RNA–Protein interactions for RNA: ENST00000361866.7

COL6A1-201, Transcript of collagen type VI alpha 1 chain, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene COL6A1, Length 4,238 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL6A1-201ENST00000361866 TRAPPC11Q7Z392 1133 aa15.13■□□□□ 0.01
COL6A1-201ENST00000361866 HDAC7Q8WUI4 952 aa15.13■□□□□ 0.01
COL6A1-201ENST00000361866 FNBP1Q96RU3 617 aa15.13■□□□□ 0.01
COL6A1-201ENST00000361866 CCT8L2Q96SF2 557 aa15.13■□□□□ 0.01
COL6A1-201ENST00000361866 FBXL5Q9UKA1 691 aa15.13■□□□□ 0.01
COL6A1-201ENST00000361866 BCS1LQ9Y276 419 aa15.13■□□□□ 0.01
COL6A1-201ENST00000361866 BZW2Q9Y6E2 419 aaKnown RBP15.13■□□□□ 0.01
COL6A1-201ENST00000361866 POTEB3A0JP26 581 aa15.13■□□□□ 0.01
COL6A1-201ENST00000361866 GMNCA6NCL1 334 aa15.13■□□□□ 0.01
COL6A1-201ENST00000361866 POTECB2RU33 542 aa15.13■□□□□ 0.01
COL6A1-201ENST00000361866 DOK7Q18PE1 504 aa15.13■□□□□ 0.01
COL6A1-201ENST00000361866 POTEBQ6S5H4 581 aa15.13■□□□□ 0.01
COL6A1-201ENST00000361866 RPAINQ86UA6 219 aa15.13■□□□□ 0.01
COL6A1-201ENST00000361866 NEK9Q8TD19 979 aa15.13■□□□□ 0.01
COL6A1-201ENST00000361866 ATP6V1G3Q96LB4 118 aa15.13■□□□□ 0.01
COL6A1-201ENST00000361866 RABGAP1Q9Y3P9 1069 aa15.13■□□□□ 0.01
COL6A1-201ENST00000361866 HIP1RO75146 1068 aa15.13■□□□□ 0.01
COL6A1-201ENST00000361866 PMS1P54277 932 aaKnown RBP15.13■□□□□ 0.01
COL6A1-201ENST00000361866 HDLBPQ00341 1268 aaKnown RBP15.13■□□□□ 0.01
COL6A1-201ENST00000361866 KIAA0825Q8IV33 1275 aa15.13■□□□□ 0.01
COL6A1-201ENST00000361866 CCDC13Q8IYE1 715 aa15.13■□□□□ 0.01
COL6A1-201ENST00000361866 FAM84BQ96KN1 310 aaPredicted RBP15.13■□□□□ 0.01
COL6A1-201ENST00000361866 IMPG2Q9BZV3 1241 aa15.13■□□□□ 0.01
COL6A1-201ENST00000361866 PNPLA7Q6ZV29 1317 aa15.13■□□□□ 0.01
COL6A1-201ENST00000361866 MEFVO15553 781 aaPredicted RBP15.13■□□□□ 0.01
COL6A1-201ENST00000361866 CASP7P55210 303 aa15.13■□□□□ 0.01
COL6A1-201ENST00000361866 DR1Q01658 176 aa15.13■□□□□ 0.01
COL6A1-201ENST00000361866 STMN2Q93045 179 aa15.13■□□□□ 0.01
COL6A1-201ENST00000361866 PBKQ96KB5 322 aa15.13■□□□□ 0.01
COL6A1-201ENST00000361866 SH2D4AQ9H788 454 aa15.13■□□□□ 0.01
COL6A1-201ENST00000361866 PCDHA6Q9UN73 950 aa15.13■□□□□ 0.01
COL6A1-201ENST00000361866 PCDHA8Q9Y5H6 950 aa15.13■□□□□ 0.01
COL6A1-201ENST00000361866 CDHR2Q9BYE9 1310 aa15.12■□□□□ 0.01
COL6A1-201ENST00000361866 POC1B-GALNT4F8VUJ3 575 aa15.12■□□□□ 0.01
COL6A1-201ENST00000361866 MMEP08473 750 aa15.12■□□□□ 0.01
COL6A1-201ENST00000361866 DLATP10515 647 aaKnown RBP15.12■□□□□ 0.01
COL6A1-201ENST00000361866 GLE1Q53GS7 698 aaKnown RBP15.12■□□□□ 0.01
COL6A1-201ENST00000361866 CDKAL1Q5VV42 579 aa15.12■□□□□ 0.01
COL6A1-201ENST00000361866 NUGGCQ68CJ6 796 aa15.12■□□□□ 0.01
COL6A1-201ENST00000361866 KIFAP3Q92845 792 aa15.12■□□□□ 0.01
COL6A1-201ENST00000361866 MCUR1Q96AQ8 359 aa15.12■□□□□ 0.01
COL6A1-201ENST00000361866 PXDNQ92626 1479 aa15.12■□□□□ 0.01
COL6A1-201ENST00000361866 MYCLP12524 364 aaPredicted RBP15.12■□□□□ 0.01
COL6A1-201ENST00000361866 LSP1P33241 339 aa15.12■□□□□ 0.01
COL6A1-201ENST00000361866 RCAN1P53805 252 aa15.12■□□□□ 0.01
COL6A1-201ENST00000361866 COASYQ13057 564 aa15.12■□□□□ 0.01
COL6A1-201ENST00000361866 PIGOQ8TEQ8 1089 aa15.12■□□□□ 0.01
COL6A1-201ENST00000361866 CEP72Q9P209 647 aa15.12■□□□□ 0.01
COL6A1-201ENST00000361866 ZSCAN5CA6NGD5 496 aaPredicted RBP15.12■□□□□ 0.01
COL6A1-201ENST00000361866 SART1O43290 800 aaKnown RBP15.12■□□□□ 0.01
COL6A1-201ENST00000361866 KCNB1Q14721 858 aa15.12■□□□□ 0.01
COL6A1-201ENST00000361866 LRRC14Q15048 493 aa15.12■□□□□ 0.01
COL6A1-201ENST00000361866 CCDC38Q502W7 563 aa15.12■□□□□ 0.01
COL6A1-201ENST00000361866 FMNL3Q8IVF7 1028 aa15.12■□□□□ 0.01
COL6A1-201ENST00000361866 CEP95Q96GE4 821 aa15.12■□□□□ 0.01
COL6A1-201ENST00000361866 SMC6Q96SB8 1091 aa15.12■□□□□ 0.01
COL6A1-201ENST00000361866 ZMYND12Q9H0C1 365 aa15.12■□□□□ 0.01
COL6A1-201ENST00000361866 TAF1DQ9H5J8 278 aaPredicted RBP15.12■□□□□ 0.01
COL6A1-201ENST00000361866 BARHL2Q9NY43 387 aa15.12■□□□□ 0.01
COL6A1-201ENST00000361866 RASGRF2O14827 1237 aa15.11■□□□□ 0.01
COL6A1-201ENST00000361866 RHOBTB3O94955 611 aa15.11■□□□□ 0.01
COL6A1-201ENST00000361866 ACTN1P12814 892 aa15.11■□□□□ 0.01
COL6A1-201ENST00000361866 FERP16591 822 aa15.11■□□□□ 0.01
COL6A1-201ENST00000361866 KAZNQ674X7 775 aa15.11■□□□□ 0.01
COL6A1-201ENST00000361866 SLFN13Q68D06 897 aa15.11■□□□□ 0.01
COL6A1-201ENST00000361866 CLEC10AQ8IUN9 316 aa15.11■□□□□ 0.01
COL6A1-201ENST00000361866 PPFIBP2Q8ND30 876 aa15.11■□□□□ 0.01
COL6A1-201ENST00000361866 K7ENM7 598 aa15.11■□□□□ 0.01
COL6A1-201ENST00000361866 SUN1O94901 812 aa15.11■□□□□ 0.01
COL6A1-201ENST00000361866 KLRC1P26715 233 aa15.11■□□□□ 0.01
COL6A1-201ENST00000361866 HERVK_113P62684 666 aa15.11■□□□□ 0.01
COL6A1-201ENST00000361866 KCTD19Q17RG1 926 aaPredicted RBP15.11■□□□□ 0.01
COL6A1-201ENST00000361866 CROCCP2Q86T23 111 aa15.11■□□□□ 0.01
COL6A1-201ENST00000361866 DNAAF5Q86Y56 855 aa15.11■□□□□ 0.01
COL6A1-201ENST00000361866 GIMAP8Q8ND71 665 aaPredicted RBP15.11■□□□□ 0.01
COL6A1-201ENST00000361866 RNPC3Q96LT9 517 aaKnown RBP15.11■□□□□ 0.01
COL6A1-201ENST00000361866 MTA3Q9BTC8 594 aa15.11■□□□□ 0.01
COL6A1-201ENST00000361866 PARP2Q9UGN5 583 aa15.11■□□□□ 0.01
COL6A1-201ENST00000361866 AGTPBP1Q9UPW5 1226 aa15.11■□□□□ 0.01
COL6A1-201ENST00000361866 FRMPD1Q5SYB0 1578 aa15.11■□□□□ 0.01
COL6A1-201ENST00000361866 ATF7P17544 494 aaPredicted RBP15.11■□□□□ 0.01
COL6A1-201ENST00000361866 SARSP49591 514 aaKnown RBP15.11■□□□□ 0.01
COL6A1-201ENST00000361866 PPP2R5AQ15172 486 aa15.11■□□□□ 0.01
COL6A1-201ENST00000361866 WDR93Q6P2C0 686 aa15.11■□□□□ 0.01
COL6A1-201ENST00000361866 VPS52Q8N1B4 723 aa15.11■□□□□ 0.01
COL6A1-201ENST00000361866 GUF1Q8N442 669 aaKnown RBP15.11■□□□□ 0.01
COL6A1-201ENST00000361866 RNF10Q8N5U6 811 aaKnown RBP15.11■□□□□ 0.01
COL6A1-201ENST00000361866 CCSER1Q9C0I3 900 aa15.11■□□□□ 0.01
COL6A1-201ENST00000361866 GLT8D2Q9H1C3 349 aa15.11■□□□□ 0.01
COL6A1-201ENST00000361866 MYMKA6NI61 221 aa15.1■□□□□ 0.01
COL6A1-201ENST00000361866 PHF20L1A8MW92 1017 aa15.1■□□□□ 0.01
COL6A1-201ENST00000361866 HOXA13P31271 388 aaPredicted RBP15.1■□□□□ 0.01
COL6A1-201ENST00000361866 PDXDC1Q6P996 788 aa15.1■□□□□ 0.01
COL6A1-201ENST00000361866 LMNTD2Q8IXW0 634 aa15.1■□□□□ 0.01
COL6A1-201ENST00000361866 BSDC1Q9NW68 430 aaPredicted RBP15.1■□□□□ 0.01
COL6A1-201ENST00000361866 POTEFA5A3E0 1075 aa15.1■□□□□ 0.01
COL6A1-201ENST00000361866 POTEIP0CG38 1075 aa15.1■□□□□ 0.01
COL6A1-201ENST00000361866 STAT3P40763 770 aa15.1■□□□□ 0.01
COL6A1-201ENST00000361866 CUL1Q13616 776 aa15.1■□□□□ 0.01
COL6A1-201ENST00000361866 WDR44Q5JSH3 913 aa15.1■□□□□ 0.01
Retrieved 100 of 20,778 RNA–protein pairs in 25 ms