RNA–Protein interactions for RNA: ENST00000358025.7

SYNE2-204, Transcript of spectrin repeat containing nuclear envelope protein 2, humanhuman

APPRIS P3 TSL 5 BASIC

Gene SYNE2, Length 21,842 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE2-204ENST00000358025 CDKAL1Q5VV42 579 aa4.45□□□□□ -1.7
SYNE2-204ENST00000358025 BZW1Q7L1Q6 419 aaKnown RBP4.45□□□□□ -1.7
SYNE2-204ENST00000358025 TSNARE1Q96NA8 513 aa4.45□□□□□ -1.7
SYNE2-204ENST00000358025 CCDC113Q9H0I3 377 aa4.45□□□□□ -1.7
SYNE2-204ENST00000358025 PPANQ9NQ55 473 aaKnown RBP4.45□□□□□ -1.7
SYNE2-204ENST00000358025 FSCBQ5H9T9 825 aa4.45□□□□□ -1.7
SYNE2-204ENST00000358025 NAA35Q5VZE5 725 aa4.45□□□□□ -1.7
SYNE2-204ENST00000358025 SATB2Q9UPW6 733 aa4.45□□□□□ -1.7
SYNE2-204ENST00000358025 MYH11P35749 1972 aa4.45□□□□□ -1.7
SYNE2-204ENST00000358025 CPA3P15088 417 aa4.45□□□□□ -1.7
SYNE2-204ENST00000358025 ATP2C1P98194 919 aaPredicted RBP4.45□□□□□ -1.7
SYNE2-204ENST00000358025 CADPS2Q86UW7 1296 aa4.45□□□□□ -1.7
SYNE2-204ENST00000358025 TTC7AQ9ULT0 858 aaPredicted RBP4.45□□□□□ -1.7
SYNE2-204ENST00000358025 PBRM1Q86U86 1689 aa4.45□□□□□ -1.7
SYNE2-204ENST00000358025 ZFP1Q6P2D0 407 aa4.45□□□□□ -1.7
SYNE2-204ENST00000358025 RTCBQ9Y3I0 505 aaKnown RBP4.45□□□□□ -1.7
SYNE2-204ENST00000358025 CHRNA3P32297 505 aa4.45□□□□□ -1.7
SYNE2-204ENST00000358025 KRT26Q7Z3Y9 468 aa4.45□□□□□ -1.7
SYNE2-204ENST00000358025 OVOS2A0A0J9YW53 1432 aa4.45□□□□□ -1.7
SYNE2-204ENST00000358025 OVOS2Q6IE36 1432 aa4.45□□□□□ -1.7
SYNE2-204ENST00000358025 MYO1FO00160 1098 aa4.45□□□□□ -1.7
SYNE2-204ENST00000358025 CYP7A1P22680 504 aa4.45□□□□□ -1.7
SYNE2-204ENST00000358025 CUL4BQ13620 913 aa4.45□□□□□ -1.7
SYNE2-204ENST00000358025 BLIDQ8IZY5 108 aa4.45□□□□□ -1.7
SYNE2-204ENST00000358025 MADDQ8WXG6 1647 aa4.45□□□□□ -1.7
SYNE2-204ENST00000358025 PCDH11YQ9BZA8 1340 aa4.45□□□□□ -1.7
SYNE2-204ENST00000358025 PTPRUQ92729 1446 aa4.45□□□□□ -1.7
SYNE2-204ENST00000358025 TRPC4APQ8TEL6 797 aa4.45□□□□□ -1.7
SYNE2-204ENST00000358025 NLRP7Q8WX94 980 aa4.45□□□□□ -1.7
SYNE2-204ENST00000358025 ESCO1Q5FWF5 840 aa4.45□□□□□ -1.7
SYNE2-204ENST00000358025 ZNF654Q8IZM8 581 aa4.45□□□□□ -1.7
SYNE2-204ENST00000358025 XAGE2Q96GT9 111 aa4.45□□□□□ -1.7
SYNE2-204ENST00000358025 TPX2Q9ULW0 747 aaKnown RBP4.45□□□□□ -1.7
SYNE2-204ENST00000358025 TSPY3P0CV98 308 aa4.45□□□□□ -1.7
SYNE2-204ENST00000358025 TSPY8P0CW00 308 aa4.45□□□□□ -1.7
SYNE2-204ENST00000358025 PSMC2P35998 433 aaKnown RBP4.45□□□□□ -1.7
SYNE2-204ENST00000358025 CCNG1P51959 295 aa4.45□□□□□ -1.7
SYNE2-204ENST00000358025 OGFOD1Q8N543 542 aa4.45□□□□□ -1.7
SYNE2-204ENST00000358025 ZCRB1Q8TBF4 217 aaKnown RBP4.45□□□□□ -1.7
SYNE2-204ENST00000358025 KIAA1586Q9HCI6 787 aa4.45□□□□□ -1.7
SYNE2-204ENST00000358025 MTO1Q9Y2Z2 717 aaKnown RBP4.45□□□□□ -1.7
SYNE2-204ENST00000358025 NOP14P78316 857 aaKnown RBP4.45□□□□□ -1.7
SYNE2-204ENST00000358025 GPATCH4Q5T3I0 446 aaKnown RBP4.45□□□□□ -1.7
SYNE2-204ENST00000358025 RNF43Q68DV7 783 aa4.45□□□□□ -1.7
SYNE2-204ENST00000358025 TOGARAM2Q6ZUX3 1019 aa4.45□□□□□ -1.7
SYNE2-204ENST00000358025 HIC2Q96JB3 615 aa4.45□□□□□ -1.7
SYNE2-204ENST00000358025 TMBIM4Q9HC24 238 aa4.45□□□□□ -1.7
SYNE2-204ENST00000358025 EFCAB6Q5THR3 1501 aa4.45□□□□□ -1.7
SYNE2-204ENST00000358025 SOWAHDA6NJG2 315 aa4.45□□□□□ -1.7
SYNE2-204ENST00000358025 AFPP02771 609 aaKnown RBP4.45□□□□□ -1.7
SYNE2-204ENST00000358025 ATP1A3P13637 1013 aa4.45□□□□□ -1.7
SYNE2-204ENST00000358025 PRCPP42785 496 aa4.45□□□□□ -1.7
SYNE2-204ENST00000358025 MAGOHP61326 146 aaKnown RBP4.45□□□□□ -1.7
SYNE2-204ENST00000358025 ALDH16A1Q8IZ83 802 aa4.45□□□□□ -1.7
SYNE2-204ENST00000358025 CYFIP2Q96F07 1278 aa4.45□□□□□ -1.7
SYNE2-204ENST00000358025 NUF2Q9BZD4 464 aa4.45□□□□□ -1.7
SYNE2-204ENST00000358025 DMAP1Q9NPF5 467 aaPredicted RBP4.45□□□□□ -1.7
SYNE2-204ENST00000358025 LRRC7Q96NW7 1537 aa4.44□□□□□ -1.7
SYNE2-204ENST00000358025 KRT16P08779 473 aa4.44□□□□□ -1.7
SYNE2-204ENST00000358025 PRPF4BQ13523 1007 aaKnown RBP4.44□□□□□ -1.7
SYNE2-204ENST00000358025 CABP7Q86V35 215 aa4.44□□□□□ -1.7
SYNE2-204ENST00000358025 FAM20AQ96MK3 541 aa4.44□□□□□ -1.7
SYNE2-204ENST00000358025 MFSD5Q6N075 450 aa4.44□□□□□ -1.7
SYNE2-204ENST00000358025 XPO6Q96QU8 1125 aaKnown RBP4.44□□□□□ -1.7
SYNE2-204ENST00000358025 SH2D4AQ9H788 454 aa4.44□□□□□ -1.7
SYNE2-204ENST00000358025 UTP3Q9NQZ2 479 aaKnown RBP eCLIP4.44□□□□□ -1.7
SYNE2-204ENST00000358025 DNAJB4Q9UDY4 337 aa4.44□□□□□ -1.7
SYNE2-204ENST00000358025 IQGAP1P46940 1657 aa4.44□□□□□ -1.7
SYNE2-204ENST00000358025 MB21D2Q8IYB1 491 aaPredicted RBP4.44□□□□□ -1.7
SYNE2-204ENST00000358025 FAM186BQ8IYM0 893 aa4.44□□□□□ -1.7
SYNE2-204ENST00000358025 TTC16Q8NEE8 873 aa4.44□□□□□ -1.7
SYNE2-204ENST00000358025 MINDY4BA8MYZ0 360 aa4.44□□□□□ -1.7
SYNE2-204ENST00000358025 SEC31AO94979 1220 aaKnown RBP4.44□□□□□ -1.7
SYNE2-204ENST00000358025 LCA5Q86VQ0 697 aa4.44□□□□□ -1.7
SYNE2-204ENST00000358025 FAM207AQ9NSI2 230 aaPredicted RBP4.44□□□□□ -1.7
SYNE2-204ENST00000358025 GMNNO75496 209 aa4.44□□□□□ -1.7
SYNE2-204ENST00000358025 GCP02774 474 aa4.44□□□□□ -1.7
SYNE2-204ENST00000358025 RFFLQ8WZ73 363 aa4.44□□□□□ -1.7
SYNE2-204ENST00000358025 ZFRQ96KR1 1074 aaKnown RBP4.44□□□□□ -1.7
SYNE2-204ENST00000358025 TRIM15Q9C019 465 aa4.44□□□□□ -1.7
SYNE2-204ENST00000358025 SLC4A4Q9Y6R1 1079 aa4.44□□□□□ -1.7
SYNE2-204ENST00000358025 NFAT5O94916 1531 aa4.44□□□□□ -1.7
SYNE2-204ENST00000358025 GYG2O15488 501 aa4.44□□□□□ -1.7
SYNE2-204ENST00000358025 FAM13AO94988 1023 aa4.44□□□□□ -1.7
SYNE2-204ENST00000358025 ECEL1O95672 775 aa4.44□□□□□ -1.7
SYNE2-204ENST00000358025 MYL6BP14649 208 aa4.44□□□□□ -1.7
SYNE2-204ENST00000358025 MIER3Q7Z3K6 550 aa4.44□□□□□ -1.7
SYNE2-204ENST00000358025 ZNF446Q9NWS9 450 aa4.44□□□□□ -1.7
SYNE2-204ENST00000358025 SCHIP1Q9P0W5 487 aaPredicted RBP4.44□□□□□ -1.7
SYNE2-204ENST00000358025 ERBB3P21860 1342 aa4.44□□□□□ -1.7
SYNE2-204ENST00000358025 PNPLA7Q6ZV29 1317 aa4.44□□□□□ -1.7
SYNE2-204ENST00000358025 P4HA2O15460 535 aa4.44□□□□□ -1.7
SYNE2-204ENST00000358025 HADHAP40939 763 aa4.44□□□□□ -1.7
SYNE2-204ENST00000358025 FNTAP49354 379 aa4.44□□□□□ -1.7
SYNE2-204ENST00000358025 ZFATQ9P243 1243 aa4.44□□□□□ -1.7
SYNE2-204ENST00000358025 BUB1O43683 1085 aa4.44□□□□□ -1.7
SYNE2-204ENST00000358025 PPP2R3CQ969Q6 453 aa4.44□□□□□ -1.7
SYNE2-204ENST00000358025 KIFC2Q96AC6 838 aa4.44□□□□□ -1.7
SYNE2-204ENST00000358025 UVRAGQ9P2Y5 699 aa4.44□□□□□ -1.7
SYNE2-204ENST00000358025 AENQ8WTP8 325 aaKnown RBP4.44□□□□□ -1.7
Retrieved 100 of 20,778 RNA–protein pairs in 28.7 ms