RNA–Protein interactions for RNA: ENST00000357890.9

RNF40-202, Transcript of ring finger protein 40, humanhuman

TSL 2 BASIC

Gene RNF40, Length 3,917 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF40-202ENST00000357890 GRM4Q14833 912 aa10.91□□□□□ -0.66
RNF40-202ENST00000357890 SPDYE1Q8NFV5 336 aaPredicted RBP10.91□□□□□ -0.66
RNF40-202ENST00000357890 NOP53Q9NZM5 478 aaKnown RBP10.91□□□□□ -0.66
RNF40-202ENST00000357890 CCNL1Q9UK58 526 aaPredicted RBP10.91□□□□□ -0.66
RNF40-202ENST00000357890 HMGB1P1B2RPK0 211 aaPredicted RBP10.91□□□□□ -0.66
RNF40-202ENST00000357890 C6orf229H3BNL8 230 aa10.91□□□□□ -0.66
RNF40-202ENST00000357890 PSMD14O00487 310 aa10.91□□□□□ -0.66
RNF40-202ENST00000357890 PLEKP08567 350 aaPredicted RBP10.91□□□□□ -0.66
RNF40-202ENST00000357890 KCNB1Q14721 858 aa10.91□□□□□ -0.66
RNF40-202ENST00000357890 KIAA0753Q2KHM9 967 aa10.91□□□□□ -0.66
RNF40-202ENST00000357890 PREPLQ4J6C6 727 aaPredicted RBP10.91□□□□□ -0.66
RNF40-202ENST00000357890 TTMPQ5BVD1 217 aa10.91□□□□□ -0.66
RNF40-202ENST00000357890 RPUSD2Q8IZ73 545 aaKnown RBP10.91□□□□□ -0.66
RNF40-202ENST00000357890 SH3RF3Q8TEJ3 882 aaPredicted RBP10.91□□□□□ -0.66
RNF40-202ENST00000357890 NOD2Q9HC29 1040 aa10.91□□□□□ -0.66
RNF40-202ENST00000357890 DDX20Q9UHI6 824 aaKnown RBP10.91□□□□□ -0.66
RNF40-202ENST00000357890 NARFQ9UHQ1 456 aa10.91□□□□□ -0.66
RNF40-202ENST00000357890 FRMPD2Q68DX3 1309 aaPredicted RBP10.91□□□□□ -0.66
RNF40-202ENST00000357890 LRRD1A4D1F6 860 aa10.91□□□□□ -0.66
RNF40-202ENST00000357890 H0Y3Z8 333 aa10.91□□□□□ -0.66
RNF40-202ENST00000357890 EVI5O60447 810 aa10.91□□□□□ -0.66
RNF40-202ENST00000357890 CCNHP51946 323 aaPredicted RBP10.91□□□□□ -0.66
RNF40-202ENST00000357890 POLR2FP61218 127 aaKnown RBP10.91□□□□□ -0.66
RNF40-202ENST00000357890 HERC4Q5GLZ8 1057 aaPredicted RBP10.91□□□□□ -0.66
RNF40-202ENST00000357890 ZFYVE27Q5T4F4 411 aa10.91□□□□□ -0.66
RNF40-202ENST00000357890 CNBD1Q8NA66 436 aa10.91□□□□□ -0.66
RNF40-202ENST00000357890 LEMD3Q9Y2U8 911 aa10.91□□□□□ -0.66
RNF40-202ENST00000357890 GLI3P10071 1580 aa10.91□□□□□ -0.66
RNF40-202ENST00000357890 UPP2O95045 317 aa10.9□□□□□ -0.66
RNF40-202ENST00000357890 FAM107AO95990 144 aa10.9□□□□□ -0.66
RNF40-202ENST00000357890 VSIG1Q86XK7 387 aa10.9□□□□□ -0.66
RNF40-202ENST00000357890 SEC16BQ96JE7 1060 aa10.9□□□□□ -0.66
RNF40-202ENST00000357890 TMEM47Q9BQJ4 181 aa10.9□□□□□ -0.66
RNF40-202ENST00000357890 TRIM9Q9C026 710 aa10.9□□□□□ -0.66
RNF40-202ENST00000357890 BARHL2Q9NY43 387 aa10.9□□□□□ -0.66
RNF40-202ENST00000357890 UTP18Q9Y5J1 556 aaKnown RBP eCLIP10.9□□□□□ -0.66
RNF40-202ENST00000357890 FAM205AQ6ZU69 1335 aa10.9□□□□□ -0.66
RNF40-202ENST00000357890 GSTTP1A0A1W2PQM5 241 aa10.9□□□□□ -0.66
RNF40-202ENST00000357890 LRRC10BA6NIK2 292 aa10.9□□□□□ -0.66
RNF40-202ENST00000357890 UFL1O94874 794 aa10.9□□□□□ -0.66
RNF40-202ENST00000357890 SRGNP10124 158 aa10.9□□□□□ -0.66
RNF40-202ENST00000357890 PBX1P40424 430 aa10.9□□□□□ -0.66
RNF40-202ENST00000357890 KLHL30Q0D2K2 578 aa10.9□□□□□ -0.66
RNF40-202ENST00000357890 RPS6KA1Q15418 735 aa10.9□□□□□ -0.66
RNF40-202ENST00000357890 ARMC3Q5W041 872 aa10.9□□□□□ -0.66
RNF40-202ENST00000357890 APTXQ7Z2E3 356 aaKnown RBP10.9□□□□□ -0.66
RNF40-202ENST00000357890 KIF2BQ8N4N8 673 aa10.9□□□□□ -0.66
RNF40-202ENST00000357890 IFT74Q96LB3 600 aa10.9□□□□□ -0.66
RNF40-202ENST00000357890 TRIM4Q9C037 500 aa10.9□□□□□ -0.66
RNF40-202ENST00000357890 CCSER1Q9C0I3 900 aa10.9□□□□□ -0.66
RNF40-202ENST00000357890 MLXIPLQ9NP71 852 aa10.9□□□□□ -0.66
RNF40-202ENST00000357890 SNX12Q9UMY4 172 aa10.9□□□□□ -0.66
RNF40-202ENST00000357890 UBR2Q8IWV8 1755 aa10.9□□□□□ -0.66
RNF40-202ENST00000357890 FGRP09769 529 aa10.9□□□□□ -0.66
RNF40-202ENST00000357890 HERVK_113P62684 666 aa10.9□□□□□ -0.66
RNF40-202ENST00000357890 SFMBT2Q5VUG0 894 aa10.9□□□□□ -0.66
RNF40-202ENST00000357890 VPS36Q86VN1 386 aa10.9□□□□□ -0.66
RNF40-202ENST00000357890 DDX42Q86XP3 938 aaKnown RBP eCLIP10.9□□□□□ -0.66
RNF40-202ENST00000357890 LINC00116Q8NCU8 138 aa10.9□□□□□ -0.66
RNF40-202ENST00000357890 LARP4BQ92615 738 aaKnown RBP10.9□□□□□ -0.66
RNF40-202ENST00000357890 TNFRSF25Q93038 417 aa10.9□□□□□ -0.66
RNF40-202ENST00000357890 MTRQ99707 1265 aa10.9□□□□□ -0.66
RNF40-202ENST00000357890 KANSL2Q9H9L4 492 aa10.9□□□□□ -0.66
RNF40-202ENST00000357890 PCDHA6Q9UN73 950 aa10.9□□□□□ -0.66
RNF40-202ENST00000357890 PCDHA8Q9Y5H6 950 aa10.9□□□□□ -0.66
RNF40-202ENST00000357890 MYH15Q9Y2K3 1946 aa10.9□□□□□ -0.67
RNF40-202ENST00000357890 LRRC53A6NM62 1247 aa10.9□□□□□ -0.67
RNF40-202ENST00000357890 RGS16O15492 202 aaPredicted RBP10.9□□□□□ -0.67
RNF40-202ENST00000357890 RPS6KA4O75676 772 aa10.9□□□□□ -0.67
RNF40-202ENST00000357890 FSBPO95073 299 aa10.9□□□□□ -0.67
RNF40-202ENST00000357890 BTDP43251 543 aa10.9□□□□□ -0.67
RNF40-202ENST00000357890 GFPT1Q06210 699 aaPredicted RBP10.9□□□□□ -0.67
RNF40-202ENST00000357890 DHX9Q08211 1270 aaKnown RBP10.9□□□□□ -0.67
RNF40-202ENST00000357890 VWA3BQ502W6 1294 aa10.9□□□□□ -0.67
RNF40-202ENST00000357890 SLC10A5Q5PT55 438 aa10.9□□□□□ -0.67
RNF40-202ENST00000357890 TRAPPC3LQ5T215 181 aa10.9□□□□□ -0.67
RNF40-202ENST00000357890 ZSCAN29Q8IWY8 852 aaPredicted RBP10.9□□□□□ -0.67
RNF40-202ENST00000357890 MDM1Q8TC05 714 aa10.9□□□□□ -0.67
RNF40-202ENST00000357890 PARD3BQ8TEW8 1205 aa10.9□□□□□ -0.67
RNF40-202ENST00000357890 PIGSQ96S52 555 aa10.9□□□□□ -0.67
RNF40-202ENST00000357890 INTS9Q9NV88 658 aaKnown RBP10.9□□□□□ -0.67
RNF40-202ENST00000357890 MCM8Q9UJA3 840 aa10.9□□□□□ -0.67
RNF40-202ENST00000357890 COL16A1Q07092 1604 aaPredicted RBP10.89□□□□□ -0.67
RNF40-202ENST00000357890 MYH7P12883 1935 aa10.89□□□□□ -0.67
RNF40-202ENST00000357890 ANO9A1A5B4 782 aa10.89□□□□□ -0.67
RNF40-202ENST00000357890 RHOBTB3O94955 611 aa10.89□□□□□ -0.67
RNF40-202ENST00000357890 CACNB1Q02641 598 aaPredicted RBP10.89□□□□□ -0.67
RNF40-202ENST00000357890 SEMA3FQ13275 785 aa10.89□□□□□ -0.67
RNF40-202ENST00000357890 ZRSR2Q15696 482 aaKnown RBP10.89□□□□□ -0.67
RNF40-202ENST00000357890 IL17AQ16552 155 aa10.89□□□□□ -0.67
RNF40-202ENST00000357890 MAN2A1Q16706 1144 aa10.89□□□□□ -0.67
RNF40-202ENST00000357890 DCAF17Q5H9S7 520 aaPredicted RBP10.89□□□□□ -0.67
RNF40-202ENST00000357890 FUKQ8N0W3 1084 aa10.89□□□□□ -0.67
RNF40-202ENST00000357890 GIMAP8Q8ND71 665 aaPredicted RBP10.89□□□□□ -0.67
RNF40-202ENST00000357890 PIK3R5Q8WYR1 880 aa10.89□□□□□ -0.67
RNF40-202ENST00000357890 KRIT1O00522 736 aa10.89□□□□□ -0.67
RNF40-202ENST00000357890 CAND2O75155 1236 aa10.89□□□□□ -0.67
RNF40-202ENST00000357890 ANP32DO95626 131 aa10.89□□□□□ -0.67
RNF40-202ENST00000357890 FAM153BP0C7A2 387 aa10.89□□□□□ -0.67
RNF40-202ENST00000357890 SCTRP47872 440 aa10.89□□□□□ -0.67
Retrieved 100 of 20,778 RNA–protein pairs in 12.6 ms