RNA–Protein interactions for RNA: ENST00000358540.6

PTPN5-201, Transcript of protein tyrosine phosphatase, non-receptor type 5, humanhuman

TSL 1 (best) BASIC

Gene PTPN5, Length 3,135 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN5-201ENST00000358540 LRRC27Q9C0I9 530 aa17.7■□□□□ 0.42
PTPN5-201ENST00000358540 PLEKP08567 350 aaPredicted RBP17.7■□□□□ 0.42
PTPN5-201ENST00000358540 SPATA31C1P0DKV0 1188 aa17.7■□□□□ 0.42
PTPN5-201ENST00000358540 CASP5P51878 434 aa17.7■□□□□ 0.42
PTPN5-201ENST00000358540 PUF60Q9UHX1 559 aaKnown RBP17.7■□□□□ 0.42
PTPN5-201ENST00000358540 BAG6P46379 1132 aa17.7■□□□□ 0.42
PTPN5-201ENST00000358540 KIF4BQ2VIQ3 1234 aa17.7■□□□□ 0.42
PTPN5-201ENST00000358540 COBLL1Q53SF7 1204 aa17.7■□□□□ 0.42
PTPN5-201ENST00000358540 CCDC65Q8IXS2 484 aa17.7■□□□□ 0.42
PTPN5-201ENST00000358540 TSG101Q99816 390 aa17.7■□□□□ 0.42
PTPN5-201ENST00000358540 WDR18Q9BV38 432 aa17.7■□□□□ 0.42
PTPN5-201ENST00000358540 PDE11AQ9HCR9 933 aa17.7■□□□□ 0.42
PTPN5-201ENST00000358540 SLC12A3P55017 1021 aa17.69■□□□□ 0.42
PTPN5-201ENST00000358540 CYP27A1Q02318 531 aa17.69■□□□□ 0.42
PTPN5-201ENST00000358540 HAUS3Q68CZ6 603 aa17.69■□□□□ 0.42
PTPN5-201ENST00000358540 DRC1Q96MC2 740 aa17.69■□□□□ 0.42
PTPN5-201ENST00000358540 YY1AP1Q9H869 796 aa17.69■□□□□ 0.42
PTPN5-201ENST00000358540 PSD3Q9NYI0 1048 aa17.69■□□□□ 0.42
PTPN5-201ENST00000358540 JRKLQ9Y4A0 524 aa17.69■□□□□ 0.42
PTPN5-201ENST00000358540 RSPH10B2B2RC85 870 aa17.69■□□□□ 0.42
PTPN5-201ENST00000358540 FOSP01100 380 aaPredicted RBP17.69■□□□□ 0.42
PTPN5-201ENST00000358540 RSPH10BP0C881 870 aa17.69■□□□□ 0.42
PTPN5-201ENST00000358540 CTTNQ14247 550 aaKnown RBP17.69■□□□□ 0.42
PTPN5-201ENST00000358540 TTC31Q49AM3 519 aaPredicted RBP17.69■□□□□ 0.42
PTPN5-201ENST00000358540 Q4G0T1 1027 aa17.69■□□□□ 0.42
PTPN5-201ENST00000358540 CCDC40Q4G0X9 1142 aa17.69■□□□□ 0.42
PTPN5-201ENST00000358540 PIGOQ8TEQ8 1089 aa17.69■□□□□ 0.42
PTPN5-201ENST00000358540 VCPKMTQ9H867 229 aa17.69■□□□□ 0.42
PTPN5-201ENST00000358540 PKD2L1Q9P0L9 805 aa17.69■□□□□ 0.42
PTPN5-201ENST00000358540 HERVK_113P62684 666 aa17.68■□□□□ 0.42
PTPN5-201ENST00000358540 APBA1Q02410 837 aa17.68■□□□□ 0.42
PTPN5-201ENST00000358540 LRRC63Q05C16 580 aa17.68■□□□□ 0.42
PTPN5-201ENST00000358540 PACS2Q86VP3 889 aa17.68■□□□□ 0.42
PTPN5-201ENST00000358540 SCFD1Q8WVM8 642 aa17.68■□□□□ 0.42
PTPN5-201ENST00000358540 BHMT2Q9H2M3 363 aa17.68■□□□□ 0.42
PTPN5-201ENST00000358540 ASTN2O75129 1339 aaPredicted RBP17.68■□□□□ 0.42
PTPN5-201ENST00000358540 ZBTB39O15060 712 aa17.68■□□□□ 0.42
PTPN5-201ENST00000358540 CAP2P40123 477 aa17.68■□□□□ 0.42
PTPN5-201ENST00000358540 MMP14P50281 582 aa17.68■□□□□ 0.42
PTPN5-201ENST00000358540 MAN2A1Q16706 1144 aa17.68■□□□□ 0.42
PTPN5-201ENST00000358540 ZNF341Q9BYN7 854 aa17.68■□□□□ 0.42
PTPN5-201ENST00000358540 VAV3Q9UKW4 847 aa17.68■□□□□ 0.42
PTPN5-201ENST00000358540 SFI1A8K8P3 1242 aa17.67■□□□□ 0.42
PTPN5-201ENST00000358540 PSMD2Q13200 908 aa17.67■□□□□ 0.42
PTPN5-201ENST00000358540 MOXD1Q6UVY6 613 aa17.67■□□□□ 0.42
PTPN5-201ENST00000358540 KRT26Q7Z3Y9 468 aa17.67■□□□□ 0.42
PTPN5-201ENST00000358540 ERMNQ8TAM6 284 aa17.67■□□□□ 0.42
PTPN5-201ENST00000358540 REEP2Q9BRK0 252 aa17.67■□□□□ 0.42
PTPN5-201ENST00000358540 CRACR2AQ9BSW2 395 aa17.67■□□□□ 0.42
PTPN5-201ENST00000358540 NHEJ1Q9H9Q4 299 aaPredicted RBP17.67■□□□□ 0.42
PTPN5-201ENST00000358540 GEMIN8Q9NWZ8 242 aaKnown RBP17.67■□□□□ 0.42
PTPN5-201ENST00000358540 DNM3Q9UQ16 869 aa17.67■□□□□ 0.42
PTPN5-201ENST00000358540 PCDHA2Q9Y5H9 948 aa17.67■□□□□ 0.42
PTPN5-201ENST00000358540 ZBED6P86452 979 aa17.67■□□□□ 0.42
PTPN5-201ENST00000358540 SFR1Q86XK3 245 aa17.67■□□□□ 0.42
PTPN5-201ENST00000358540 AGBL1Q96MI9 1066 aa17.67■□□□□ 0.42
PTPN5-201ENST00000358540 ERGIC2Q96RQ1 377 aa17.67■□□□□ 0.42
PTPN5-201ENST00000358540 ZNHIT6Q9NWK9 470 aaKnown RBP17.67■□□□□ 0.42
PTPN5-201ENST00000358540 GCOM1H8Y6P7 765 aaPredicted RBP17.67■□□□□ 0.42
PTPN5-201ENST00000358540 IVLP07476 585 aa17.67■□□□□ 0.42
PTPN5-201ENST00000358540 POLR2MP0CAP2 368 aa17.67■□□□□ 0.42
PTPN5-201ENST00000358540 RASA3Q14644 834 aa17.67■□□□□ 0.42
PTPN5-201ENST00000358540 ZCWPW2Q504Y3 356 aa17.67■□□□□ 0.42
PTPN5-201ENST00000358540 RSRC2Q7L4I2 434 aaKnown RBP17.67■□□□□ 0.42
PTPN5-201ENST00000358540 RABGGTAQ92696 567 aa17.67■□□□□ 0.42
PTPN5-201ENST00000358540 GOLGA1Q92805 767 aa17.67■□□□□ 0.42
PTPN5-201ENST00000358540 EIF2AK1Q9BQI3 630 aaKnown RBP17.67■□□□□ 0.42
PTPN5-201ENST00000358540 RUSC1Q9BVN2 902 aa17.67■□□□□ 0.42
PTPN5-201ENST00000358540 EMILIN3Q9NT22 766 aa17.67■□□□□ 0.42
PTPN5-201ENST00000358540 SIK3Q9Y2K2 1263 aa17.67■□□□□ 0.42
PTPN5-201ENST00000358540 IGLV3-22A0A075B6J6 115 aa17.66■□□□□ 0.42
PTPN5-201ENST00000358540 RCCD1A6NED2 376 aa17.66■□□□□ 0.42
PTPN5-201ENST00000358540 ENC1O14682 589 aa17.66■□□□□ 0.42
PTPN5-201ENST00000358540 INPP5BP32019 993 aa17.66■□□□□ 0.42
PTPN5-201ENST00000358540 KIAA1328Q86T90 577 aa17.66■□□□□ 0.42
PTPN5-201ENST00000358540 MYOZ2Q9NPC6 264 aa17.66■□□□□ 0.42
PTPN5-201ENST00000358540 COL2A1P02458 1487 aaPredicted RBP17.66■□□□□ 0.42
PTPN5-201ENST00000358540 DDX39AO00148 427 aaKnown RBP17.66■□□□□ 0.42
PTPN5-201ENST00000358540 N4BP1O75113 896 aaKnown RBP17.66■□□□□ 0.42
PTPN5-201ENST00000358540 RPA1P27694 616 aa17.66■□□□□ 0.42
PTPN5-201ENST00000358540 GIT2Q14161 759 aa17.66■□□□□ 0.42
PTPN5-201ENST00000358540 SKIDA1Q1XH10 827 aa17.66■□□□□ 0.42
PTPN5-201ENST00000358540 LDHDQ86WU2 507 aa17.66■□□□□ 0.42
PTPN5-201ENST00000358540 TEX2Q8IWB9 1127 aa17.66■□□□□ 0.42
PTPN5-201ENST00000358540 TPH2Q8IWU9 490 aa17.66■□□□□ 0.42
PTPN5-201ENST00000358540 CPXCR1Q8N123 301 aa17.66■□□□□ 0.42
PTPN5-201ENST00000358540 NUP58Q9BVL2 599 aa17.66■□□□□ 0.42
PTPN5-201ENST00000358540 HOMER2Q9NSB8 354 aa17.66■□□□□ 0.42
PTPN5-201ENST00000358540 DUSP10Q9Y6W6 482 aa17.66■□□□□ 0.42
PTPN5-201ENST00000358540 CTAGE9A4FU28 777 aa17.65■□□□□ 0.42
PTPN5-201ENST00000358540 EIF3CLB5ME19 914 aaKnown RBP17.65■□□□□ 0.42
PTPN5-201ENST00000358540 POLD1P28340 1107 aa17.65■□□□□ 0.42
PTPN5-201ENST00000358540 MAGEA9P43362 315 aa17.65■□□□□ 0.42
PTPN5-201ENST00000358540 FKBP3Q00688 224 aaKnown RBP17.65■□□□□ 0.42
PTPN5-201ENST00000358540 CCDC122Q5T0U0 273 aa17.65■□□□□ 0.42
PTPN5-201ENST00000358540 CIAPIN1Q6FI81 312 aa17.65■□□□□ 0.42
PTPN5-201ENST00000358540 CHURC1Q8WUH1 139 aa17.65■□□□□ 0.42
PTPN5-201ENST00000358540 EIF3CQ99613 913 aaKnown RBP17.65■□□□□ 0.42
PTPN5-201ENST00000358540 LACRTQ9GZZ8 138 aa17.65■□□□□ 0.42
PTPN5-201ENST00000358540 IKZF4Q9H2S9 585 aa17.65■□□□□ 0.42
Retrieved 100 of 20,778 RNA–protein pairs in 23.4 ms