RNA–Protein interactions for RNA: ENST00000357348.9

RTFDC1-202, Transcript of Protein RTF2 homolog, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RTFDC1, Length 2,212 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTFDC1-202ENST00000357348 RIC8AQ9NPQ8 531 aa14.07□□□□□ -0.16
RTFDC1-202ENST00000357348 TRPM7Q96QT4 1865 aa14.07□□□□□ -0.16
RTFDC1-202ENST00000357348 A0A0G2JLL6 359 aaPredicted RBP14.06□□□□□ -0.16
RTFDC1-202ENST00000357348 TARSL2A2RTX5 802 aaKnown RBP14.06□□□□□ -0.16
RTFDC1-202ENST00000357348 VWA5AO00534 786 aa14.06□□□□□ -0.16
RTFDC1-202ENST00000357348 OPLAHO14841 1288 aa14.06□□□□□ -0.16
RTFDC1-202ENST00000357348 PLA2G6O60733 806 aa14.06□□□□□ -0.16
RTFDC1-202ENST00000357348 HUNKP57058 714 aa14.06□□□□□ -0.16
RTFDC1-202ENST00000357348 PPIL2Q13356 520 aa14.06□□□□□ -0.16
RTFDC1-202ENST00000357348 COG2Q14746 738 aa14.06□□□□□ -0.16
RTFDC1-202ENST00000357348 LETM2Q2VYF4 491 aa14.06□□□□□ -0.16
RTFDC1-202ENST00000357348 SH3D19Q5HYK7 790 aa14.06□□□□□ -0.16
RTFDC1-202ENST00000357348 PAPD7Q5XG87 772 aaKnown RBP14.06□□□□□ -0.16
RTFDC1-202ENST00000357348 PRRT2Q7Z6L0 340 aaPredicted RBP14.06□□□□□ -0.16
RTFDC1-202ENST00000357348 TBCKQ8TEA7 893 aa14.06□□□□□ -0.16
RTFDC1-202ENST00000357348 SLC38A10Q9HBR0 1119 aa14.06□□□□□ -0.16
RTFDC1-202ENST00000357348 MYH7BA7E2Y1 1941 aa14.06□□□□□ -0.16
RTFDC1-202ENST00000357348 MRPL12P52815 198 aaKnown RBP14.06□□□□□ -0.16
RTFDC1-202ENST00000357348 TTC38Q5R3I4 469 aa14.06□□□□□ -0.16
RTFDC1-202ENST00000357348 GALNT17Q6IS24 598 aa14.06□□□□□ -0.16
RTFDC1-202ENST00000357348 FOXR1Q6PIV2 292 aa14.06□□□□□ -0.16
RTFDC1-202ENST00000357348 DAGLBQ8NCG7 672 aa14.06□□□□□ -0.16
RTFDC1-202ENST00000357348 RPGRIP1Q96KN7 1286 aa14.06□□□□□ -0.16
RTFDC1-202ENST00000357348 UIMC1Q96RL1 719 aa14.06□□□□□ -0.16
RTFDC1-202ENST00000357348 HAUS4Q9H6D7 363 aa14.06□□□□□ -0.16
RTFDC1-202ENST00000357348 ESYT2A0FGR8 921 aa14.05□□□□□ -0.16
RTFDC1-202ENST00000357348 MEIS2O14770 477 aa14.05□□□□□ -0.16
RTFDC1-202ENST00000357348 N4BP3O15049 544 aa14.05□□□□□ -0.16
RTFDC1-202ENST00000357348 CASP1P29466 404 aa14.05□□□□□ -0.16
RTFDC1-202ENST00000357348 DSG3P32926 999 aa14.05□□□□□ -0.16
RTFDC1-202ENST00000357348 CORO7P57737 925 aa14.05□□□□□ -0.16
RTFDC1-202ENST00000357348 NONOQ15233 471 aaKnown RBP eCLIP14.05□□□□□ -0.16
RTFDC1-202ENST00000357348 TCP11X2Q5H9J9 407 aa14.05□□□□□ -0.16
RTFDC1-202ENST00000357348 SMYD4Q8IYR2 804 aaPredicted RBP14.05□□□□□ -0.16
RTFDC1-202ENST00000357348 P2RX7Q99572 595 aaKnown RBP14.05□□□□□ -0.16
RTFDC1-202ENST00000357348 PYM1Q9BRP8 204 aaKnown RBP14.05□□□□□ -0.16
RTFDC1-202ENST00000357348 CTNND2Q9UQB3 1225 aa14.05□□□□□ -0.16
RTFDC1-202ENST00000357348 RIPK3Q9Y572 518 aa14.05□□□□□ -0.16
RTFDC1-202ENST00000357348 EPN1Q9Y6I3 576 aaPredicted RBP14.05□□□□□ -0.16
RTFDC1-202ENST00000357348 SPDYE16A6NNV3 312 aaPredicted RBP14.05□□□□□ -0.16
RTFDC1-202ENST00000357348 NFIBO00712 420 aa14.05□□□□□ -0.16
RTFDC1-202ENST00000357348 CXCL11O14625 94 aa14.05□□□□□ -0.16
RTFDC1-202ENST00000357348 KIF3CO14782 793 aa14.05□□□□□ -0.16
RTFDC1-202ENST00000357348 ZBED4O75132 1171 aa14.05□□□□□ -0.16
RTFDC1-202ENST00000357348 NDUFA10O95299 355 aa14.05□□□□□ -0.16
RTFDC1-202ENST00000357348 ICAM1P05362 532 aa14.05□□□□□ -0.16
RTFDC1-202ENST00000357348 ATP2C1P98194 919 aaPredicted RBP14.05□□□□□ -0.16
RTFDC1-202ENST00000357348 PPP1R18Q6NYC8 613 aa14.05□□□□□ -0.16
RTFDC1-202ENST00000357348 PDXDC2PQ6P474 469 aa14.05□□□□□ -0.16
RTFDC1-202ENST00000357348 CCDC102AQ96A19 550 aa14.05□□□□□ -0.16
RTFDC1-202ENST00000357348 DNAJC7Q99615 494 aa14.05□□□□□ -0.16
RTFDC1-202ENST00000357348 FAM204AQ9H8W3 233 aa14.05□□□□□ -0.16
RTFDC1-202ENST00000357348 HPCAL4Q9UM19 191 aa14.05□□□□□ -0.16
RTFDC1-202ENST00000357348 A0A1W2PQC6 194 aa14.04□□□□□ -0.16
RTFDC1-202ENST00000357348 EIF3CLB5ME19 914 aaKnown RBP14.04□□□□□ -0.16
RTFDC1-202ENST00000357348 GTPBP6O43824 516 aaPredicted RBP14.04□□□□□ -0.16
RTFDC1-202ENST00000357348 CCNT1O60563 726 aaKnown RBP14.04□□□□□ -0.16
RTFDC1-202ENST00000357348 PPFIA4O75335 1185 aa14.04□□□□□ -0.16
RTFDC1-202ENST00000357348 CPP00450 1065 aa14.04□□□□□ -0.16
RTFDC1-202ENST00000357348 KRT9P35527 623 aa14.04□□□□□ -0.16
RTFDC1-202ENST00000357348 UBXN2AP68543 259 aa14.04□□□□□ -0.16
RTFDC1-202ENST00000357348 GRM1Q13255 1194 aa14.04□□□□□ -0.16
RTFDC1-202ENST00000357348 TMEM132BQ14DG7 1078 aa14.04□□□□□ -0.16
RTFDC1-202ENST00000357348 MAP9Q49MG5 647 aa14.04□□□□□ -0.16
RTFDC1-202ENST00000357348 NCAPH2Q6IBW4 605 aa14.04□□□□□ -0.16
RTFDC1-202ENST00000357348 GOLGA6L1Q8N7Z2 621 aa14.04□□□□□ -0.16
RTFDC1-202ENST00000357348 ZFP91Q96JP5 570 aaPredicted RBP14.04□□□□□ -0.16
RTFDC1-202ENST00000357348 EIF3CQ99613 913 aaKnown RBP14.04□□□□□ -0.16
RTFDC1-202ENST00000357348 PAGR1Q9BTK6 254 aa14.04□□□□□ -0.16
RTFDC1-202ENST00000357348 KCNH4Q9UQ05 1017 aa14.04□□□□□ -0.16
RTFDC1-202ENST00000357348 RNF40O75150 1001 aa14.03□□□□□ -0.16
RTFDC1-202ENST00000357348 CDC25AP30304 524 aa14.03□□□□□ -0.16
RTFDC1-202ENST00000357348 CCT6AP40227 531 aaKnown RBP14.03□□□□□ -0.16
RTFDC1-202ENST00000357348 CLK2P49760 499 aaKnown RBP14.03□□□□□ -0.16
RTFDC1-202ENST00000357348 IRX3P78415 501 aaPredicted RBP14.03□□□□□ -0.16
RTFDC1-202ENST00000357348 PAK1Q13153 545 aa14.03□□□□□ -0.16
RTFDC1-202ENST00000357348 SNRNP48Q6IEG0 339 aaKnown RBP14.03□□□□□ -0.16
RTFDC1-202ENST00000357348 KRT25Q7Z3Z0 450 aa14.03□□□□□ -0.16
RTFDC1-202ENST00000357348 MTRQ99707 1265 aa14.03□□□□□ -0.16
RTFDC1-202ENST00000357348 LOC285556D6RIA3 1793 aa14.03□□□□□ -0.16
RTFDC1-202ENST00000357348 KCNJ18B7U540 433 aa14.03□□□□□ -0.16
RTFDC1-202ENST00000357348 SHOX2O60902 331 aaPredicted RBP14.03□□□□□ -0.16
RTFDC1-202ENST00000357348 PTGDRQ13258 359 aa14.03□□□□□ -0.16
RTFDC1-202ENST00000357348 SNAPC2Q13487 334 aa14.03□□□□□ -0.16
RTFDC1-202ENST00000357348 KCNJ12Q14500 433 aa14.03□□□□□ -0.16
RTFDC1-202ENST00000357348 ZNF658Q5TYW1 1059 aaPredicted RBP14.03□□□□□ -0.16
RTFDC1-202ENST00000357348 POTEEQ6S8J3 1075 aa14.03□□□□□ -0.16
RTFDC1-202ENST00000357348 PROCA1Q8NCQ7 364 aaPredicted RBP14.03□□□□□ -0.16
RTFDC1-202ENST00000357348 AFAP1L1Q8TED9 768 aa14.03□□□□□ -0.16
RTFDC1-202ENST00000357348 CHP1Q99653 195 aa14.03□□□□□ -0.16
RTFDC1-202ENST00000357348 ASCC2Q9H1I8 757 aaPredicted RBP14.03□□□□□ -0.16
RTFDC1-202ENST00000357348 HOXC10Q9NYD6 342 aa14.03□□□□□ -0.16
RTFDC1-202ENST00000357348 CYP2C8P10632 490 aa14.02□□□□□ -0.16
RTFDC1-202ENST00000357348 TNNT3P45378 269 aaPredicted RBP14.02□□□□□ -0.16
RTFDC1-202ENST00000357348 HERVK_113P62684 666 aa14.02□□□□□ -0.16
RTFDC1-202ENST00000357348 FKBP1BP68106 108 aa14.02□□□□□ -0.16
RTFDC1-202ENST00000357348 MOGSQ13724 837 aa14.02□□□□□ -0.16
RTFDC1-202ENST00000357348 MEA1Q16626 185 aa14.02□□□□□ -0.16
RTFDC1-202ENST00000357348 RRAGBQ5VZM2 374 aa14.02□□□□□ -0.16
RTFDC1-202ENST00000357348 NEK8Q86SG6 692 aa14.02□□□□□ -0.16
Retrieved 100 of 20,778 RNA–protein pairs in 40.6 ms