RNA–Protein interactions for RNA: ENST00000361055.8

UBA3-202, Transcript of ubiquitin like modifier activating enzyme 3, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene UBA3, Length 2,154 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBA3-202ENST00000361055 CAPZA3Q96KX2 299 aa13.73□□□□□ -0.21
UBA3-202ENST00000361055 GLIS2Q9BZE0 524 aaPredicted RBP13.73□□□□□ -0.21
UBA3-202ENST00000361055 NMRK2Q9NPI5 230 aa13.73□□□□□ -0.21
UBA3-202ENST00000361055 FEZ2Q9UHY8 353 aaPredicted RBP13.73□□□□□ -0.21
UBA3-202ENST00000361055 SNX12Q9UMY4 172 aa13.73□□□□□ -0.21
UBA3-202ENST00000361055 SIK3Q9Y2K2 1263 aa13.73□□□□□ -0.21
UBA3-202ENST00000361055 DUSP10Q9Y6W6 482 aa13.73□□□□□ -0.21
UBA3-202ENST00000361055 PDE2AO00408 941 aaPredicted RBP13.72□□□□□ -0.21
UBA3-202ENST00000361055 ZNF263O14978 683 aa13.72□□□□□ -0.21
UBA3-202ENST00000361055 PRPF6O94906 941 aaKnown RBP13.72□□□□□ -0.21
UBA3-202ENST00000361055 GOLGA8HP0CJ92 632 aa13.72□□□□□ -0.21
UBA3-202ENST00000361055 EEF2P13639 858 aaKnown RBP13.72□□□□□ -0.21
UBA3-202ENST00000361055 NF2P35240 595 aa13.72□□□□□ -0.21
UBA3-202ENST00000361055 CYP27A1Q02318 531 aa13.72□□□□□ -0.21
UBA3-202ENST00000361055 PDIA5Q14554 519 aa13.72□□□□□ -0.21
UBA3-202ENST00000361055 UNC13DQ70J99 1090 aa13.72□□□□□ -0.21
UBA3-202ENST00000361055 LDHDQ86WU2 507 aa13.72□□□□□ -0.21
UBA3-202ENST00000361055 KIAA0895Q8NCT3 520 aa13.72□□□□□ -0.21
UBA3-202ENST00000361055 CAGE1Q8TC20 777 aa13.72□□□□□ -0.21
UBA3-202ENST00000361055 ZNF526Q8TF50 670 aaPredicted RBP13.72□□□□□ -0.21
UBA3-202ENST00000361055 KLRG1Q96E93 195 aa13.72□□□□□ -0.21
UBA3-202ENST00000361055 CDCA5Q96FF9 252 aa13.72□□□□□ -0.21
UBA3-202ENST00000361055 MTMR9Q96QG7 549 aa13.72□□□□□ -0.21
UBA3-202ENST00000361055 NDST4Q9H3R1 872 aa13.72□□□□□ -0.21
UBA3-202ENST00000361055 JADE2Q9NQC1 790 aa13.72□□□□□ -0.21
UBA3-202ENST00000361055 PCDHA13Q9Y5I0 950 aa13.72□□□□□ -0.21
UBA3-202ENST00000361055 hCG_1984214I3L0E3 225 aa13.72□□□□□ -0.21
UBA3-202ENST00000361055 PPP1R12BO60237 982 aaPredicted RBP13.72□□□□□ -0.21
UBA3-202ENST00000361055 FXR2P51116 673 aaKnown RBP eCLIP13.72□□□□□ -0.21
UBA3-202ENST00000361055 ATP2B2Q01814 1243 aa13.72□□□□□ -0.21
UBA3-202ENST00000361055 PSMD2Q13200 908 aa13.72□□□□□ -0.21
UBA3-202ENST00000361055 DLK2Q6UY11 383 aa13.72□□□□□ -0.21
UBA3-202ENST00000361055 CREG2Q8IUH2 290 aa13.72□□□□□ -0.21
UBA3-202ENST00000361055 GUF1Q8N442 669 aaKnown RBP13.72□□□□□ -0.21
UBA3-202ENST00000361055 ZNF713Q8N859 430 aaPredicted RBP13.72□□□□□ -0.21
UBA3-202ENST00000361055 TBCKQ8TEA7 893 aa13.72□□□□□ -0.21
UBA3-202ENST00000361055 WRNIP1Q96S55 665 aa13.72□□□□□ -0.21
UBA3-202ENST00000361055 LRRC27Q9C0I9 530 aa13.72□□□□□ -0.21
UBA3-202ENST00000361055 FAM204AQ9H8W3 233 aa13.72□□□□□ -0.21
UBA3-202ENST00000361055 SEC63Q9UGP8 760 aaKnown RBP13.72□□□□□ -0.21
UBA3-202ENST00000361055 SYNPO2Q9UMS6 1093 aa13.72□□□□□ -0.21
UBA3-202ENST00000361055 ZNF185O15231 689 aa13.71□□□□□ -0.21
UBA3-202ENST00000361055 RNF40O75150 1001 aa13.71□□□□□ -0.21
UBA3-202ENST00000361055 PHACTR2O75167 634 aa13.71□□□□□ -0.21
UBA3-202ENST00000361055 USP2O75604 605 aaPredicted RBP13.71□□□□□ -0.21
UBA3-202ENST00000361055 TNNT3P45378 269 aaPredicted RBP13.71□□□□□ -0.21
UBA3-202ENST00000361055 GRB10Q13322 594 aa13.71□□□□□ -0.21
UBA3-202ENST00000361055 MAN2A1Q16706 1144 aa13.71□□□□□ -0.21
UBA3-202ENST00000361055 SIAH1Q8IUQ4 282 aa13.71□□□□□ -0.21
UBA3-202ENST00000361055 EEF2KMTQ96G04 330 aa13.71□□□□□ -0.21
UBA3-202ENST00000361055 SH2D4AQ9H788 454 aa13.71□□□□□ -0.21
UBA3-202ENST00000361055 SLC39A2Q9NP94 309 aa13.71□□□□□ -0.21
UBA3-202ENST00000361055 BLOC1S4Q9NUP1 217 aa13.71□□□□□ -0.21
UBA3-202ENST00000361055 ARHGAP20Q9P2F6 1191 aa13.71□□□□□ -0.21
UBA3-202ENST00000361055 LRWD1Q9UFC0 647 aa13.71□□□□□ -0.21
UBA3-202ENST00000361055 PAPPA2Q9BXP8 1791 aa13.71□□□□□ -0.22
UBA3-202ENST00000361055 MACROD2A1Z1Q3 448 aa13.71□□□□□ -0.22
UBA3-202ENST00000361055 PJA2O43164 708 aa13.71□□□□□ -0.22
UBA3-202ENST00000361055 INPP5BP32019 993 aa13.71□□□□□ -0.22
UBA3-202ENST00000361055 LRRC63Q05C16 580 aa13.71□□□□□ -0.22
UBA3-202ENST00000361055 CCDC96Q2M329 555 aa13.71□□□□□ -0.22
UBA3-202ENST00000361055 MAP1SQ66K74 1059 aaPredicted RBP13.71□□□□□ -0.22
UBA3-202ENST00000361055 SCYL3Q8IZE3 742 aa13.71□□□□□ -0.22
UBA3-202ENST00000361055 LRRC47Q8N1G4 583 aaKnown RBP13.71□□□□□ -0.22
UBA3-202ENST00000361055 AFAP1L1Q8TED9 768 aa13.71□□□□□ -0.22
UBA3-202ENST00000361055 IFIH1Q9BYX4 1025 aaKnown RBP13.71□□□□□ -0.22
UBA3-202ENST00000361055 RIOX1Q9H6W3 641 aa13.71□□□□□ -0.22
UBA3-202ENST00000361055 ARHGEF10LQ9HCE6 1279 aa13.71□□□□□ -0.22
UBA3-202ENST00000361055 MTMR7Q9Y216 660 aa13.71□□□□□ -0.22
UBA3-202ENST00000361055 OTOFQ9HC10 1997 aa13.7□□□□□ -0.22
UBA3-202ENST00000361055 MYMKA6NI61 221 aa13.7□□□□□ -0.22
UBA3-202ENST00000361055 TCP1P17987 556 aaKnown RBP13.7□□□□□ -0.22
UBA3-202ENST00000361055 LRRC31Q6UY01 552 aa13.7□□□□□ -0.22
UBA3-202ENST00000361055 SRLQ86TD4 932 aa13.7□□□□□ -0.22
UBA3-202ENST00000361055 REXO1Q8N1G1 1221 aaKnown RBP13.7□□□□□ -0.22
UBA3-202ENST00000361055 DDX55Q8NHQ9 600 aaKnown RBP eCLIP13.7□□□□□ -0.22
UBA3-202ENST00000361055 TRERF1Q96PN7 1200 aa13.7□□□□□ -0.22
UBA3-202ENST00000361055 CRACR2AQ9BSW2 395 aa13.7□□□□□ -0.22
UBA3-202ENST00000361055 RIC8AQ9NPQ8 531 aa13.7□□□□□ -0.22
UBA3-202ENST00000361055 FAM184BQ9ULE4 1060 aa13.7□□□□□ -0.22
UBA3-202ENST00000361055 FZD1Q9UP38 647 aa13.7□□□□□ -0.22
UBA3-202ENST00000361055 MYO1CO00159 1063 aa13.69□□□□□ -0.22
UBA3-202ENST00000361055 EIF4A3P38919 411 aaKnown RBP13.69□□□□□ -0.22
UBA3-202ENST00000361055 TXKP42681 527 aa13.69□□□□□ -0.22
UBA3-202ENST00000361055 KIF11P52732 1056 aa13.69□□□□□ -0.22
UBA3-202ENST00000361055 PRKG1Q13976 671 aa13.69□□□□□ -0.22
UBA3-202ENST00000361055 TMEM266Q2M3C6 531 aa13.69□□□□□ -0.22
UBA3-202ENST00000361055 USP17L2Q6R6M4 530 aa13.69□□□□□ -0.22
UBA3-202ENST00000361055 AENQ8WTP8 325 aaKnown RBP13.69□□□□□ -0.22
UBA3-202ENST00000361055 ZKSCAN4Q969J2 545 aaPredicted RBP13.69□□□□□ -0.22
UBA3-202ENST00000361055 PNMA5Q96PV4 448 aa13.69□□□□□ -0.22
UBA3-202ENST00000361055 SELENOOQ9BVL4 669 aa13.69□□□□□ -0.22
UBA3-202ENST00000361055 RAB34Q9BZG1 259 aa13.69□□□□□ -0.22
UBA3-202ENST00000361055 BIN2Q9UBW5 565 aaPredicted RBP13.69□□□□□ -0.22
UBA3-202ENST00000361055 PHIPQ8WWQ0 1821 aa13.69□□□□□ -0.22
UBA3-202ENST00000361055 PLEKP08567 350 aaPredicted RBP13.69□□□□□ -0.22
UBA3-202ENST00000361055 SNHG28P0DPA3 235 aa13.69□□□□□ -0.22
UBA3-202ENST00000361055 PDHBP11177 359 aa13.69□□□□□ -0.22
UBA3-202ENST00000361055 IREB2P48200 963 aaKnown RBP13.69□□□□□ -0.22
UBA3-202ENST00000361055 CALCRLQ16602 461 aa13.69□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 18.1 ms