RNA–Protein interactions for RNA: ENST00000358894.10

COL20A1-201, Transcript of collagen type XX alpha 1 chain, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene COL20A1, Length 4,172 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL20A1-201ENST00000358894 ANKRD62A6NC57 917 aa13.4□□□□□ -0.26
COL20A1-201ENST00000358894 SORBS3O60504 671 aa13.4□□□□□ -0.26
COL20A1-201ENST00000358894 PALMO75781 387 aa13.4□□□□□ -0.26
COL20A1-201ENST00000358894 BCRP11274 1271 aa13.4□□□□□ -0.26
COL20A1-201ENST00000358894 MAGEA9P43362 315 aa13.4□□□□□ -0.26
COL20A1-201ENST00000358894 CALCOCO2Q13137 446 aa13.4□□□□□ -0.26
COL20A1-201ENST00000358894 SYDE2Q5VT97 1194 aa13.4□□□□□ -0.26
COL20A1-201ENST00000358894 C16orf86Q6ZW13 317 aa13.4□□□□□ -0.26
COL20A1-201ENST00000358894 PNMA8AQ86V59 439 aaPredicted RBP13.4□□□□□ -0.26
COL20A1-201ENST00000358894 UHMK1Q8TAS1 419 aaKnown RBP13.4□□□□□ -0.26
COL20A1-201ENST00000358894 JDP2Q8WYK2 163 aa13.4□□□□□ -0.26
COL20A1-201ENST00000358894 MTUS1Q9ULD2 1270 aa13.4□□□□□ -0.26
COL20A1-201ENST00000358894 FHOD1Q9Y613 1164 aa13.4□□□□□ -0.26
COL20A1-201ENST00000358894 PLEKP08567 350 aaPredicted RBP13.39□□□□□ -0.27
COL20A1-201ENST00000358894 PLA2G4AP47712 749 aa13.39□□□□□ -0.27
COL20A1-201ENST00000358894 KCNH2Q12809 1159 aa13.39□□□□□ -0.27
COL20A1-201ENST00000358894 MCTP2Q6DN12 878 aa13.39□□□□□ -0.27
COL20A1-201ENST00000358894 JPH2Q9BR39 696 aaPredicted RBP13.39□□□□□ -0.27
COL20A1-201ENST00000358894 PCIF1Q9H4Z3 704 aa13.39□□□□□ -0.27
COL20A1-201ENST00000358894 PLEKHG2Q9H7P9 1386 aa13.39□□□□□ -0.27
COL20A1-201ENST00000358894 SMARCAL1Q9NZC9 954 aa13.39□□□□□ -0.27
COL20A1-201ENST00000358894 TRPC5Q9UL62 973 aaPredicted RBP13.39□□□□□ -0.27
COL20A1-201ENST00000358894 TACC3Q9Y6A5 838 aa13.39□□□□□ -0.27
COL20A1-201ENST00000358894 STK24Q9Y6E0 443 aa13.39□□□□□ -0.27
COL20A1-201ENST00000358894 KIF13AQ9H1H9 1805 aa13.39□□□□□ -0.27
COL20A1-201ENST00000358894 SMTNP53814 917 aa13.39□□□□□ -0.27
COL20A1-201ENST00000358894 USP14P54578 494 aa13.39□□□□□ -0.27
COL20A1-201ENST00000358894 EPHB4P54760 987 aa13.39□□□□□ -0.27
COL20A1-201ENST00000358894 TBX2Q13207 712 aaPredicted RBP13.39□□□□□ -0.27
COL20A1-201ENST00000358894 RC3H1Q5TC82 1133 aaKnown RBP13.39□□□□□ -0.27
COL20A1-201ENST00000358894 ALKBH5Q6P6C2 394 aaKnown RBP13.39□□□□□ -0.27
COL20A1-201ENST00000358894 PAIP2Q9BPZ3 127 aaKnown RBP13.39□□□□□ -0.27
COL20A1-201ENST00000358894 DHX36Q9H2U1 1008 aaKnown RBP13.39□□□□□ -0.27
COL20A1-201ENST00000358894 SLTMQ9NWH9 1034 aaKnown RBP eCLIP13.39□□□□□ -0.27
COL20A1-201ENST00000358894 LARSQ9P2J5 1176 aaKnown RBP13.39□□□□□ -0.27
COL20A1-201ENST00000358894 CEP83Q9Y592 693 aa13.39□□□□□ -0.27
COL20A1-201ENST00000358894 DUSP10Q9Y6W6 482 aa13.39□□□□□ -0.27
COL20A1-201ENST00000358894 MRC1P22897 1456 aa13.39□□□□□ -0.27
COL20A1-201ENST00000358894 TESPA1A2RU30 521 aaPredicted RBP13.39□□□□□ -0.27
COL20A1-201ENST00000358894 PALM3A6NDB9 673 aaPredicted RBP13.39□□□□□ -0.27
COL20A1-201ENST00000358894 TBC1D8O95759 1140 aa13.39□□□□□ -0.27
COL20A1-201ENST00000358894 ZNF543Q08ER8 600 aa13.39□□□□□ -0.27
COL20A1-201ENST00000358894 MIGA2Q7L4E1 593 aa13.39□□□□□ -0.27
COL20A1-201ENST00000358894 FMNL3Q8IVF7 1028 aa13.39□□□□□ -0.27
COL20A1-201ENST00000358894 PPM1KQ8N3J5 372 aa13.39□□□□□ -0.27
COL20A1-201ENST00000358894 NAP1L3Q99457 506 aaPredicted RBP13.39□□□□□ -0.27
COL20A1-201ENST00000358894 C7orf25Q9BPX7 421 aa13.39□□□□□ -0.27
COL20A1-201ENST00000358894 AP1M1Q9BXS5 423 aa13.39□□□□□ -0.27
COL20A1-201ENST00000358894 NFU1Q9UMS0 254 aa13.39□□□□□ -0.27
COL20A1-201ENST00000358894 KIF1AQ12756 1690 aa13.39□□□□□ -0.27
COL20A1-201ENST00000358894 ANO9A1A5B4 782 aa13.39□□□□□ -0.27
COL20A1-201ENST00000358894 RAD17O75943 681 aa13.39□□□□□ -0.27
COL20A1-201ENST00000358894 GCKP35557 465 aa13.39□□□□□ -0.27
COL20A1-201ENST00000358894 PLCB3Q01970 1234 aa13.39□□□□□ -0.27
COL20A1-201ENST00000358894 SLC10A5Q5PT55 438 aa13.39□□□□□ -0.27
COL20A1-201ENST00000358894 GSTA5Q7RTV2 222 aa13.39□□□□□ -0.27
COL20A1-201ENST00000358894 PNKPQ96T60 521 aa13.39□□□□□ -0.27
COL20A1-201ENST00000358894 BAIAP2L1Q9UHR4 511 aa13.39□□□□□ -0.27
COL20A1-201ENST00000358894 MED1Q15648 1581 aaPredicted RBP13.38□□□□□ -0.27
COL20A1-201ENST00000358894 F5H6K3 240 aa13.38□□□□□ -0.27
COL20A1-201ENST00000358894 SLC37A4O43826 429 aa13.38□□□□□ -0.27
COL20A1-201ENST00000358894 KLRC3Q07444 240 aa13.38□□□□□ -0.27
COL20A1-201ENST00000358894 RIN2Q8WYP3 895 aaPredicted RBP13.38□□□□□ -0.27
COL20A1-201ENST00000358894 RSRC1Q96IZ7 334 aaKnown RBP13.38□□□□□ -0.27
COL20A1-201ENST00000358894 FNBP1Q96RU3 617 aa13.38□□□□□ -0.27
COL20A1-201ENST00000358894 OSBPL9Q96SU4 736 aa13.38□□□□□ -0.27
COL20A1-201ENST00000358894 ZNF577Q9BSK1 485 aa13.38□□□□□ -0.27
COL20A1-201ENST00000358894 CNTNAP4Q9C0A0 1308 aa13.38□□□□□ -0.27
COL20A1-201ENST00000358894 E7EVH7 732 aa13.38□□□□□ -0.27
COL20A1-201ENST00000358894 CC2D2BQ6DHV5 1058 aa13.38□□□□□ -0.27
COL20A1-201ENST00000358894 UBL4BQ8N7F7 174 aa13.38□□□□□ -0.27
COL20A1-201ENST00000358894 STIM2Q9P246 746 aa13.38□□□□□ -0.27
COL20A1-201ENST00000358894 MRPL11Q9Y3B7 192 aaKnown RBP13.38□□□□□ -0.27
COL20A1-201ENST00000358894 PDS5AQ29RF7 1337 aaKnown RBP13.38□□□□□ -0.27
COL20A1-201ENST00000358894 RPSAP08865 295 aaKnown RBP13.38□□□□□ -0.27
COL20A1-201ENST00000358894 RCSD1Q6JBY9 416 aa13.38□□□□□ -0.27
COL20A1-201ENST00000358894 CCDC105Q8IYK2 499 aa13.38□□□□□ -0.27
COL20A1-201ENST00000358894 LACRTQ9GZZ8 138 aa13.38□□□□□ -0.27
COL20A1-201ENST00000358894 GPR75-ASB3A0A0A6YYF3 556 aa13.37□□□□□ -0.27
COL20A1-201ENST00000358894 CYTH3O43739 400 aa13.37□□□□□ -0.27
COL20A1-201ENST00000358894 GGCXP38435 758 aa13.37□□□□□ -0.27
COL20A1-201ENST00000358894 STAT2P52630 851 aa13.37□□□□□ -0.27
COL20A1-201ENST00000358894 FAM102BQ5T8I3 360 aa13.37□□□□□ -0.27
COL20A1-201ENST00000358894 TEKT3Q9BXF9 490 aa13.37□□□□□ -0.27
COL20A1-201ENST00000358894 KBTBD4Q9NVX7 518 aa13.37□□□□□ -0.27
COL20A1-201ENST00000358894 CEP72Q9P209 647 aa13.37□□□□□ -0.27
COL20A1-201ENST00000358894 CCPG1Q9ULG6 757 aa13.37□□□□□ -0.27
COL20A1-201ENST00000358894 PSMC2P35998 433 aaKnown RBP13.37□□□□□ -0.27
COL20A1-201ENST00000358894 E2F5Q15329 346 aa13.37□□□□□ -0.27
COL20A1-201ENST00000358894 GRIK5Q16478 980 aa13.37□□□□□ -0.27
COL20A1-201ENST00000358894 TTI2Q6NXR4 508 aa13.37□□□□□ -0.27
COL20A1-201ENST00000358894 RUFY4Q6ZNE9 571 aa13.37□□□□□ -0.27
COL20A1-201ENST00000358894 PTF1AQ7RTS3 328 aa13.37□□□□□ -0.27
COL20A1-201ENST00000358894 MICAL1Q8TDZ2 1067 aa13.37□□□□□ -0.27
COL20A1-201ENST00000358894 GOLGA8KD6RF30 607 aa13.37□□□□□ -0.27
COL20A1-201ENST00000358894 NPR1P16066 1061 aa13.37□□□□□ -0.27
COL20A1-201ENST00000358894 PPP4CP60510 307 aa13.37□□□□□ -0.27
COL20A1-201ENST00000358894 MMS22LQ6ZRQ5 1243 aa13.37□□□□□ -0.27
COL20A1-201ENST00000358894 BARGINQ6ZT62 677 aa13.37□□□□□ -0.27
COL20A1-201ENST00000358894 PROM2Q8N271 834 aa13.37□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 67.6 ms