RNA–Protein interactions for RNA: ENST00000359680.9

TRAPPC2-201, Transcript of trafficking protein particle complex 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TRAPPC2, Length 2,716 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC2-201ENST00000359680 NIP7Q9Y221 180 aaKnown RBP eCLIP10.89□□□□□ -0.67
TRAPPC2-201ENST00000359680 KIAA1551Q9HCM1 1747 aa10.88□□□□□ -0.67
TRAPPC2-201ENST00000359680 SART1O43290 800 aaKnown RBP10.88□□□□□ -0.67
TRAPPC2-201ENST00000359680 GOLGA8HP0CJ92 632 aa10.88□□□□□ -0.67
TRAPPC2-201ENST00000359680 SLC8A1P32418 973 aa10.88□□□□□ -0.67
TRAPPC2-201ENST00000359680 SCTRP47872 440 aa10.88□□□□□ -0.67
TRAPPC2-201ENST00000359680 USP11P51784 963 aa10.88□□□□□ -0.67
TRAPPC2-201ENST00000359680 CALCRLQ16602 461 aa10.88□□□□□ -0.67
TRAPPC2-201ENST00000359680 KRT71Q3SY84 523 aa10.88□□□□□ -0.67
TRAPPC2-201ENST00000359680 ACTRT1Q8TDG2 376 aa10.88□□□□□ -0.67
TRAPPC2-201ENST00000359680 SCFD2Q8WU76 684 aa10.88□□□□□ -0.67
TRAPPC2-201ENST00000359680 DDX12PQ92771 950 aa10.88□□□□□ -0.67
TRAPPC2-201ENST00000359680 CALR3Q96L12 384 aaKnown RBP10.88□□□□□ -0.67
TRAPPC2-201ENST00000359680 AP1M1Q9BXS5 423 aa10.88□□□□□ -0.67
TRAPPC2-201ENST00000359680 SWAP70Q9UH65 585 aa10.88□□□□□ -0.67
TRAPPC2-201ENST00000359680 EPB41L3Q9Y2J2 1087 aaPredicted RBP10.88□□□□□ -0.67
TRAPPC2-201ENST00000359680 UTP18Q9Y5J1 556 aaKnown RBP eCLIP10.88□□□□□ -0.67
TRAPPC2-201ENST00000359680 BCL9O00512 1426 aa10.88□□□□□ -0.67
TRAPPC2-201ENST00000359680 USP17L3A6NCW0 530 aa10.88□□□□□ -0.67
TRAPPC2-201ENST00000359680 USP17L4A6NCW7 530 aa10.88□□□□□ -0.67
TRAPPC2-201ENST00000359680 C5orf60A6NFR6 353 aa10.88□□□□□ -0.67
TRAPPC2-201ENST00000359680 KLRF2D3W0D1 207 aa10.88□□□□□ -0.67
TRAPPC2-201ENST00000359680 BACH1O14867 736 aa10.88□□□□□ -0.67
TRAPPC2-201ENST00000359680 NTSR2O95665 410 aa10.88□□□□□ -0.67
TRAPPC2-201ENST00000359680 PAEPP09466 180 aa10.88□□□□□ -0.67
TRAPPC2-201ENST00000359680 MAGOHP61326 146 aaKnown RBP10.88□□□□□ -0.67
TRAPPC2-201ENST00000359680 ORC2Q13416 577 aaPredicted RBP10.88□□□□□ -0.67
TRAPPC2-201ENST00000359680 SPRED3Q2MJR0 410 aa10.88□□□□□ -0.67
TRAPPC2-201ENST00000359680 FOXR2Q6PJQ5 311 aa10.88□□□□□ -0.67
TRAPPC2-201ENST00000359680 USP17L1Q7RTZ2 530 aa10.88□□□□□ -0.67
TRAPPC2-201ENST00000359680 TAX1BP1Q86VP1 789 aa10.88□□□□□ -0.67
TRAPPC2-201ENST00000359680 MAGEC3Q8TD91 643 aa10.88□□□□□ -0.67
TRAPPC2-201ENST00000359680 RAD54LQ92698 747 aa10.88□□□□□ -0.67
TRAPPC2-201ENST00000359680 TATDN2Q93075 761 aa10.88□□□□□ -0.67
TRAPPC2-201ENST00000359680 MAGOHBQ96A72 148 aaKnown RBP10.88□□□□□ -0.67
TRAPPC2-201ENST00000359680 PNMA5Q96PV4 448 aa10.88□□□□□ -0.67
TRAPPC2-201ENST00000359680 DDX47Q9H0S4 455 aaKnown RBP10.88□□□□□ -0.67
TRAPPC2-201ENST00000359680 SEC63Q9UGP8 760 aaKnown RBP10.88□□□□□ -0.67
TRAPPC2-201ENST00000359680 TPX2Q9ULW0 747 aaKnown RBP10.88□□□□□ -0.67
TRAPPC2-201ENST00000359680 MYH7BA7E2Y1 1941 aa10.87□□□□□ -0.67
TRAPPC2-201ENST00000359680 PALM3A6NDB9 673 aaPredicted RBP10.87□□□□□ -0.67
TRAPPC2-201ENST00000359680 CCDC188H7C350 402 aa10.87□□□□□ -0.67
TRAPPC2-201ENST00000359680 KRIT1O00522 736 aa10.87□□□□□ -0.67
TRAPPC2-201ENST00000359680 GNA14O95837 355 aa10.87□□□□□ -0.67
TRAPPC2-201ENST00000359680 NT5C2P49902 561 aa10.87□□□□□ -0.67
TRAPPC2-201ENST00000359680 E2F5Q15329 346 aa10.87□□□□□ -0.67
TRAPPC2-201ENST00000359680 LACTB2Q53H82 288 aaPredicted RBP10.87□□□□□ -0.67
TRAPPC2-201ENST00000359680 C10orf76Q5T2E6 689 aa10.87□□□□□ -0.67
TRAPPC2-201ENST00000359680 KRT79Q5XKE5 535 aa10.87□□□□□ -0.67
TRAPPC2-201ENST00000359680 MSL1Q68DK7 614 aa10.87□□□□□ -0.67
TRAPPC2-201ENST00000359680 ZNF444Q8N0Y2 327 aaPredicted RBP10.87□□□□□ -0.67
TRAPPC2-201ENST00000359680 REXO1Q8N1G1 1221 aaKnown RBP10.87□□□□□ -0.67
TRAPPC2-201ENST00000359680 GLIS3Q8NEA6 775 aa10.87□□□□□ -0.67
TRAPPC2-201ENST00000359680 SNX29Q8TEQ0 813 aa10.87□□□□□ -0.67
TRAPPC2-201ENST00000359680 HVCN1Q96D96 273 aa10.87□□□□□ -0.67
TRAPPC2-201ENST00000359680 DYNLL2Q96FJ2 89 aa10.87□□□□□ -0.67
TRAPPC2-201ENST00000359680 CNOT8Q9UFF9 292 aaKnown RBP10.87□□□□□ -0.67
TRAPPC2-201ENST00000359680 NOC2LQ9Y3T9 749 aaKnown RBP10.87□□□□□ -0.67
TRAPPC2-201ENST00000359680 SCN7AQ01118 1682 aa10.87□□□□□ -0.67
TRAPPC2-201ENST00000359680 PHLPP1O60346 1717 aa10.87□□□□□ -0.67
TRAPPC2-201ENST00000359680 BTNL10A8MVZ5 291 aa10.87□□□□□ -0.67
TRAPPC2-201ENST00000359680 PRDX5P30044 214 aa10.87□□□□□ -0.67
TRAPPC2-201ENST00000359680 XRCC4Q13426 336 aa10.87□□□□□ -0.67
TRAPPC2-201ENST00000359680 PTPROQ16827 1216 aa10.87□□□□□ -0.67
TRAPPC2-201ENST00000359680 CCDC26Q8TAB7 109 aa10.87□□□□□ -0.67
TRAPPC2-201ENST00000359680 CEP63Q96MT8 703 aa10.87□□□□□ -0.67
TRAPPC2-201ENST00000359680 PSMD1Q99460 953 aa10.87□□□□□ -0.67
TRAPPC2-201ENST00000359680 BUD13Q9BRD0 619 aaKnown RBP eCLIP10.87□□□□□ -0.67
TRAPPC2-201ENST00000359680 NEUROG2Q9H2A3 272 aa10.87□□□□□ -0.67
TRAPPC2-201ENST00000359680 CPVLQ9H3G5 476 aa10.87□□□□□ -0.67
TRAPPC2-201ENST00000359680 CNOT10Q9H9A5 744 aaKnown RBP10.87□□□□□ -0.67
TRAPPC2-201ENST00000359680 AIPL1Q9NZN9 384 aa10.87□□□□□ -0.67
TRAPPC2-201ENST00000359680 BIN2Q9UBW5 565 aaPredicted RBP10.87□□□□□ -0.67
TRAPPC2-201ENST00000359680 A0A0G2JS52 829 aa10.86□□□□□ -0.67
TRAPPC2-201ENST00000359680 PHF20L1A8MW92 1017 aa10.86□□□□□ -0.67
TRAPPC2-201ENST00000359680 DAPK3O43293 454 aa10.86□□□□□ -0.67
TRAPPC2-201ENST00000359680 GCFC2P16383 781 aaKnown RBP10.86□□□□□ -0.67
TRAPPC2-201ENST00000359680 SCP2P22307 547 aa10.86□□□□□ -0.67
TRAPPC2-201ENST00000359680 FXR2P51116 673 aaKnown RBP eCLIP10.86□□□□□ -0.67
TRAPPC2-201ENST00000359680 COASYQ13057 564 aa10.86□□□□□ -0.67
TRAPPC2-201ENST00000359680 C12orf60Q5U649 245 aa10.86□□□□□ -0.67
TRAPPC2-201ENST00000359680 PROCA1Q8NCQ7 364 aaPredicted RBP10.86□□□□□ -0.67
TRAPPC2-201ENST00000359680 MIEF2Q96C03 454 aa10.86□□□□□ -0.67
TRAPPC2-201ENST00000359680 TMEM47Q9BQJ4 181 aa10.86□□□□□ -0.67
TRAPPC2-201ENST00000359680 SPZ1Q9BXG8 430 aa10.86□□□□□ -0.67
TRAPPC2-201ENST00000359680 KDM4CQ9H3R0 1056 aa10.86□□□□□ -0.67
TRAPPC2-201ENST00000359680 GOLPH3Q9H4A6 298 aa10.86□□□□□ -0.67
TRAPPC2-201ENST00000359680 POTEMA6NI47 508 aa10.86□□□□□ -0.67
TRAPPC2-201ENST00000359680 GHRP10912 638 aa10.86□□□□□ -0.67
TRAPPC2-201ENST00000359680 FLT3P36888 993 aa10.86□□□□□ -0.67
TRAPPC2-201ENST00000359680 DHX9Q08211 1270 aaKnown RBP10.86□□□□□ -0.67
TRAPPC2-201ENST00000359680 NBPF9Q3BBW0 867 aa10.86□□□□□ -0.67
TRAPPC2-201ENST00000359680 ZCWPW2Q504Y3 356 aa10.86□□□□□ -0.67
TRAPPC2-201ENST00000359680 FAM26FQ5R3K3 315 aa10.86□□□□□ -0.67
TRAPPC2-201ENST00000359680 TMC3Q7Z5M5 1100 aa10.86□□□□□ -0.67
TRAPPC2-201ENST00000359680 FAM228AQ86W67 206 aa10.86□□□□□ -0.67
TRAPPC2-201ENST00000359680 DZIP1Q86YF9 867 aaKnown RBP10.86□□□□□ -0.67
TRAPPC2-201ENST00000359680 ANKS4BQ8N8V4 417 aa10.86□□□□□ -0.67
TRAPPC2-201ENST00000359680 SPAG5Q96R06 1193 aa10.86□□□□□ -0.67
TRAPPC2-201ENST00000359680 SLITRK6Q9H5Y7 841 aa10.86□□□□□ -0.67
Retrieved 100 of 20,778 RNA–protein pairs in 19.3 ms