RNA–Protein interactions for RNA: ENST00000357085.4

TRIM38-201, Transcript of tripartite motif containing 38, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TRIM38, Length 9,413 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM38-201ENST00000357085 FAF1Q9UNN5 650 aaPredicted RBP7.12□□□□□ -1.27
TRIM38-201ENST00000357085 NOVA2Q9UNW9 492 aaKnown RBP7.12□□□□□ -1.27
TRIM38-201ENST00000357085 PCDHA13Q9Y5I0 950 aa7.12□□□□□ -1.27
TRIM38-201ENST00000357085 CDR2Q01850 454 aa7.12□□□□□ -1.27
TRIM38-201ENST00000357085 TRIM74Q86UV6 250 aa7.12□□□□□ -1.27
TRIM38-201ENST00000357085 TRIM73Q86UV7 250 aa7.12□□□□□ -1.27
TRIM38-201ENST00000357085 NBPF15Q8N660 670 aa7.12□□□□□ -1.27
TRIM38-201ENST00000357085 NR1H4Q96RI1 486 aaPredicted RBP7.12□□□□□ -1.27
TRIM38-201ENST00000357085 ERGIC2Q96RQ1 377 aa7.12□□□□□ -1.27
TRIM38-201ENST00000357085 SH3GL2Q99962 352 aa7.12□□□□□ -1.27
TRIM38-201ENST00000357085 PSMC4P43686 418 aa7.11□□□□□ -1.27
TRIM38-201ENST00000357085 XRCC4Q13426 336 aa7.11□□□□□ -1.27
TRIM38-201ENST00000357085 AKNAD1Q5T1N1 836 aa7.11□□□□□ -1.27
TRIM38-201ENST00000357085 IFNL2Q8IZJ0 200 aa7.11□□□□□ -1.27
TRIM38-201ENST00000357085 SPATA4Q8NEY3 305 aa7.11□□□□□ -1.27
TRIM38-201ENST00000357085 PPP1R14CQ8TAE6 165 aa7.11□□□□□ -1.27
TRIM38-201ENST00000357085 SH3TC2Q8TF17 1288 aa7.11□□□□□ -1.27
TRIM38-201ENST00000357085 NAF1Q96HR8 494 aaKnown RBP7.11□□□□□ -1.27
TRIM38-201ENST00000357085 TSNARE1Q96NA8 513 aa7.11□□□□□ -1.27
TRIM38-201ENST00000357085 CATSPER2Q96P56 530 aa7.11□□□□□ -1.27
TRIM38-201ENST00000357085 SATB2Q9UPW6 733 aa7.11□□□□□ -1.27
TRIM38-201ENST00000357085 NVLO15381 856 aaKnown RBP7.11□□□□□ -1.27
TRIM38-201ENST00000357085 RNF8O76064 485 aa7.11□□□□□ -1.27
TRIM38-201ENST00000357085 RTN3O95197 1032 aaPredicted RBP7.11□□□□□ -1.27
TRIM38-201ENST00000357085 EIF4A1P60842 406 aaKnown RBP7.11□□□□□ -1.27
TRIM38-201ENST00000357085 MAGOHP61326 146 aaKnown RBP7.11□□□□□ -1.27
TRIM38-201ENST00000357085 ATXN2LQ8WWM7 1075 aaKnown RBP7.11□□□□□ -1.27
TRIM38-201ENST00000357085 ATP2A3Q93084 1043 aa7.11□□□□□ -1.27
TRIM38-201ENST00000357085 HPS3Q969F9 1004 aa7.11□□□□□ -1.27
TRIM38-201ENST00000357085 MAGOHBQ96A72 148 aaKnown RBP7.11□□□□□ -1.27
TRIM38-201ENST00000357085 ALKBH8Q96BT7 664 aaKnown RBP7.11□□□□□ -1.27
TRIM38-201ENST00000357085 ZFRQ96KR1 1074 aaKnown RBP7.11□□□□□ -1.27
TRIM38-201ENST00000357085 LRRC37BQ96QE4 947 aa7.11□□□□□ -1.27
TRIM38-201ENST00000357085 TMEM2Q9UHN6 1383 aa7.11□□□□□ -1.27
TRIM38-201ENST00000357085 SLC16A3O15427 465 aaKnown RBP7.11□□□□□ -1.27
TRIM38-201ENST00000357085 LDHCP07864 332 aa7.11□□□□□ -1.27
TRIM38-201ENST00000357085 GCLCP48506 637 aaPredicted RBP7.11□□□□□ -1.27
TRIM38-201ENST00000357085 ANKRD20A4Q4UJ75 823 aa7.11□□□□□ -1.27
TRIM38-201ENST00000357085 ANKRD20A2Q5SQ80 823 aa7.11□□□□□ -1.27
TRIM38-201ENST00000357085 ANKRD20A1Q5TYW2 823 aa7.11□□□□□ -1.27
TRIM38-201ENST00000357085 METTL16Q86W50 562 aaKnown RBP7.11□□□□□ -1.27
TRIM38-201ENST00000357085 SYMPKQ92797 1274 aaKnown RBP7.11□□□□□ -1.27
TRIM38-201ENST00000357085 NRDE2Q9H7Z3 1164 aa7.11□□□□□ -1.27
TRIM38-201ENST00000357085 SLC4A7Q9Y6M7 1214 aa7.11□□□□□ -1.27
TRIM38-201ENST00000357085 BTNL10A8MVZ5 291 aa7.11□□□□□ -1.27
TRIM38-201ENST00000357085 CYP21A2P08686 494 aa7.11□□□□□ -1.27
TRIM38-201ENST00000357085 CYLC2Q14093 348 aaPredicted RBP7.11□□□□□ -1.27
TRIM38-201ENST00000357085 GSTA3Q16772 222 aa7.11□□□□□ -1.27
TRIM38-201ENST00000357085 ZNF589Q86UQ0 364 aaPredicted RBP7.11□□□□□ -1.27
TRIM38-201ENST00000357085 TXNDC2Q86VQ3 553 aa7.11□□□□□ -1.27
TRIM38-201ENST00000357085 NFATC2IPQ8NCF5 419 aa7.11□□□□□ -1.27
TRIM38-201ENST00000357085 DNAJC9Q8WXX5 260 aa7.11□□□□□ -1.27
TRIM38-201ENST00000357085 PGM2Q96G03 612 aa7.11□□□□□ -1.27
TRIM38-201ENST00000357085 MMADHCQ9H3L0 296 aaPredicted RBP7.11□□□□□ -1.27
TRIM38-201ENST00000357085 RMI1Q9H9A7 625 aa7.11□□□□□ -1.27
TRIM38-201ENST00000357085 MYO5AQ9Y4I1 1855 aaKnown RBP7.11□□□□□ -1.27
TRIM38-201ENST00000357085 NCAPHQ15003 741 aa7.11□□□□□ -1.27
TRIM38-201ENST00000357085 CWF19L1Q69YN2 538 aaKnown RBP7.11□□□□□ -1.27
TRIM38-201ENST00000357085 INPP5DQ92835 1189 aa7.11□□□□□ -1.27
TRIM38-201ENST00000357085 HINFPQ9BQA5 517 aa7.11□□□□□ -1.27
TRIM38-201ENST00000357085 BHMT2Q9H2M3 363 aa7.11□□□□□ -1.27
TRIM38-201ENST00000357085 WASHC2DQ5SRD0 308 aa7.11□□□□□ -1.27
TRIM38-201ENST00000357085 POTEAQ6S8J7 498 aa7.11□□□□□ -1.27
TRIM38-201ENST00000357085 MYD88Q99836 296 aa7.11□□□□□ -1.27
TRIM38-201ENST00000357085 CNOT7Q9UIV1 285 aaKnown RBP7.11□□□□□ -1.27
TRIM38-201ENST00000357085 ZNF609O15014 1411 aa7.11□□□□□ -1.27
TRIM38-201ENST00000357085 PDLIM1O00151 329 aa7.11□□□□□ -1.27
TRIM38-201ENST00000357085 SEC24CP53992 1094 aa7.11□□□□□ -1.27
TRIM38-201ENST00000357085 MCF2L2Q86YR7 1114 aa7.11□□□□□ -1.27
TRIM38-201ENST00000357085 MB21D2Q8IYB1 491 aaPredicted RBP7.11□□□□□ -1.27
TRIM38-201ENST00000357085 SYCP3Q8IZU3 236 aa7.11□□□□□ -1.27
TRIM38-201ENST00000357085 ATL2Q8NHH9 583 aa7.11□□□□□ -1.27
TRIM38-201ENST00000357085 KCNV2Q8TDN2 545 aa7.11□□□□□ -1.27
TRIM38-201ENST00000357085 NLRP2Q9NX02 1062 aa7.11□□□□□ -1.27
TRIM38-201ENST00000357085 ARPP21Q9UBL0 812 aaPredicted RBP7.11□□□□□ -1.27
TRIM38-201ENST00000357085 DUOX1Q9NRD9 1551 aa7.11□□□□□ -1.27
TRIM38-201ENST00000357085 RICTORQ6R327 1708 aa7.11□□□□□ -1.27
TRIM38-201ENST00000357085 IGF2BP3O00425 579 aaKnown RBP eCLIP7.1□□□□□ -1.27
TRIM38-201ENST00000357085 ESRRGP62508 458 aa7.1□□□□□ -1.27
TRIM38-201ENST00000357085 EMC10Q5UCC4 262 aa7.1□□□□□ -1.27
TRIM38-201ENST00000357085 KLC3Q6P597 504 aa7.1□□□□□ -1.27
TRIM38-201ENST00000357085 OPTNQ96CV9 577 aa7.1□□□□□ -1.27
TRIM38-201ENST00000357085 ANKIB1Q9P2G1 1089 aa7.1□□□□□ -1.27
TRIM38-201ENST00000357085 ORC4O43929 436 aa7.1□□□□□ -1.27
TRIM38-201ENST00000357085 ECEL1O95672 775 aa7.1□□□□□ -1.27
TRIM38-201ENST00000357085 FESP07332 822 aa7.1□□□□□ -1.27
TRIM38-201ENST00000357085 NQO1P15559 274 aaKnown RBP7.1□□□□□ -1.27
TRIM38-201ENST00000357085 STMN1P16949 149 aa7.1□□□□□ -1.27
TRIM38-201ENST00000357085 RNASE9P60153 205 aaKnown RBP7.1□□□□□ -1.27
TRIM38-201ENST00000357085 AP2B1P63010 937 aa7.1□□□□□ -1.27
TRIM38-201ENST00000357085 ELF3P78545 371 aaPredicted RBP7.1□□□□□ -1.27
TRIM38-201ENST00000357085 USH1GQ495M9 461 aa7.1□□□□□ -1.27
TRIM38-201ENST00000357085 ZIM3Q96PE6 472 aa7.1□□□□□ -1.27
TRIM38-201ENST00000357085 LRRC1Q9BTT6 524 aa7.1□□□□□ -1.27
TRIM38-201ENST00000357085 COMMD3-BMI1R4GMX3 469 aa7.1□□□□□ -1.27
TRIM38-201ENST00000357085 NID2Q14112 1375 aa7.1□□□□□ -1.27
TRIM38-201ENST00000357085 H0YCG3 227 aa7.1□□□□□ -1.27
TRIM38-201ENST00000357085 RAD21O60216 631 aa7.1□□□□□ -1.27
TRIM38-201ENST00000357085 RANBP6O60518 1105 aaKnown RBP7.1□□□□□ -1.27
TRIM38-201ENST00000357085 CCDC22O60826 627 aa7.1□□□□□ -1.27
Retrieved 100 of 20,778 RNA–protein pairs in 20.5 ms