSD17B14Q9BPX1 270 aa12.11□□□□□ -0.47
SNX6-201ENST00000362031 SLC9A2Q9UBY0 812 aa12.11□□□□□ -0.47
SNX6-201ENST00000362031 HPSEQ9Y251 543 aa12.11□□□□□ -0.47
SNX6-201ENST00000362031 MYADML2A6NDP7 307 aa12.11□□□□□ -0.47
SNX6-201ENST00000362031 CTAGE5O15320 804 aa12.11□□□□□ -0.47
SNX6-201ENST00000362031 NR1I2O75469 434 aa12.11□□□□□ -0.47
SNX6-201ENST00000362031 SLITRK3O94933 977 aa12.11□□□□□ -0.47
SNX6-201ENST00000362031 UBE2HP62256 183 aa12.11□□□□□ -0.47
SNX6-201ENST00000362031 GRB10Q13322 594 aa12.11□□□□□ -0.47
SNX6-201ENST00000362031 CTTNQ14247 550 aaKnown RBP12.11□□□□□ -0.47
SNX6-201ENST00000362031 IQSEC1Q6DN90 963 aa12.11□□□□□ -0.47
SNX6-201ENST00000362031 ABHD15Q6UXT9 468 aa12.11□□□□□ -0.47
SNX6-201ENST00000362031 CATSPER3Q86XQ3 398 aa12.11□□□□□ -0.47
SNX6-201ENST00000362031 DHX37Q8IY37 1157 aaKnown RBP12.11□□□□□ -0.47
SNX6-201ENST00000362031 BANK1Q8NDB2 785 aa12.11□□□□□ -0.47
SNX6-201ENST00000362031 DYDC2Q96IM9 177 aa12.11□□□□□ -0.47
SNX6-201ENST00000362031 GPR20Q99678 358 aa12.11□□□□□ -0.47
SNX6-201ENST00000362031 EIF2AK1Q9BQI3 630 aaKnown RBP12.11□□□□□ -0.47
SNX6-201ENST00000362031 SDF4Q9BRK5 362 aa12.11□□□□□ -0.47
SNX6-201ENST00000362031 DISC1Q9NRI5 854 aa12.11□□□□□ -0.47
SNX6-201ENST00000362031 POTEB3A0JP26 581 aa12.1□□□□□ -0.47
SNX6-201ENST00000362031 TMEM150BA6NC51 233 aa12.1□□□□□ -0.47
SNX6-201ENST00000362031 DYNC1LI2O43237 492 aaPredicted RBP12.1□□□□□ -0.47
SNX6-201ENST00000362031 CNGA1P29973 690 aa12.1□□□□□ -0.47
SNX6-201ENST00000362031 PSMC6P62333 389 aa12.1□□□□□ -0.47
SNX6-201ENST00000362031 NEDD9Q14511 834 aa12.1□□□□□ -0.47
SNX6-201ENST00000362031 MTFR1Q15390 333 aa12.1□□□□□ -0.47
SNX6-201ENST00000362031 TMEM266Q2M3C6 531 aa12.1□□□□□ -0.47
SNX6-201ENST00000362031 NAALADL2Q58DX5 795 aa12.1□□□□□ -0.47
SNX6-201ENST00000362031 POTEBQ6S5H4 581 aa12.1□□□□□ -0.47
SNX6-201ENST00000362031 TRIM50Q86XT4 487 aa12.1□□□□□ -0.47
SNX6-201ENST00000362031 CCDC60Q8IWA6 550 aaPredicted RBP12.1□□□□□ -0.47
SNX6-201ENST00000362031 AFG1LQ8WV93 481 aa12.1□□□□□ -0.47
SNX6-201ENST00000362031 SPATA33Q96N06 139 aa12.1□□□□□ -0.47
SNX6-201ENST00000362031 MLXIPQ9HAP2 919 aa12.1□□□□□ -0.47
SNX6-201ENST00000362031 FAM237AA0A1B0GTK4 181 aa12.1□□□□□ -0.47
SNX6-201ENST00000362031 RBAK-RBAKDNI3L0D1 243 aa12.1□□□□□ -0.47
SNX6-201ENST00000362031 ATP4AP20648 1035 aa12.1□□□□□ -0.47
SNX6-201ENST00000362031 ZNF746Q6NUN9 644 aaPredicted RBP12.1□□□□□ -0.47
SNX6-201ENST00000362031 POTEGQ6S5H5 508 aa12.1□□□□□ -0.47
SNX6-201ENST00000362031 TRMT1LQ7Z2T5 733 aaKnown RBP12.1□□□□□ -0.47
SNX6-201ENST00000362031 MIER3Q7Z3K6 550 aa12.1□□□□□ -0.47
SNX6-201ENST00000362031 CABP7Q86V35 215 aa12.1□□□□□ -0.47
SNX6-201ENST00000362031 FMR1NBQ8N0W7 255 aaPredicted RBP12.1□□□□□ -0.47
SNX6-201ENST00000362031 SLAIN1Q8ND83 568 aa12.1□□□□□ -0.47
SNX6-201ENST00000362031 SNX29Q8TEQ0 813 aa12.1□□□□□ -0.47
SNX6-201ENST00000362031 PPP1R13LQ8WUF5 828 aa12.1□□□□□ -0.47
SNX6-201ENST00000362031 MRPS27Q92552 414 aaKnown RBP12.1□□□□□ -0.47
SNX6-201ENST00000362031 KCNH3Q9ULD8 1083 aa12.1□□□□□ -0.47
SNX6-201ENST00000362031 SAMM50Q9Y512 469 aa12.1□□□□□ -0.47
SNX6-201ENST00000362031 WDR81Q562E7 1941 aa12.09□□□□□ -0.47
SNX6-201ENST00000362031 POLR2DO15514 142 aaKnown RBP12.09□□□□□ -0.47
SNX6-201ENST00000362031 SEPT4O43236 478 aa12.09□□□□□ -0.47
SNX6-201ENST00000362031 ZNF862O60290 1169 aa12.09□□□□□ -0.47
SNX6-201ENST00000362031 ATG7O95352 703 aa12.09□□□□□ -0.47
SNX6-201ENST00000362031 PGK1P00558 417 aa12.09□□□□□ -0.47
SNX6-201ENST00000362031 PRMT2P55345 433 aa12.09□□□□□ -0.47
SNX6-201ENST00000362031 BEX3Q00994 111 aa12.09□□□□□ -0.47
SNX6-201ENST00000362031 KRT76Q01546 638 aa12.09□□□□□ -0.47
SNX6-201ENST00000362031 ARHGEF6Q15052 776 aa12.09□□□□□ -0.47
SNX6-201ENST00000362031 E2F4Q16254 413 aa12.09□□□□□ -0.47
SNX6-201ENST00000362031 LONRF3Q496Y0 759 aa12.09□□□□□ -0.47
SNX6-201ENST00000362031 SWSAP1Q6NVH7 229 aa12.09□□□□□ -0.47
SNX6-201ENST00000362031 KCNV1Q6PIU1 500 aa12.09□□□□□ -0.47
SNX6-201ENST00000362031 CTU1Q7Z7A3 348 aaKnown RBP12.09□□□□□ -0.47
SNX6-201ENST00000362031 TRMT44Q8IYL2 757 aaKnown RBP12.09□□□□□ -0.47
SNX6-201ENST00000362031 SH2D3AQ9BRG2 576 aa12.09□□□□□ -0.47
SNX6-201ENST00000362031 CCSER1Q9C0I3 900 aa12.09□□□□□ -0.47
SNX6-201ENST00000362031 FAM184BQ9ULE4 1060 aa12.09□□□□□ -0.47
SNX6-201ENST00000362031 GOLGA6L4A6NEF3 574 aa12.08□□□□□ -0.48
SNX6-201ENST00000362031 WDR64B1ANS9 1081 aa12.08□□□□□ -0.48
SNX6-201ENST00000362031 GH1P01241 217 aa12.08□□□□□ -0.48
SNX6-201ENST00000362031 AKR1A1P14550 325 aa12.08□□□□□ -0.48
SNX6-201ENST00000362031 PLCG1P19174 1290 aa12.08□□□□□ -0.48
SNX6-201ENST00000362031 TCF7P36402 384 aaPredicted RBP12.08□□□□□ -0.48
SNX6-201ENST00000362031 CCT6AP40227 531 aaKnown RBP12.08□□□□□ -0.48
SNX6-201ENST00000362031 UBA7P41226 1012 aa12.08□□□□□ -0.48
SNX6-201ENST00000362031 EPHA7Q15375 998 aa12.08□□□□□ -0.48
SNX6-201ENST00000362031 CSPP1Q1MSJ5 1256 aa12.08□□□□□ -0.48
SNX6-201ENST00000362031 LHX8Q68G74 356 aa12.08□□□□□ -0.48
SNX6-201ENST00000362031 TLK2Q86UE8 772 aa12.08□□□□□ -0.48
SNX6-201ENST00000362031 TPH2Q8IWU9 490 aa12.08□□□□□ -0.48
SNX6-201ENST00000362031 OR6J1Q8NGC5 347 aa12.08□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 23.5 ms