RNA–Protein interactions for RNA: ENST00000357867.8

FN1-205, Transcript of fibronectin 1, humanhuman

TSL 1 (best) BASIC

Gene FN1, Length 7,898 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FN1-205ENST00000357867 VPS37BQ9H9H4 285 aa11.91□□□□□ -0.5
FN1-205ENST00000357867 EBAG9O00559 213 aa11.91□□□□□ -0.5
FN1-205ENST00000357867 PFKFB1P16118 471 aa11.91□□□□□ -0.5
FN1-205ENST00000357867 CMA1P23946 247 aa11.91□□□□□ -0.5
FN1-205ENST00000357867 PTH1RQ03431 593 aa11.91□□□□□ -0.5
FN1-205ENST00000357867 ZBTB5O15062 677 aa11.91□□□□□ -0.5
FN1-205ENST00000357867 POLR2FP61218 127 aaKnown RBP11.91□□□□□ -0.5
FN1-205ENST00000357867 RPGRIP1Q96KN7 1286 aa11.91□□□□□ -0.5
FN1-205ENST00000357867 PPP1R16BQ96T49 567 aa11.91□□□□□ -0.5
FN1-205ENST00000357867 MYH13Q9UKX3 1938 aa11.91□□□□□ -0.5
FN1-205ENST00000357867 HUS1O60921 280 aa11.91□□□□□ -0.5
FN1-205ENST00000357867 PPP6R2O75170 966 aa11.91□□□□□ -0.5
FN1-205ENST00000357867 GPSM2P81274 684 aa11.91□□□□□ -0.5
FN1-205ENST00000357867 FKBP3Q00688 224 aaKnown RBP11.91□□□□□ -0.5
FN1-205ENST00000357867 SCRN1Q12765 414 aa11.91□□□□□ -0.5
FN1-205ENST00000357867 STYK1Q6J9G0 422 aa11.91□□□□□ -0.5
FN1-205ENST00000357867 CEP57Q86XR8 500 aa11.91□□□□□ -0.5
FN1-205ENST00000357867 SPDYE1Q8NFV5 336 aaPredicted RBP11.91□□□□□ -0.5
FN1-205ENST00000357867 GCNT4Q9P109 453 aa11.91□□□□□ -0.5
FN1-205ENST00000357867 CYP19A1P11511 503 aaPredicted RBP11.91□□□□□ -0.5
FN1-205ENST00000357867 PMLP29590 882 aa11.91□□□□□ -0.5
FN1-205ENST00000357867 GTF2F1P35269 517 aaKnown RBP eCLIP11.91□□□□□ -0.54e-10■■■■□ 25.6
FN1-205ENST00000357867 CEP85LQ5SZL2 805 aa11.91□□□□□ -0.5
FN1-205ENST00000357867 C10orf76Q5T2E6 689 aa11.91□□□□□ -0.5
FN1-205ENST00000357867 GCOM2Q9BZD3 368 aaPredicted RBP11.91□□□□□ -0.5
FN1-205ENST00000357867 ZNF302Q9NR11 478 aa11.91□□□□□ -0.5
FN1-205ENST00000357867 HPDP32754 393 aaPredicted RBP11.9□□□□□ -0.5
FN1-205ENST00000357867 RCSD1Q6JBY9 416 aa11.9□□□□□ -0.5
FN1-205ENST00000357867 GPR101Q96P66 508 aaPredicted RBP11.9□□□□□ -0.5
FN1-205ENST00000357867 DDX50Q9BQ39 737 aaKnown RBP11.9□□□□□ -0.5
FN1-205ENST00000357867 TRPV6Q9H1D0 765 aa11.9□□□□□ -0.5
FN1-205ENST00000357867 RPAP3Q9H6T3 665 aaPredicted RBP11.9□□□□□ -0.5
FN1-205ENST00000357867 ZSWIM5Q9P217 1185 aa11.9□□□□□ -0.5
FN1-205ENST00000357867 STAP2Q9UGK3 403 aa11.9□□□□□ -0.5
FN1-205ENST00000357867 KRIT1O00522 736 aa11.9□□□□□ -0.5
FN1-205ENST00000357867 B4GALNT4Q76KP1 1039 aa11.9□□□□□ -0.5
FN1-205ENST00000357867 KIF1AQ12756 1690 aa11.9□□□□□ -0.5
FN1-205ENST00000357867 RARBP10826 455 aa11.9□□□□□ -0.5
FN1-205ENST00000357867 MTX1Q13505 466 aa11.9□□□□□ -0.5
FN1-205ENST00000357867 DNAJC21Q5F1R6 531 aaKnown RBP11.9□□□□□ -0.5
FN1-205ENST00000357867 CA4P22748 312 aa11.9□□□□□ -0.5
FN1-205ENST00000357867 RFX6Q8HWS3 928 aa11.9□□□□□ -0.5
FN1-205ENST00000357867 FBXO18Q8NFZ0 1043 aa11.9□□□□□ -0.5
FN1-205ENST00000357867 PSPC1Q8WXF1 523 aaKnown RBP11.9□□□□□ -0.5
FN1-205ENST00000357867 KCNK3O14649 394 aa11.9□□□□□ -0.5
FN1-205ENST00000357867 PPFIA4O75335 1185 aa11.9□□□□□ -0.5
FN1-205ENST00000357867 TMTC4Q5T4D3 741 aa11.9□□□□□ -0.5
FN1-205ENST00000357867 LPAR1Q92633 364 aa11.9□□□□□ -0.5
FN1-205ENST00000357867 RAVER2Q9HCJ3 691 aaKnown RBP11.9□□□□□ -0.5
FN1-205ENST00000357867 FRMD4AQ9P2Q2 1039 aaPredicted RBP11.9□□□□□ -0.5
FN1-205ENST00000357867 CDHR2Q9BYE9 1310 aa11.9□□□□□ -0.5
FN1-205ENST00000357867 C19orf81C9J6K1 198 aa11.9□□□□□ -0.5
FN1-205ENST00000357867 RPS12P25398 132 aaKnown RBP11.9□□□□□ -0.5
FN1-205ENST00000357867 KRT76Q01546 638 aa11.9□□□□□ -0.5
FN1-205ENST00000357867 DYNLL2Q96FJ2 89 aa11.9□□□□□ -0.5
FN1-205ENST00000357867 CNOT6LQ96LI5 555 aaKnown RBP11.9□□□□□ -0.5
FN1-205ENST00000357867 TRAPPC3O43617 180 aa11.9□□□□□ -0.51
FN1-205ENST00000357867 PLA2G4BP0C869 781 aa11.9□□□□□ -0.51
FN1-205ENST00000357867 MAPK4P31152 587 aa11.9□□□□□ -0.51
FN1-205ENST00000357867 PPFIA1Q13136 1202 aa11.9□□□□□ -0.51
FN1-205ENST00000357867 CCNYQ8ND76 341 aa11.9□□□□□ -0.51
FN1-205ENST00000357867 AFG1LQ8WV93 481 aa11.9□□□□□ -0.51
FN1-205ENST00000357867 STAG1Q8WVM7 1258 aa11.9□□□□□ -0.51
FN1-205ENST00000357867 ZNF148Q9UQR1 794 aa11.9□□□□□ -0.51
FN1-205ENST00000357867 CHRNA5P30532 468 aa11.89□□□□□ -0.51
FN1-205ENST00000357867 DDIT3P35638 169 aa11.89□□□□□ -0.51
FN1-205ENST00000357867 CACNB3P54284 484 aa11.89□□□□□ -0.51
FN1-205ENST00000357867 ZNF568Q3ZCX4 644 aa11.89□□□□□ -0.51
FN1-205ENST00000357867 DNAJC24Q6P3W2 148 aa11.89□□□□□ -0.51
FN1-205ENST00000357867 TSPYL2Q9H2G4 693 aaPredicted RBP11.89□□□□□ -0.51
FN1-205ENST00000357867 CBX8Q9HC52 389 aa11.89□□□□□ -0.51
FN1-205ENST00000357867 NEMP1O14524 444 aa11.89□□□□□ -0.51
FN1-205ENST00000357867 PRPF3O43395 683 aaKnown RBP11.89□□□□□ -0.51
FN1-205ENST00000357867 PRPSAP2O60256 369 aa11.89□□□□□ -0.51
FN1-205ENST00000357867 PPP1R18Q6NYC8 613 aa11.89□□□□□ -0.51
FN1-205ENST00000357867 DNAAF3Q8N9W5 541 aa11.89□□□□□ -0.51
FN1-205ENST00000357867 N4BP2L2Q92802 583 aaPredicted RBP11.89□□□□□ -0.51
FN1-205ENST00000357867 VPS18Q9P253 973 aa11.89□□□□□ -0.51
FN1-205ENST00000357867 BAG5Q9UL15 447 aa11.89□□□□□ -0.51
FN1-205ENST00000357867 USP32Q8NFA0 1604 aa11.89□□□□□ -0.51
FN1-205ENST00000357867 MYH3P11055 1940 aa11.89□□□□□ -0.51
FN1-205ENST00000357867 SAT1P21673 171 aa11.89□□□□□ -0.51
FN1-205ENST00000357867 KRBA2Q6ZNG9 492 aa11.89□□□□□ -0.51
FN1-205ENST00000357867 MICALL2Q8IY33 904 aa11.89□□□□□ -0.51
FN1-205ENST00000357867 DYRK4Q9NR20 520 aa11.89□□□□□ -0.51
FN1-205ENST00000357867 RNF146Q9NTX7 359 aa11.89□□□□□ -0.51
FN1-205ENST00000357867 PCDHA6Q9UN73 950 aa11.89□□□□□ -0.51
FN1-205ENST00000357867 PCDHA8Q9Y5H6 950 aa11.89□□□□□ -0.51
FN1-205ENST00000357867 MAD1L1Q9Y6D9 718 aa11.89□□□□□ -0.51
FN1-205ENST00000357867 CETPP11597 493 aa11.89□□□□□ -0.51
FN1-205ENST00000357867 ATF2P15336 505 aa11.89□□□□□ -0.51
FN1-205ENST00000357867 PAMP19021 973 aa11.89□□□□□ -0.51
FN1-205ENST00000357867 KLHL7Q8IXQ5 586 aa11.89□□□□□ -0.51
FN1-205ENST00000357867 PPFIBP2Q8ND30 876 aa11.89□□□□□ -0.51
FN1-205ENST00000357867 ZNF280CQ8ND82 737 aa11.89□□□□□ -0.51
FN1-205ENST00000357867 CHMP6Q96FZ7 201 aa11.89□□□□□ -0.51
FN1-205ENST00000357867 SPATA31A1Q5TZJ5 1347 aa11.89□□□□□ -0.51
FN1-205ENST00000357867 TFRCP02786 760 aaKnown RBP11.89□□□□□ -0.51
FN1-205ENST00000357867 MMP1P03956 469 aa11.89□□□□□ -0.51
FN1-205ENST00000357867 NXNQ6DKJ4 435 aa11.89□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 20.9 ms