RNA–Protein interactions for RNA: ENST00000356090.8

NCDN-201, Transcript of neurochondrin, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NCDN, Length 3,433 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NCDN-201ENST00000356090 EMILIN3Q9NT22 766 aa14.63□□□□□ -0.07
NCDN-201ENST00000356090 TAF1P21675 1872 aa14.63□□□□□ -0.07
NCDN-201ENST00000356090 DAPK3O43293 454 aa14.63□□□□□ -0.07
NCDN-201ENST00000356090 PTK2Q05397 1052 aa14.63□□□□□ -0.07
NCDN-201ENST00000356090 SLC18A3Q16572 532 aa14.63□□□□□ -0.07
NCDN-201ENST00000356090 ECM1Q16610 540 aa14.63□□□□□ -0.07
NCDN-201ENST00000356090 HGSNATQ68CP4 663 aa14.63□□□□□ -0.07
NCDN-201ENST00000356090 MARCH10Q8NA82 808 aaPredicted RBP14.63□□□□□ -0.07
NCDN-201ENST00000356090 CELF4Q9BZC1 486 aaKnown RBP14.63□□□□□ -0.07
NCDN-201ENST00000356090 ATP8A1Q9Y2Q0 1164 aa14.63□□□□□ -0.07
NCDN-201ENST00000356090 DDX60Q8IY21 1712 aaKnown RBP14.63□□□□□ -0.07
NCDN-201ENST00000356090 SLIT2O94813 1529 aa14.63□□□□□ -0.07
NCDN-201ENST00000356090 CICQ96RK0 1608 aaPredicted RBP14.63□□□□□ -0.07
NCDN-201ENST00000356090 SSU72P8A0A1W2PR75 194 aa14.63□□□□□ -0.07
NCDN-201ENST00000356090 TMEM110-MUSTN1A8MSY1 372 aa14.63□□□□□ -0.07
NCDN-201ENST00000356090 UFL1O94874 794 aa14.63□□□□□ -0.07
NCDN-201ENST00000356090 COPB2P35606 906 aa14.63□□□□□ -0.07
NCDN-201ENST00000356090 MDH1P40925 334 aaKnown RBP14.63□□□□□ -0.07
NCDN-201ENST00000356090 NAB2Q15742 525 aa14.63□□□□□ -0.07
NCDN-201ENST00000356090 MFSD14BQ5SR56 506 aa14.63□□□□□ -0.07
NCDN-201ENST00000356090 ALKBH5Q6P6C2 394 aaKnown RBP14.63□□□□□ -0.07
NCDN-201ENST00000356090 ZNF804AQ7Z570 1209 aa14.63□□□□□ -0.07
NCDN-201ENST00000356090 CCDC91Q7Z6B0 441 aa14.63□□□□□ -0.07
NCDN-201ENST00000356090 SPZ1Q9BXG8 430 aa14.63□□□□□ -0.07
NCDN-201ENST00000356090 EPN3Q9H201 632 aa14.63□□□□□ -0.07
NCDN-201ENST00000356090 CD248Q9HCU0 757 aa14.63□□□□□ -0.07
NCDN-201ENST00000356090 TIAM2Q8IVF5 1701 aa14.62□□□□□ -0.07
NCDN-201ENST00000356090 UBR2Q8IWV8 1755 aa14.62□□□□□ -0.07
NCDN-201ENST00000356090 MAP2K2P36507 400 aa14.62□□□□□ -0.07
NCDN-201ENST00000356090 PTGISQ16647 500 aa14.62□□□□□ -0.07
NCDN-201ENST00000356090 GLE1Q53GS7 698 aaKnown RBP14.62□□□□□ -0.07
NCDN-201ENST00000356090 VPS36Q86VN1 386 aa14.62□□□□□ -0.07
NCDN-201ENST00000356090 ARFGAP2Q8N6H7 521 aa14.62□□□□□ -0.07
NCDN-201ENST00000356090 CAVIN3Q969G5 261 aa14.62□□□□□ -0.07
NCDN-201ENST00000356090 ARMCX3Q9UH62 379 aaPredicted RBP14.62□□□□□ -0.07
NCDN-201ENST00000356090 BCL9LQ86UU0 1499 aa14.62□□□□□ -0.07
NCDN-201ENST00000356090 GRID2IPA4D2P6 1211 aa14.62□□□□□ -0.07
NCDN-201ENST00000356090 POTEFA5A3E0 1075 aa14.62□□□□□ -0.07
NCDN-201ENST00000356090 SFI1A8K8P3 1242 aa14.62□□□□□ -0.07
NCDN-201ENST00000356090 HGSO14964 777 aaPredicted RBP14.62□□□□□ -0.07
NCDN-201ENST00000356090 SART1O43290 800 aaKnown RBP14.62□□□□□ -0.07
NCDN-201ENST00000356090 PLA2G4BP0C869 781 aa14.62□□□□□ -0.07
NCDN-201ENST00000356090 POTEIP0CG38 1075 aa14.62□□□□□ -0.07
NCDN-201ENST00000356090 KRT13P13646 458 aa14.62□□□□□ -0.07
NCDN-201ENST00000356090 HNRNPH3P31942 346 aaKnown RBP14.62□□□□□ -0.07
NCDN-201ENST00000356090 GJB7Q6PEY0 223 aa14.62□□□□□ -0.07
NCDN-201ENST00000356090 POTEGQ6S5H5 508 aa14.62□□□□□ -0.07
NCDN-201ENST00000356090 POTEEQ6S8J3 1075 aa14.62□□□□□ -0.07
NCDN-201ENST00000356090 MYCBPAPQ8TBZ2 947 aa14.62□□□□□ -0.07
NCDN-201ENST00000356090 TAF1DQ9H5J8 278 aaPredicted RBP14.62□□□□□ -0.07
NCDN-201ENST00000356090 FBXL5Q9UKA1 691 aa14.62□□□□□ -0.07
NCDN-201ENST00000356090 HDAC9Q9UKV0 1011 aa14.62□□□□□ -0.07
NCDN-201ENST00000356090 BCS1LQ9Y276 419 aa14.62□□□□□ -0.07
NCDN-201ENST00000356090 RIMBP2O15034 1052 aa14.62□□□□□ -0.07
NCDN-201ENST00000356090 SLURP2P0DP57 97 aa14.62□□□□□ -0.07
NCDN-201ENST00000356090 ITGA4P13612 1032 aa14.62□□□□□ -0.07
NCDN-201ENST00000356090 SNAP25P60880 206 aa14.62□□□□□ -0.07
NCDN-201ENST00000356090 ERVK-9P63128 1117 aa14.62□□□□□ -0.07
NCDN-201ENST00000356090 DHX9Q08211 1270 aaKnown RBP14.62□□□□□ -0.07
NCDN-201ENST00000356090 USP38Q8NB14 1042 aa14.62□□□□□ -0.07
NCDN-201ENST00000356090 LINC00116Q8NCU8 138 aa14.62□□□□□ -0.07
NCDN-201ENST00000356090 GIMAP7Q8NHV1 300 aa14.62□□□□□ -0.07
NCDN-201ENST00000356090 WHAMMQ8TF30 809 aa14.62□□□□□ -0.07
NCDN-201ENST00000356090 HSD17B3P37058 310 aa14.61□□□□□ -0.07
NCDN-201ENST00000356090 CDC37Q16543 378 aaPredicted RBP14.61□□□□□ -0.07
NCDN-201ENST00000356090 LRRC45Q96CN5 670 aa14.61□□□□□ -0.07
NCDN-201ENST00000356090 NYXQ9GZU5 481 aa14.61□□□□□ -0.07
NCDN-201ENST00000356090 NUCKS1Q9H1E3 243 aaKnown RBP14.61□□□□□ -0.07
NCDN-201ENST00000356090 PSTPIP2Q9H939 334 aa14.61□□□□□ -0.07
NCDN-201ENST00000356090 GFPT2O94808 682 aa14.61□□□□□ -0.07
NCDN-201ENST00000356090 PLS1Q14651 629 aa14.61□□□□□ -0.07
NCDN-201ENST00000356090 EXOC3L4Q17RC7 722 aa14.61□□□□□ -0.07
NCDN-201ENST00000356090 IQCKQ8N0W5 287 aa14.61□□□□□ -0.07
NCDN-201ENST00000356090 ANKS1AQ92625 1134 aa14.61□□□□□ -0.07
NCDN-201ENST00000356090 DCCP43146 1447 aa14.61□□□□□ -0.07
NCDN-201ENST00000356090 MAGOHP61326 146 aaKnown RBP14.6□□□□□ -0.07
NCDN-201ENST00000356090 E2F5Q15329 346 aa14.6□□□□□ -0.07
NCDN-201ENST00000356090 MAGOHBQ96A72 148 aaKnown RBP14.6□□□□□ -0.07
NCDN-201ENST00000356090 MYCBPQ99417 103 aaPredicted RBP14.6□□□□□ -0.07
NCDN-201ENST00000356090 RNF14Q9UBS8 474 aa14.6□□□□□ -0.07
NCDN-201ENST00000356090 RTCBQ9Y3I0 505 aaKnown RBP14.6□□□□□ -0.07
NCDN-201ENST00000356090 NOC2LQ9Y3T9 749 aaKnown RBP14.6□□□□□ -0.07
NCDN-201ENST00000356090 HMGB1P1B2RPK0 211 aaPredicted RBP14.6□□□□□ -0.07
NCDN-201ENST00000356090 PGRMC1O00264 195 aaKnown RBP14.6□□□□□ -0.07
NCDN-201ENST00000356090 TTI1O43156 1089 aa14.6□□□□□ -0.07
NCDN-201ENST00000356090 NOL4O94818 638 aa14.6□□□□□ -0.07
NCDN-201ENST00000356090 KIF4AO95239 1232 aa14.6□□□□□ -0.07
NCDN-201ENST00000356090 XRCC5P13010 732 aaKnown RBP14.6□□□□□ -0.07
NCDN-201ENST00000356090 ITIH3Q06033 890 aa14.6□□□□□ -0.07
NCDN-201ENST00000356090 PRR16Q569H4 304 aa14.6□□□□□ -0.07
NCDN-201ENST00000356090 KDM7AQ6ZMT4 941 aa14.6□□□□□ -0.07
NCDN-201ENST00000356090 RDH13Q8NBN7 331 aa14.6□□□□□ -0.07
NCDN-201ENST00000356090 GDF3Q9NR23 364 aa14.6□□□□□ -0.07
NCDN-201ENST00000356090 PJA2O43164 708 aa14.6□□□□□ -0.07
NCDN-201ENST00000356090 GCNT3O95395 438 aa14.6□□□□□ -0.07
NCDN-201ENST00000356090 MRPL12P52815 198 aaKnown RBP14.6□□□□□ -0.07
NCDN-201ENST00000356090 ZNF211Q13398 564 aaPredicted RBP14.6□□□□□ -0.07
NCDN-201ENST00000356090 MKRN4PQ13434 485 aaPredicted RBP14.6□□□□□ -0.07
NCDN-201ENST00000356090 USH1GQ495M9 461 aa14.6□□□□□ -0.07
NCDN-201ENST00000356090 MEI1Q5TIA1 1274 aa14.6□□□□□ -0.07
Retrieved 100 of 20,778 RNA–protein pairs in 26 ms