RNA–Protein interactions for RNA: ENST00000359429.10

RPE-202, Transcript of ribulose-5-phosphate-3-epimerase, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RPE, Length 2,569 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPE-202ENST00000359429 ROBO3Q96MS0 1386 aa11.95□□□□□ -0.5
RPE-202ENST00000359429 RASSF9O75901 435 aa11.95□□□□□ -0.5
RPE-202ENST00000359429 CLSTN1O94985 981 aa11.95□□□□□ -0.5
RPE-202ENST00000359429 ZBTB48P10074 688 aaPredicted RBP11.95□□□□□ -0.5
RPE-202ENST00000359429 USP8P40818 1118 aa11.95□□□□□ -0.5
RPE-202ENST00000359429 KCNQ4P56696 695 aa11.95□□□□□ -0.5
RPE-202ENST00000359429 DDR1Q08345 913 aa11.95□□□□□ -0.5
RPE-202ENST00000359429 TMEM119Q4V9L6 283 aa11.95□□□□□ -0.5
RPE-202ENST00000359429 TRIM59Q8IWR1 403 aa11.95□□□□□ -0.5
RPE-202ENST00000359429 SCFD2Q8WU76 684 aa11.95□□□□□ -0.5
RPE-202ENST00000359429 LZTS2Q9BRK4 669 aa11.95□□□□□ -0.5
RPE-202ENST00000359429 OSBPL7Q9BZF2 842 aa11.95□□□□□ -0.5
RPE-202ENST00000359429 DDX20Q9UHI6 824 aaKnown RBP11.95□□□□□ -0.5
RPE-202ENST00000359429 MYH14Q7Z406 1995 aaKnown RBP11.95□□□□□ -0.5
RPE-202ENST00000359429 NPHP3-ACAD11A0A0J9YXS1 232 aa11.94□□□□□ -0.5
RPE-202ENST00000359429 USP17L5A8MUK1 530 aa11.94□□□□□ -0.5
RPE-202ENST00000359429 MAP2K2P36507 400 aa11.94□□□□□ -0.5
RPE-202ENST00000359429 TNNC1P63316 161 aa11.94□□□□□ -0.5
RPE-202ENST00000359429 PTK2Q05397 1052 aa11.94□□□□□ -0.5
RPE-202ENST00000359429 RPS6KA1Q15418 735 aa11.94□□□□□ -0.5
RPE-202ENST00000359429 PPP4R3AQ6IN85 833 aa11.94□□□□□ -0.5
RPE-202ENST00000359429 CHADLQ6NUI6 762 aa11.94□□□□□ -0.5
RPE-202ENST00000359429 MICALCLQ6ZW33 695 aa11.94□□□□□ -0.5
RPE-202ENST00000359429 PROM2Q8N271 834 aa11.94□□□□□ -0.5
RPE-202ENST00000359429 DDX47Q9H0S4 455 aaKnown RBP11.94□□□□□ -0.5
RPE-202ENST00000359429 GANQ9H2C0 597 aa11.94□□□□□ -0.5
RPE-202ENST00000359429 AIPL1Q9NZN9 384 aa11.94□□□□□ -0.5
RPE-202ENST00000359429 DNM1LO00429 736 aa11.94□□□□□ -0.5
RPE-202ENST00000359429 CEP104O60308 925 aa11.94□□□□□ -0.5
RPE-202ENST00000359429 KIF4AO95239 1232 aa11.94□□□□□ -0.5
RPE-202ENST00000359429 ITGA4P13612 1032 aa11.94□□□□□ -0.5
RPE-202ENST00000359429 PSMD2Q13200 908 aa11.94□□□□□ -0.5
RPE-202ENST00000359429 FAM26FQ5R3K3 315 aa11.94□□□□□ -0.5
RPE-202ENST00000359429 KRT79Q5XKE5 535 aa11.94□□□□□ -0.5
RPE-202ENST00000359429 DPY19L2P1Q6NXN4 242 aa11.94□□□□□ -0.5
RPE-202ENST00000359429 ZNF571Q7Z3V5 609 aaPredicted RBP11.94□□□□□ -0.5
RPE-202ENST00000359429 ZKSCAN4Q969J2 545 aaPredicted RBP11.94□□□□□ -0.5
RPE-202ENST00000359429 EYA3Q99504 573 aa11.94□□□□□ -0.5
RPE-202ENST00000359429 NUCKS1Q9H1E3 243 aaKnown RBP11.94□□□□□ -0.5
RPE-202ENST00000359429 CXorf56Q9H5V9 222 aa11.94□□□□□ -0.5
RPE-202ENST00000359429 KLC4Q9NSK0 619 aa11.94□□□□□ -0.5
RPE-202ENST00000359429 PANK4Q9NVE7 773 aa11.94□□□□□ -0.5
RPE-202ENST00000359429 BCCIPQ9P287 314 aaKnown RBP eCLIP11.94□□□□□ -0.5
RPE-202ENST00000359429 SEC63Q9UGP8 760 aaKnown RBP11.94□□□□□ -0.5
RPE-202ENST00000359429 UTP18Q9Y5J1 556 aaKnown RBP eCLIP11.94□□□□□ -0.5
RPE-202ENST00000359429 FRMPD2Q68DX3 1309 aaPredicted RBP11.94□□□□□ -0.5
RPE-202ENST00000359429 SNED1Q8TER0 1413 aa11.94□□□□□ -0.5
RPE-202ENST00000359429 BHMG1C9JSJ3 638 aaPredicted RBP11.93□□□□□ -0.5
RPE-202ENST00000359429 GCOM1H8Y6P7 765 aaPredicted RBP11.93□□□□□ -0.5
RPE-202ENST00000359429 SART1O43290 800 aaKnown RBP11.93□□□□□ -0.5
RPE-202ENST00000359429 SSBP05455 408 aaKnown RBP eCLIP11.93□□□□□ -0.5
RPE-202ENST00000359429 MYZAPP0CAP1 466 aa11.93□□□□□ -0.5
RPE-202ENST00000359429 CTNNA1P35221 906 aaKnown RBP11.93□□□□□ -0.5
RPE-202ENST00000359429 CDK8P49336 464 aa11.93□□□□□ -0.5
RPE-202ENST00000359429 SMTNP53814 917 aa11.93□□□□□ -0.5
RPE-202ENST00000359429 BYSLQ13895 437 aaKnown RBP11.93□□□□□ -0.5
RPE-202ENST00000359429 TBC1D9BQ66K14 1250 aa11.93□□□□□ -0.5
RPE-202ENST00000359429 ARHGAP27Q6ZUM4 889 aa11.93□□□□□ -0.5
RPE-202ENST00000359429 IRF2BP2Q7Z5L9 587 aa11.93□□□□□ -0.5
RPE-202ENST00000359429 METTL13Q8N6R0 699 aa11.93□□□□□ -0.5
RPE-202ENST00000359429 LRRC57Q8N9N7 239 aa11.93□□□□□ -0.5
RPE-202ENST00000359429 HAS1Q92839 578 aa11.93□□□□□ -0.5
RPE-202ENST00000359429 CEP95Q96GE4 821 aa11.93□□□□□ -0.5
RPE-202ENST00000359429 SLC40A1Q9NP59 571 aa11.93□□□□□ -0.5
RPE-202ENST00000359429 FBXL5Q9UKA1 691 aa11.93□□□□□ -0.5
RPE-202ENST00000359429 ZNF652Q9Y2D9 606 aa11.93□□□□□ -0.5
RPE-202ENST00000359429 PCDHA2Q9Y5H9 948 aa11.93□□□□□ -0.5
RPE-202ENST00000359429 IRS2Q9Y4H2 1338 aa11.93□□□□□ -0.5
RPE-202ENST00000359429 LAMB2P55268 1798 aa11.93□□□□□ -0.5
RPE-202ENST00000359429 GMNCA6NCL1 334 aa11.93□□□□□ -0.5
RPE-202ENST00000359429 E9PMD0 336 aa11.93□□□□□ -0.5
RPE-202ENST00000359429 TRAPPC3O43617 180 aa11.93□□□□□ -0.5
RPE-202ENST00000359429 SLC9A1P19634 815 aa11.93□□□□□ -0.5
RPE-202ENST00000359429 USP11P51784 963 aa11.93□□□□□ -0.5
RPE-202ENST00000359429 ASIC2Q16515 512 aa11.93□□□□□ -0.5
RPE-202ENST00000359429 TMEM266Q2M3C6 531 aa11.93□□□□□ -0.5
RPE-202ENST00000359429 LRIG3Q6UXM1 1119 aa11.93□□□□□ -0.5
RPE-202ENST00000359429 SCFD1Q8WVM8 642 aa11.93□□□□□ -0.5
RPE-202ENST00000359429 TAF4BQ92750 862 aa11.93□□□□□ -0.5
RPE-202ENST00000359429 AMACRQ9UHK6 382 aa11.93□□□□□ -0.5
RPE-202ENST00000359429 DAPK3O43293 454 aa11.92□□□□□ -0.5
RPE-202ENST00000359429 LDHBP07195 334 aaKnown RBP11.92□□□□□ -0.5
RPE-202ENST00000359429 KCNH2Q12809 1159 aa11.92□□□□□ -0.5
RPE-202ENST00000359429 PDIA5Q14554 519 aa11.92□□□□□ -0.5
RPE-202ENST00000359429 UBE2SQ16763 222 aa11.92□□□□□ -0.5
RPE-202ENST00000359429 KCTD10Q9H3F6 313 aa11.92□□□□□ -0.5
RPE-202ENST00000359429 LUC7LQ9NQ29 371 aaKnown RBP11.92□□□□□ -0.5
RPE-202ENST00000359429 LEMD3Q9Y2U8 911 aa11.92□□□□□ -0.5
RPE-202ENST00000359429 LTBP4Q8N2S1 1624 aa11.92□□□□□ -0.5
RPE-202ENST00000359429 GOLGA6L10A6NI86 522 aa11.92□□□□□ -0.5
RPE-202ENST00000359429 TNNI2P48788 182 aa11.92□□□□□ -0.5
RPE-202ENST00000359429 FOXR2Q6PJQ5 311 aa11.92□□□□□ -0.5
RPE-202ENST00000359429 CLEC4GQ6UXB4 293 aa11.92□□□□□ -0.5
RPE-202ENST00000359429 FAM228AQ86W67 206 aa11.92□□□□□ -0.5
RPE-202ENST00000359429 RBM46Q8TBY0 533 aaKnown RBP11.92□□□□□ -0.5
RPE-202ENST00000359429 UBLCP1Q8WVY7 318 aaPredicted RBP11.92□□□□□ -0.5
RPE-202ENST00000359429 RAPGEF5Q92565 580 aa11.92□□□□□ -0.5
RPE-202ENST00000359429 GPR101Q96P66 508 aaPredicted RBP11.92□□□□□ -0.5
RPE-202ENST00000359429 CELF4Q9BZC1 486 aaKnown RBP11.92□□□□□ -0.5
RPE-202ENST00000359429 RIOX1Q9H6W3 641 aa11.92□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 13.9 ms