RNA–Protein interactions for RNA: ENST00000358181.8

CHD3-202, Transcript of chromodomain helicase DNA binding protein 3, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CHD3, Length 7,286 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD3-202ENST00000358181 DONSONQ9NYP3 566 aa10.52□□□□□ -0.73
CHD3-202ENST00000358181 ZNF518AQ6AHZ1 1483 aa10.52□□□□□ -0.73
CHD3-202ENST00000358181 CSE1LP55060 971 aaKnown RBP10.52□□□□□ -0.73
CHD3-202ENST00000358181 ADALQ6DHV7 355 aa10.52□□□□□ -0.73
CHD3-202ENST00000358181 RNF135Q8IUD6 432 aa10.52□□□□□ -0.73
CHD3-202ENST00000358181 SLF1Q9BQI6 1058 aa10.52□□□□□ -0.73
CHD3-202ENST00000358181 ZNF304Q9HCX3 659 aa10.52□□□□□ -0.73
CHD3-202ENST00000358181 ZNF233A6NK53 670 aa10.52□□□□□ -0.73
CHD3-202ENST00000358181 SNAP25P60880 206 aa10.52□□□□□ -0.73
CHD3-202ENST00000358181 TMTC1Q8IUR5 882 aa10.52□□□□□ -0.73
CHD3-202ENST00000358181 RAB42Q8N4Z0 105 aa10.52□□□□□ -0.73
CHD3-202ENST00000358181 DPF3Q92784 378 aa10.52□□□□□ -0.73
CHD3-202ENST00000358181 SCUBE2Q9NQ36 999 aa10.52□□□□□ -0.73
CHD3-202ENST00000358181 ZNF215Q9UL58 517 aaPredicted RBP10.52□□□□□ -0.73
CHD3-202ENST00000358181 CTTNBP2Q8WZ74 1663 aa10.52□□□□□ -0.73
CHD3-202ENST00000358181 MTERF2Q49AM1 385 aa10.52□□□□□ -0.73
CHD3-202ENST00000358181 SYTL3Q4VX76 610 aa10.52□□□□□ -0.73
CHD3-202ENST00000358181 ZNF394Q53GI3 561 aa10.52□□□□□ -0.73
CHD3-202ENST00000358181 RAET1EQ8TD07 263 aa10.52□□□□□ -0.73
CHD3-202ENST00000358181 FSD1LQ9BXM9 530 aa10.52□□□□□ -0.73
CHD3-202ENST00000358181 RRAGDQ9NQL2 400 aaPredicted RBP10.52□□□□□ -0.73
CHD3-202ENST00000358181 VPS54Q9P1Q0 977 aa10.52□□□□□ -0.73
CHD3-202ENST00000358181 JAK2O60674 1132 aa10.51□□□□□ -0.73
CHD3-202ENST00000358181 MAGEA1P43355 309 aa10.51□□□□□ -0.73
CHD3-202ENST00000358181 KCNJ6P48051 423 aa10.51□□□□□ -0.73
CHD3-202ENST00000358181 MESDQ14696 234 aa10.51□□□□□ -0.73
CHD3-202ENST00000358181 PCGF5Q86SE9 256 aa10.51□□□□□ -0.73
CHD3-202ENST00000358181 STX19Q8N4C7 294 aa10.51□□□□□ -0.73
CHD3-202ENST00000358181 OR6B3Q8NGW1 331 aa10.51□□□□□ -0.73
CHD3-202ENST00000358181 SMARCAD1Q9H4L7 1026 aa10.51□□□□□ -0.73
CHD3-202ENST00000358181 MRPL11Q9Y3B7 192 aaKnown RBP10.51□□□□□ -0.73
CHD3-202ENST00000358181 UBA6A0AVT1 1052 aaPredicted RBP10.51□□□□□ -0.73
CHD3-202ENST00000358181 EYA2O00167 538 aa10.51□□□□□ -0.73
CHD3-202ENST00000358181 GRIN1Q05586 938 aa10.51□□□□□ -0.73
CHD3-202ENST00000358181 ZNF496Q96IT1 587 aaPredicted RBP10.51□□□□□ -0.73
CHD3-202ENST00000358181 DRC3Q9H069 523 aa10.51□□□□□ -0.73
CHD3-202ENST00000358181 PSTPIP2Q9H939 334 aa10.51□□□□□ -0.73
CHD3-202ENST00000358181 TRPM2O94759 1503 aa10.51□□□□□ -0.73
CHD3-202ENST00000358181 SH3TC1Q8TE82 1336 aa10.51□□□□□ -0.73
CHD3-202ENST00000358181 NUP153P49790 1475 aaKnown RBP10.51□□□□□ -0.73
CHD3-202ENST00000358181 TMEM232C9JQI7 657 aa10.51□□□□□ -0.73
CHD3-202ENST00000358181 CCND2P30279 289 aa10.51□□□□□ -0.73
CHD3-202ENST00000358181 SPATA5Q8NB90 893 aa10.51□□□□□ -0.73
CHD3-202ENST00000358181 RAB17Q9H0T7 212 aa10.51□□□□□ -0.73
CHD3-202ENST00000358181 SOS1Q07889 1333 aaPredicted RBP10.51□□□□□ -0.73
CHD3-202ENST00000358181 MOCS2O96007 188 aaPredicted RBP10.51□□□□□ -0.73
CHD3-202ENST00000358181 KRT1P04264 644 aa10.51□□□□□ -0.73
CHD3-202ENST00000358181 HNRNPCP07910 306 aaKnown RBP eCLIP10.51□□□□□ -0.73
CHD3-202ENST00000358181 KITP10721 976 aa10.51□□□□□ -0.73
CHD3-202ENST00000358181 MYL7Q01449 175 aa10.51□□□□□ -0.73
CHD3-202ENST00000358181 MFSD14BQ5SR56 506 aa10.51□□□□□ -0.73
CHD3-202ENST00000358181 ZBTB40Q9NUA8 1239 aa10.51□□□□□ -0.73
CHD3-202ENST00000358181 TXLNGQ9NUQ3 528 aa10.51□□□□□ -0.73
CHD3-202ENST00000358181 GTSE1Q9NYZ3 720 aa10.51□□□□□ -0.73
CHD3-202ENST00000358181 TBK1Q9UHD2 729 aa10.51□□□□□ -0.73
CHD3-202ENST00000358181 UHRF1BP1Q6BDS2 1440 aa10.51□□□□□ -0.73
CHD3-202ENST00000358181 HNRNPDLO14979 420 aaKnown RBP10.51□□□□□ -0.73
CHD3-202ENST00000358181 XRCC5P13010 732 aaKnown RBP10.51□□□□□ -0.73
CHD3-202ENST00000358181 RPS6KB1P23443 525 aa10.51□□□□□ -0.73
CHD3-202ENST00000358181 SLC16A1P53985 500 aa10.51□□□□□ -0.73
CHD3-202ENST00000358181 NUDT18Q6ZVK8 323 aa10.51□□□□□ -0.73
CHD3-202ENST00000358181 DCTPP1Q9H773 170 aa10.51□□□□□ -0.73
CHD3-202ENST00000358181 L3MBTL1Q9Y468 752 aa10.51□□□□□ -0.73
CHD3-202ENST00000358181 FAM47DPA6NHR8 397 aa10.5□□□□□ -0.73
CHD3-202ENST00000358181 ARHGAP6O43182 974 aa10.5□□□□□ -0.73
CHD3-202ENST00000358181 RPSAP08865 295 aaKnown RBP10.5□□□□□ -0.73
CHD3-202ENST00000358181 FOSL2P15408 326 aa10.5□□□□□ -0.73
CHD3-202ENST00000358181 GCKP35557 465 aa10.5□□□□□ -0.73
CHD3-202ENST00000358181 TFAP4Q01664 338 aa10.5□□□□□ -0.73
CHD3-202ENST00000358181 GTF2H3Q13889 308 aa10.5□□□□□ -0.73
CHD3-202ENST00000358181 CCDC142Q17RM4 750 aa10.5□□□□□ -0.73
CHD3-202ENST00000358181 SDE2Q6IQ49 451 aa10.5□□□□□ -0.73
CHD3-202ENST00000358181 TRMT44Q8IYL2 757 aaKnown RBP10.5□□□□□ -0.73
CHD3-202ENST00000358181 RPF1Q9H9Y2 349 aaKnown RBP10.5□□□□□ -0.73
CHD3-202ENST00000358181 PCDHA1Q9Y5I3 950 aa10.5□□□□□ -0.73
CHD3-202ENST00000358181 TEX14Q8IWB6 1497 aa10.5□□□□□ -0.73
CHD3-202ENST00000358181 ARHGEF9O43307 516 aa10.5□□□□□ -0.73
CHD3-202ENST00000358181 CPB1P15086 417 aa10.5□□□□□ -0.73
CHD3-202ENST00000358181 IL13P35225 146 aa10.5□□□□□ -0.73
CHD3-202ENST00000358181 MRPL28Q13084 256 aaKnown RBP10.5□□□□□ -0.73
CHD3-202ENST00000358181 PDCLQ13371 301 aa10.5□□□□□ -0.73
CHD3-202ENST00000358181 PHKG1Q16816 387 aa10.5□□□□□ -0.73
CHD3-202ENST00000358181 SMC5Q8IY18 1101 aa10.5□□□□□ -0.73
CHD3-202ENST00000358181 SCYL3Q8IZE3 742 aa10.5□□□□□ -0.73
CHD3-202ENST00000358181 ARHGAP45Q92619 1136 aa10.5□□□□□ -0.73
CHD3-202ENST00000358181 FAM167BQ9BTA0 163 aa10.5□□□□□ -0.73
CHD3-202ENST00000358181 USP26Q9BXU7 913 aa10.5□□□□□ -0.73
CHD3-202ENST00000358181 TMEM161AQ9NX61 479 aa10.5□□□□□ -0.73
CHD3-202ENST00000358181 SLAIN2Q9P270 581 aa10.5□□□□□ -0.73
CHD3-202ENST00000358181 GDAQ9Y2T3 454 aa10.5□□□□□ -0.73
CHD3-202ENST00000358181 MAPK9P45984 424 aa10.5□□□□□ -0.73
CHD3-202ENST00000358181 NSFP46459 744 aaKnown RBP10.5□□□□□ -0.73
CHD3-202ENST00000358181 CFAP221Q4G0U5 840 aa10.5□□□□□ -0.73
CHD3-202ENST00000358181 ZNF668Q96K58 619 aaPredicted RBP10.5□□□□□ -0.73
CHD3-202ENST00000358181 NACC1Q96RE7 527 aa10.5□□□□□ -0.73
CHD3-202ENST00000358181 PCDHGA4Q9Y5G9 962 aa10.5□□□□□ -0.73
CHD3-202ENST00000358181 GSNP06396 782 aa10.5□□□□□ -0.73
CHD3-202ENST00000358181 DDIT3P35638 169 aa10.5□□□□□ -0.73
CHD3-202ENST00000358181 STAT1P42224 750 aa10.5□□□□□ -0.73
CHD3-202ENST00000358181 TRIM48Q8IWZ4 208 aa10.5□□□□□ -0.73
Retrieved 100 of 20,778 RNA–protein pairs in 32.1 ms