RNA–Protein interactions for RNA: ENST00000359683.8

NIF3L1-201, Transcript of NGG1 interacting factor 3 like 1, humanhuman

TSL 1 (best) BASIC

Gene NIF3L1, Length 1,626 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NIF3L1-201ENST00000359683 JPH1Q9HDC5 661 aaPredicted RBP13.98□□□□□ -0.17
NIF3L1-201ENST00000359683 HMX1Q9NP08 348 aaPredicted RBP13.98□□□□□ -0.17
NIF3L1-201ENST00000359683 SLC9A2Q9UBY0 812 aa13.98□□□□□ -0.17
NIF3L1-201ENST00000359683 VWA3AA6NCI4 1184 aa13.97□□□□□ -0.17
NIF3L1-201ENST00000359683 DDX39AO00148 427 aaKnown RBP13.97□□□□□ -0.17
NIF3L1-201ENST00000359683 CUTAO60888 179 aa13.97□□□□□ -0.17
NIF3L1-201ENST00000359683 ATG7O95352 703 aa13.97□□□□□ -0.17
NIF3L1-201ENST00000359683 CCNE2O96020 404 aa13.97□□□□□ -0.17
NIF3L1-201ENST00000359683 PTGS1P23219 599 aa13.97□□□□□ -0.17
NIF3L1-201ENST00000359683 LONP1P36776 959 aaKnown RBP13.97□□□□□ -0.17
NIF3L1-201ENST00000359683 ME1P48163 572 aa13.97□□□□□ -0.17
NIF3L1-201ENST00000359683 CSPP1Q1MSJ5 1256 aa13.97□□□□□ -0.17
NIF3L1-201ENST00000359683 ZNF579Q8NAF0 562 aaKnown RBP13.97□□□□□ -0.17
NIF3L1-201ENST00000359683 TMEM87AQ8NBN3 555 aa13.97□□□□□ -0.17
NIF3L1-201ENST00000359683 CLIC6Q96NY7 704 aa13.97□□□□□ -0.17
NIF3L1-201ENST00000359683 GBP4Q96PP9 640 aa13.97□□□□□ -0.17
NIF3L1-201ENST00000359683 BRCA2P51587 3418 aa13.97□□□□□ -0.17
NIF3L1-201ENST00000359683 EML1O00423 815 aa13.97□□□□□ -0.17
NIF3L1-201ENST00000359683 DYNC1LI2O43237 492 aaPredicted RBP13.97□□□□□ -0.17
NIF3L1-201ENST00000359683 NKX3-2P78367 333 aa13.97□□□□□ -0.17
NIF3L1-201ENST00000359683 ADALQ6DHV7 355 aa13.97□□□□□ -0.17
NIF3L1-201ENST00000359683 RDM1Q8NG50 284 aa13.97□□□□□ -0.17
NIF3L1-201ENST00000359683 AK8Q96MA6 479 aa13.97□□□□□ -0.17
NIF3L1-201ENST00000359683 RAB34Q9BZG1 259 aa13.97□□□□□ -0.17
NIF3L1-201ENST00000359683 CSRNP2Q9H175 543 aa13.97□□□□□ -0.17
NIF3L1-201ENST00000359683 DDX20Q9UHI6 824 aaKnown RBP13.97□□□□□ -0.17
NIF3L1-201ENST00000359683 TELO2Q9Y4R8 837 aa13.97□□□□□ -0.17
NIF3L1-201ENST00000359683 DOCK5Q9H7D0 1870 aa13.96□□□□□ -0.17
NIF3L1-201ENST00000359683 MKI67P46013 3256 aaKnown RBP13.96□□□□□ -0.17
NIF3L1-201ENST00000359683 GSTTP1A0A1W2PQM5 241 aa13.96□□□□□ -0.17
NIF3L1-201ENST00000359683 POTEMA6NI47 508 aa13.96□□□□□ -0.17
NIF3L1-201ENST00000359683 SORBS3O60504 671 aa13.96□□□□□ -0.17
NIF3L1-201ENST00000359683 MSCO60682 206 aa13.96□□□□□ -0.17
NIF3L1-201ENST00000359683 SFNP31947 248 aa13.96□□□□□ -0.17
NIF3L1-201ENST00000359683 ACTR2P61160 394 aa13.96□□□□□ -0.17
NIF3L1-201ENST00000359683 EPHA7Q15375 998 aa13.96□□□□□ -0.17
NIF3L1-201ENST00000359683 HSDL1Q3SXM5 330 aa13.96□□□□□ -0.17
NIF3L1-201ENST00000359683 ABHD15Q6UXT9 468 aa13.96□□□□□ -0.17
NIF3L1-201ENST00000359683 SMAP1Q8IYB5 467 aaPredicted RBP13.96□□□□□ -0.17
NIF3L1-201ENST00000359683 OR6J1Q8NGC5 347 aa13.96□□□□□ -0.17
NIF3L1-201ENST00000359683 SEPT1Q8WYJ6 367 aa13.96□□□□□ -0.17
NIF3L1-201ENST00000359683 SPATA33Q96N06 139 aa13.96□□□□□ -0.17
NIF3L1-201ENST00000359683 GPR20Q99678 358 aa13.96□□□□□ -0.17
NIF3L1-201ENST00000359683 UPF3AQ9H1J1 476 aaKnown RBP13.96□□□□□ -0.17
NIF3L1-201ENST00000359683 DISC1Q9NRI5 854 aa13.96□□□□□ -0.17
NIF3L1-201ENST00000359683 LRWD1Q9UFC0 647 aa13.96□□□□□ -0.17
NIF3L1-201ENST00000359683 A6NJR5 290 aa13.95□□□□□ -0.18
NIF3L1-201ENST00000359683 WDR64B1ANS9 1081 aa13.95□□□□□ -0.18
NIF3L1-201ENST00000359683 RARBP10826 455 aa13.95□□□□□ -0.18
NIF3L1-201ENST00000359683 JAK3P52333 1124 aa13.95□□□□□ -0.18
NIF3L1-201ENST00000359683 GJA9P57773 515 aa13.95□□□□□ -0.18
NIF3L1-201ENST00000359683 MTFR1Q15390 333 aa13.95□□□□□ -0.18
NIF3L1-201ENST00000359683 LHX8Q68G74 356 aa13.95□□□□□ -0.18
NIF3L1-201ENST00000359683 NCAPH2Q6IBW4 605 aa13.95□□□□□ -0.18
NIF3L1-201ENST00000359683 MIER3Q7Z3K6 550 aa13.95□□□□□ -0.18
NIF3L1-201ENST00000359683 TLK2Q86UE8 772 aa13.95□□□□□ -0.18
NIF3L1-201ENST00000359683 PPTC7Q8NI37 304 aa13.95□□□□□ -0.18
NIF3L1-201ENST00000359683 AFG1LQ8WV93 481 aa13.95□□□□□ -0.18
NIF3L1-201ENST00000359683 LENG1Q96BZ8 264 aaPredicted RBP13.95□□□□□ -0.18
NIF3L1-201ENST00000359683 XRN2Q9H0D6 950 aaKnown RBP eCLIP13.95□□□□□ -0.18
NIF3L1-201ENST00000359683 AP5M1Q9H0R1 490 aa13.95□□□□□ -0.18
NIF3L1-201ENST00000359683 UNC93B1Q9H1C4 597 aa13.95□□□□□ -0.18
NIF3L1-201ENST00000359683 PAK6Q9NQU5 681 aaPredicted RBP13.95□□□□□ -0.18
NIF3L1-201ENST00000359683 TCEAL9Q9UHQ7 104 aa13.95□□□□□ -0.18
NIF3L1-201ENST00000359683 PCDHA10Q9Y5I2 948 aa13.95□□□□□ -0.18
NIF3L1-201ENST00000359683 STK24Q9Y6E0 443 aa13.95□□□□□ -0.18
NIF3L1-201ENST00000359683 IGKV6D-21A0A0A0MT36 114 aa13.94□□□□□ -0.18
NIF3L1-201ENST00000359683 A0A1W2PQ27 194 aa13.94□□□□□ -0.18
NIF3L1-201ENST00000359683 A0A1W2PQ64 194 aa13.94□□□□□ -0.18
NIF3L1-201ENST00000359683 A0A1W2PQD8 194 aa13.94□□□□□ -0.18
NIF3L1-201ENST00000359683 CTAGE5O15320 804 aa13.94□□□□□ -0.18
NIF3L1-201ENST00000359683 CHMP2AO43633 222 aa13.94□□□□□ -0.18
NIF3L1-201ENST00000359683 PPFIA4O75335 1185 aa13.94□□□□□ -0.18
NIF3L1-201ENST00000359683 HOXD8P13378 290 aaPredicted RBP13.94□□□□□ -0.18
NIF3L1-201ENST00000359683 SHC4Q6S5L8 630 aa13.94□□□□□ -0.18
NIF3L1-201ENST00000359683 HSD17B14Q9BPX1 270 aa13.94□□□□□ -0.18
NIF3L1-201ENST00000359683 MMTAG2Q9BU76 263 aaKnown RBP13.94□□□□□ -0.18
NIF3L1-201ENST00000359683 PP2D1A8MPX8 630 aa13.93□□□□□ -0.18
NIF3L1-201ENST00000359683 NOP56O00567 594 aaKnown RBP13.93□□□□□ -0.18
NIF3L1-201ENST00000359683 ADAMTS4O75173 837 aa13.93□□□□□ -0.18
NIF3L1-201ENST00000359683 PSAPP07602 524 aa13.93□□□□□ -0.18
NIF3L1-201ENST00000359683 SUPT20HL2P0C7V6 817 aa13.93□□□□□ -0.18
NIF3L1-201ENST00000359683 CCL5P13501 91 aa13.93□□□□□ -0.18
NIF3L1-201ENST00000359683 CMA1P23946 247 aa13.93□□□□□ -0.18
NIF3L1-201ENST00000359683 CDC25AP30304 524 aa13.93□□□□□ -0.18
NIF3L1-201ENST00000359683 SP4Q02446 784 aa13.93□□□□□ -0.18
NIF3L1-201ENST00000359683 SPECC1Q5M775 1068 aa13.93□□□□□ -0.18
NIF3L1-201ENST00000359683 MIS18BP1Q6P0N0 1132 aa13.93□□□□□ -0.18
NIF3L1-201ENST00000359683 USP49Q70CQ1 688 aa13.93□□□□□ -0.18
NIF3L1-201ENST00000359683 EPSTI1Q96J88 318 aa13.93□□□□□ -0.18
NIF3L1-201ENST00000359683 EIF2AK1Q9BQI3 630 aaKnown RBP13.93□□□□□ -0.18
NIF3L1-201ENST00000359683 CCSER1Q9C0I3 900 aa13.93□□□□□ -0.18
NIF3L1-201ENST00000359683 SAMM50Q9Y512 469 aa13.93□□□□□ -0.18
NIF3L1-201ENST00000359683 SYNRGQ9UMZ2 1314 aa13.93□□□□□ -0.18
NIF3L1-201ENST00000359683 SLC26A4O43511 780 aa13.93□□□□□ -0.18
NIF3L1-201ENST00000359683 PRPF40AO75400 957 aaKnown RBP13.93□□□□□ -0.18
NIF3L1-201ENST00000359683 LGR5O75473 907 aa13.93□□□□□ -0.18
NIF3L1-201ENST00000359683 SLITRK3O94933 977 aa13.93□□□□□ -0.18
NIF3L1-201ENST00000359683 P4HBP07237 508 aaKnown RBP13.93□□□□□ -0.18
NIF3L1-201ENST00000359683 MMP3P08254 477 aa13.93□□□□□ -0.18
Retrieved 100 of 20,778 RNA–protein pairs in 21.4 ms