RNA–Protein interactions for RNA: ENST00000361716.7

VAMP1-201, Transcript of vesicle associated membrane protein 1, humanhuman

TSL 1 (best) BASIC

Gene VAMP1, Length 3,449 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VAMP1-201ENST00000361716 KCNK9Q9NPC2 374 aa13.87□□□□□ -0.19
VAMP1-201ENST00000361716 PDS5AQ29RF7 1337 aaKnown RBP13.87□□□□□ -0.19
VAMP1-201ENST00000361716 ABCA3Q99758 1704 aa13.87□□□□□ -0.19
VAMP1-201ENST00000361716 COL5A2P05997 1499 aaPredicted RBP13.87□□□□□ -0.19
VAMP1-201ENST00000361716 UBOX5O94941 541 aa13.87□□□□□ -0.19
VAMP1-201ENST00000361716 CSF1RP07333 972 aa13.87□□□□□ -0.19
VAMP1-201ENST00000361716 ATP11AP98196 1134 aa13.87□□□□□ -0.19
VAMP1-201ENST00000361716 LONP2Q86WA8 852 aa13.87□□□□□ -0.19
VAMP1-201ENST00000361716 RETREG2Q8NC44 543 aa13.87□□□□□ -0.19
VAMP1-201ENST00000361716 XPO6Q96QU8 1125 aaKnown RBP13.87□□□□□ -0.19
VAMP1-201ENST00000361716 PHF20Q9BVI0 1012 aa13.87□□□□□ -0.19
VAMP1-201ENST00000361716 PACSIN1Q9BY11 444 aa13.87□□□□□ -0.19
VAMP1-201ENST00000361716 STK36Q9NRP7 1315 aa13.87□□□□□ -0.19
VAMP1-201ENST00000361716 MYH15Q9Y2K3 1946 aa13.87□□□□□ -0.19
VAMP1-201ENST00000361716 SHBGP04278 402 aa13.87□□□□□ -0.19
VAMP1-201ENST00000361716 KLRC1P26715 233 aa13.87□□□□□ -0.19
VAMP1-201ENST00000361716 ALDH5A1P51649 535 aaPredicted RBP13.87□□□□□ -0.19
VAMP1-201ENST00000361716 POLR2FP61218 127 aaKnown RBP13.87□□□□□ -0.19
VAMP1-201ENST00000361716 XRCC4Q13426 336 aa13.87□□□□□ -0.19
VAMP1-201ENST00000361716 FAM114A1Q8IWE2 563 aa13.87□□□□□ -0.19
VAMP1-201ENST00000361716 C3orf20Q8ND61 904 aa13.87□□□□□ -0.19
VAMP1-201ENST00000361716 ZNF507Q8TCN5 953 aa13.87□□□□□ -0.19
VAMP1-201ENST00000361716 CCT6BQ92526 530 aa13.87□□□□□ -0.19
VAMP1-201ENST00000361716 TATDN2Q93075 761 aa13.87□□□□□ -0.19
VAMP1-201ENST00000361716 DISC1Q9NRI5 854 aa13.87□□□□□ -0.19
VAMP1-201ENST00000361716 MYH13Q9UKX3 1938 aa13.87□□□□□ -0.19
VAMP1-201ENST00000361716 ATXN2Q99700 1313 aaKnown RBP13.87□□□□□ -0.19
VAMP1-201ENST00000361716 MGRN1O60291 552 aa13.86□□□□□ -0.19
VAMP1-201ENST00000361716 IL17AQ16552 155 aa13.86□□□□□ -0.19
VAMP1-201ENST00000361716 MEA1Q16626 185 aa13.86□□□□□ -0.19
VAMP1-201ENST00000361716 PNMA1Q8ND90 353 aa13.86□□□□□ -0.19
VAMP1-201ENST00000361716 P2RX5Q93086 422 aa13.86□□□□□ -0.19
VAMP1-201ENST00000361716 CALML4Q96GE6 196 aa13.86□□□□□ -0.19
VAMP1-201ENST00000361716 NEUROG2Q9H2A3 272 aa13.86□□□□□ -0.19
VAMP1-201ENST00000361716 LUC7LQ9NQ29 371 aaKnown RBP13.86□□□□□ -0.19
VAMP1-201ENST00000361716 GDF3Q9NR23 364 aa13.86□□□□□ -0.19
VAMP1-201ENST00000361716 PRPF3O43395 683 aaKnown RBP13.86□□□□□ -0.19
VAMP1-201ENST00000361716 PRDX5P30044 214 aa13.86□□□□□ -0.19
VAMP1-201ENST00000361716 TNNI2P48788 182 aa13.86□□□□□ -0.19
VAMP1-201ENST00000361716 ATP2C1P98194 919 aaPredicted RBP13.86□□□□□ -0.19
VAMP1-201ENST00000361716 PDXDC2PQ6P474 469 aa13.86□□□□□ -0.19
VAMP1-201ENST00000361716 TMTC3Q6ZXV5 915 aa13.86□□□□□ -0.19
VAMP1-201ENST00000361716 TRIM51Q9BSJ1 452 aa13.86□□□□□ -0.19
VAMP1-201ENST00000361716 THAP9Q9H5L6 903 aa13.86□□□□□ -0.19
VAMP1-201ENST00000361716 UTP3Q9NQZ2 479 aaKnown RBP eCLIP13.86□□□□□ -0.19
VAMP1-201ENST00000361716 BATF3Q9NR55 127 aa13.86□□□□□ -0.19
VAMP1-201ENST00000361716 ROBO1Q9Y6N7 1651 aa13.86□□□□□ -0.19
VAMP1-201ENST00000361716 WDR19Q8NEZ3 1342 aa13.86□□□□□ -0.19
VAMP1-201ENST00000361716 SART1O43290 800 aaKnown RBP13.86□□□□□ -0.19
VAMP1-201ENST00000361716 CRNKL1Q9BZJ0 848 aaKnown RBP13.86□□□□□ -0.19
VAMP1-201ENST00000361716 ARHGEF10LQ9HCE6 1279 aa13.86□□□□□ -0.19
VAMP1-201ENST00000361716 MROH5Q6ZUA9 1318 aa13.85□□□□□ -0.19
VAMP1-201ENST00000361716 RASSF10A6NK89 507 aa13.85□□□□□ -0.19
VAMP1-201ENST00000361716 RGS16O15492 202 aaPredicted RBP13.85□□□□□ -0.19
VAMP1-201ENST00000361716 TTI1O43156 1089 aa13.85□□□□□ -0.19
VAMP1-201ENST00000361716 INHBEP58166 350 aa13.85□□□□□ -0.19
VAMP1-201ENST00000361716 TXNRD1Q16881 649 aa13.85□□□□□ -0.19
VAMP1-201ENST00000361716 TRPM8Q7Z2W7 1104 aa13.85□□□□□ -0.19
VAMP1-201ENST00000361716 GDAP1Q8TB36 358 aa13.85□□□□□ -0.19
VAMP1-201ENST00000361716 NDST4Q9H3R1 872 aa13.85□□□□□ -0.19
VAMP1-201ENST00000361716 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP13.85□□□□□ -0.19
VAMP1-201ENST00000361716 FAM205AQ6ZU69 1335 aa13.85□□□□□ -0.19
VAMP1-201ENST00000361716 KRT13P13646 458 aa13.85□□□□□ -0.19
VAMP1-201ENST00000361716 DRD4P21917 467 aa13.85□□□□□ -0.19
VAMP1-201ENST00000361716 SLC9C1Q4G0N8 1177 aa13.85□□□□□ -0.19
VAMP1-201ENST00000361716 MAPKAPK5Q8IW41 473 aa13.85□□□□□ -0.19
VAMP1-201ENST00000361716 RPUSD2Q8IZ73 545 aaKnown RBP13.85□□□□□ -0.19
VAMP1-201ENST00000361716 AZI2Q9H6S1 392 aa13.85□□□□□ -0.19
VAMP1-201ENST00000361716 AGAP1Q9UPQ3 857 aa13.85□□□□□ -0.19
VAMP1-201ENST00000361716 LAMA4Q16363 1823 aa13.85□□□□□ -0.19
VAMP1-201ENST00000361716 LRRD1A4D1F6 860 aa13.84□□□□□ -0.19
VAMP1-201ENST00000361716 ITGA4P13612 1032 aa13.84□□□□□ -0.19
VAMP1-201ENST00000361716 PLTPP55058 493 aa13.84□□□□□ -0.19
VAMP1-201ENST00000361716 UAP1Q16222 522 aaPredicted RBP13.84□□□□□ -0.19
VAMP1-201ENST00000361716 MIS18BP1Q6P0N0 1132 aa13.84□□□□□ -0.19
VAMP1-201ENST00000361716 FAM133AQ8N9E0 248 aa13.84□□□□□ -0.19
VAMP1-201ENST00000361716 GPR101Q96P66 508 aaPredicted RBP13.84□□□□□ -0.19
VAMP1-201ENST00000361716 BICDL2A1A5D9 508 aa13.84□□□□□ -0.19
VAMP1-201ENST00000361716 HIP1RO75146 1068 aa13.84□□□□□ -0.19
VAMP1-201ENST00000361716 CALML3P27482 149 aa13.84□□□□□ -0.19
VAMP1-201ENST00000361716 NUCKS1Q9H1E3 243 aaKnown RBP13.84□□□□□ -0.19
VAMP1-201ENST00000361716 PAPOLBQ9NRJ5 636 aaKnown RBP13.84□□□□□ -0.19
VAMP1-201ENST00000361716 ANKIB1Q9P2G1 1089 aa13.84□□□□□ -0.19
VAMP1-201ENST00000361716 PKD1L3Q7Z443 1732 aa13.84□□□□□ -0.19
VAMP1-201ENST00000361716 ATP2A2P16615 1042 aaKnown RBP13.84□□□□□ -0.19
VAMP1-201ENST00000361716 ERFP50548 548 aa13.84□□□□□ -0.19
VAMP1-201ENST00000361716 RNASELQ05823 741 aaKnown RBP13.84□□□□□ -0.19
VAMP1-201ENST00000361716 KLHL30Q0D2K2 578 aa13.84□□□□□ -0.19
VAMP1-201ENST00000361716 TROAPQ12815 778 aa13.84□□□□□ -0.19
VAMP1-201ENST00000361716 BIRC3Q13489 604 aa13.84□□□□□ -0.19
VAMP1-201ENST00000361716 BYSLQ13895 437 aaKnown RBP13.84□□□□□ -0.19
VAMP1-201ENST00000361716 ANKRD20A2Q5SQ80 823 aa13.84□□□□□ -0.19
VAMP1-201ENST00000361716 ANKRD20A1Q5TYW2 823 aa13.84□□□□□ -0.19
VAMP1-201ENST00000361716 ANKRD20A3Q5VUR7 823 aa13.84□□□□□ -0.19
VAMP1-201ENST00000361716 PLCB1Q9NQ66 1216 aa13.84□□□□□ -0.19
VAMP1-201ENST00000361716 SEC63Q9UGP8 760 aaKnown RBP13.84□□□□□ -0.19
VAMP1-201ENST00000361716 SLC12A6Q9UHW9 1150 aa13.84□□□□□ -0.19
VAMP1-201ENST00000361716 F8W031 263 aaPredicted RBP13.83□□□□□ -0.19
VAMP1-201ENST00000361716 ORC4O43929 436 aa13.83□□□□□ -0.19
VAMP1-201ENST00000361716 CALM1P0DP23 149 aa13.83□□□□□ -0.19
Retrieved 100 of 20,778 RNA–protein pairs in 21.7 ms