RNA–Protein interactions for RNA: ENST00000355983.3

CCR9-201, Transcript of C-C motif chemokine receptor 9, humanhuman

TSL 1 (best) BASIC

Gene CCR9, Length 2,653 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCR9-201ENST00000355983 MARF1Q9Y4F3 1742 aaKnown RBP8.39□□□□□ -1.07
CCR9-201ENST00000355983 AFDNP55196 1824 aaKnown RBP8.39□□□□□ -1.07
CCR9-201ENST00000355983 A0A1B0GVG6 124 aa8.39□□□□□ -1.07
CCR9-201ENST00000355983 BICDL2A1A5D9 508 aa8.39□□□□□ -1.07
CCR9-201ENST00000355983 NEURL1BA8MQ27 555 aa8.39□□□□□ -1.07
CCR9-201ENST00000355983 UNC5CO95185 931 aa8.39□□□□□ -1.07
CCR9-201ENST00000355983 CHGBP05060 677 aa8.39□□□□□ -1.07
CCR9-201ENST00000355983 PRCPP42785 496 aa8.39□□□□□ -1.07
CCR9-201ENST00000355983 LSAMPQ13449 338 aa8.39□□□□□ -1.07
CCR9-201ENST00000355983 GCKRQ14397 625 aa8.39□□□□□ -1.07
CCR9-201ENST00000355983 HLTFQ14527 1009 aaKnown RBP eCLIP8.39□□□□□ -1.07
CCR9-201ENST00000355983 KPNB1Q14974 876 aaKnown RBP8.39□□□□□ -1.07
CCR9-201ENST00000355983 PPP2R5BQ15173 497 aa8.39□□□□□ -1.07
CCR9-201ENST00000355983 NAB2Q15742 525 aa8.39□□□□□ -1.07
CCR9-201ENST00000355983 PPP2R5EQ16537 467 aa8.39□□□□□ -1.07
CCR9-201ENST00000355983 TTI2Q6NXR4 508 aa8.39□□□□□ -1.07
CCR9-201ENST00000355983 TSHZ1Q6ZSZ6 1077 aa8.39□□□□□ -1.07
CCR9-201ENST00000355983 TRIM22Q8IYM9 498 aa8.39□□□□□ -1.07
CCR9-201ENST00000355983 IGDCC4Q8TDY8 1250 aa8.39□□□□□ -1.07
CCR9-201ENST00000355983 LPIN2Q92539 896 aa8.39□□□□□ -1.07
CCR9-201ENST00000355983 OSBP2Q969R2 916 aa8.39□□□□□ -1.07
CCR9-201ENST00000355983 ZNF333Q96JL9 665 aa8.39□□□□□ -1.07
CCR9-201ENST00000355983 TSPAN18Q96SJ8 248 aa8.39□□□□□ -1.07
CCR9-201ENST00000355983 TUBGCP2Q9BSJ2 902 aa8.39□□□□□ -1.07
CCR9-201ENST00000355983 INTS9Q9NV88 658 aaKnown RBP8.39□□□□□ -1.07
CCR9-201ENST00000355983 EHD2Q9NZN4 543 aa8.39□□□□□ -1.07
CCR9-201ENST00000355983 VPS54Q9P1Q0 977 aa8.39□□□□□ -1.07
CCR9-201ENST00000355983 ACEP12821 1306 aa8.38□□□□□ -1.07
CCR9-201ENST00000355983 PALM3A6NDB9 673 aaPredicted RBP8.38□□□□□ -1.07
CCR9-201ENST00000355983 SIGLEC16A6NMB1 481 aa8.38□□□□□ -1.07
CCR9-201ENST00000355983 BTBD19C9JJ37 291 aa8.38□□□□□ -1.07
CCR9-201ENST00000355983 WNT7AO00755 349 aa8.38□□□□□ -1.07
CCR9-201ENST00000355983 PSMA7O14818 248 aa8.38□□□□□ -1.07
CCR9-201ENST00000355983 MAP3K13O43283 966 aa8.38□□□□□ -1.07
CCR9-201ENST00000355983 IGKV5-2P06315 115 aa8.38□□□□□ -1.07
CCR9-201ENST00000355983 SKIP12755 728 aa8.38□□□□□ -1.07
CCR9-201ENST00000355983 CXCR5P32302 372 aa8.38□□□□□ -1.07
CCR9-201ENST00000355983 EIF4A3P38919 411 aaKnown RBP8.38□□□□□ -1.07
CCR9-201ENST00000355983 RAD23BP54727 409 aa8.38□□□□□ -1.07
CCR9-201ENST00000355983 INHBCP55103 352 aa8.38□□□□□ -1.07
CCR9-201ENST00000355983 POLE2P56282 527 aa8.38□□□□□ -1.07
CCR9-201ENST00000355983 SULT2A1Q06520 285 aa8.38□□□□□ -1.07
CCR9-201ENST00000355983 DZIP3Q86Y13 1208 aaKnown RBP8.38□□□□□ -1.07
CCR9-201ENST00000355983 RAB11FIP4Q86YS3 637 aa8.38□□□□□ -1.07
CCR9-201ENST00000355983 STAG2Q8N3U4 1231 aa8.38□□□□□ -1.07
CCR9-201ENST00000355983 UBLCP1Q8WVY7 318 aaPredicted RBP8.38□□□□□ -1.07
CCR9-201ENST00000355983 MTMR8Q96EF0 704 aa8.38□□□□□ -1.07
CCR9-201ENST00000355983 EPSTI1Q96J88 318 aa8.38□□□□□ -1.07
CCR9-201ENST00000355983 AGAP3Q96P47 875 aa8.38□□□□□ -1.07
CCR9-201ENST00000355983 DCLRE1BQ9H816 532 aa8.38□□□□□ -1.07
CCR9-201ENST00000355983 GALNT8Q9NY28 637 aa8.38□□□□□ -1.07
CCR9-201ENST00000355983 SMARCAL1Q9NZC9 954 aa8.38□□□□□ -1.07
CCR9-201ENST00000355983 DLGAP2Q9P1A6 1054 aa8.38□□□□□ -1.07
CCR9-201ENST00000355983 TBC1D30Q9Y2I9 924 aa8.38□□□□□ -1.07
CCR9-201ENST00000355983 TMEM221A6NGB7 291 aa8.38□□□□□ -1.07
CCR9-201ENST00000355983 TRAFD1O14545 582 aaPredicted RBP8.38□□□□□ -1.07
CCR9-201ENST00000355983 HNRNPCL1O60812 293 aaKnown RBP8.38□□□□□ -1.07
CCR9-201ENST00000355983 VHLP40337 213 aa8.38□□□□□ -1.07
CCR9-201ENST00000355983 NEXNQ0ZGT2 675 aa8.38□□□□□ -1.07
CCR9-201ENST00000355983 SLC4A8Q2Y0W8 1093 aa8.38□□□□□ -1.07
CCR9-201ENST00000355983 Q4G0T1 1027 aa8.38□□□□□ -1.07
CCR9-201ENST00000355983 FKBP15Q5T1M5 1219 aa8.38□□□□□ -1.07
CCR9-201ENST00000355983 MFSD5Q6N075 450 aa8.38□□□□□ -1.07
CCR9-201ENST00000355983 FOXR2Q6PJQ5 311 aa8.38□□□□□ -1.07
CCR9-201ENST00000355983 CCDC84Q86UT8 332 aaPredicted RBP8.38□□□□□ -1.07
CCR9-201ENST00000355983 SMYD1Q8NB12 490 aa8.38□□□□□ -1.07
CCR9-201ENST00000355983 OR2W6PQ8NHA6 318 aa8.38□□□□□ -1.07
CCR9-201ENST00000355983 APPBP2Q92624 585 aa8.38□□□□□ -1.07
CCR9-201ENST00000355983 GATA6Q92908 595 aa8.38□□□□□ -1.07
CCR9-201ENST00000355983 PHKBQ93100 1093 aa8.38□□□□□ -1.07
CCR9-201ENST00000355983 PPP2R3CQ969Q6 453 aa8.38□□□□□ -1.07
CCR9-201ENST00000355983 MS4A14Q96JA4 679 aa8.38□□□□□ -1.07
CCR9-201ENST00000355983 MAF1Q9H063 256 aa8.38□□□□□ -1.07
CCR9-201ENST00000355983 LY9Q9HBG7 655 aa8.38□□□□□ -1.07
CCR9-201ENST00000355983 STOML1Q9UBI4 398 aa8.38□□□□□ -1.07
CCR9-201ENST00000355983 PHF8Q9UPP1 1060 aa8.38□□□□□ -1.07
CCR9-201ENST00000355983 USP20Q9Y2K6 914 aa8.38□□□□□ -1.07
CCR9-201ENST00000355983 ATAD5Q96QE3 1844 aa8.38□□□□□ -1.07
CCR9-201ENST00000355983 NCK2O43639 380 aa8.37□□□□□ -1.07
CCR9-201ENST00000355983 AKR1B10O60218 316 aa8.37□□□□□ -1.07
CCR9-201ENST00000355983 RHOBTB3O94955 611 aa8.37□□□□□ -1.07
CCR9-201ENST00000355983 ECEL1O95672 775 aa8.37□□□□□ -1.07
CCR9-201ENST00000355983 GSTT1P30711 240 aa8.37□□□□□ -1.07
CCR9-201ENST00000355983 RFC5P40937 340 aa8.37□□□□□ -1.07
CCR9-201ENST00000355983 DRG2P55039 364 aaKnown RBP8.37□□□□□ -1.07
CCR9-201ENST00000355983 ATP2C1P98194 919 aaPredicted RBP8.37□□□□□ -1.07
CCR9-201ENST00000355983 FAM69CQ0P6D2 419 aa8.37□□□□□ -1.07
CCR9-201ENST00000355983 USH1GQ495M9 461 aa8.37□□□□□ -1.07
CCR9-201ENST00000355983 C10orf76Q5T2E6 689 aa8.37□□□□□ -1.07
CCR9-201ENST00000355983 FOXB2Q5VYV0 432 aa8.37□□□□□ -1.07
CCR9-201ENST00000355983 TRIM68Q6AZZ1 485 aa8.37□□□□□ -1.07
CCR9-201ENST00000355983 UNC13DQ70J99 1090 aa8.37□□□□□ -1.07
CCR9-201ENST00000355983 TAOK1Q7L7X3 1001 aa8.37□□□□□ -1.07
CCR9-201ENST00000355983 KRT26Q7Z3Y9 468 aa8.37□□□□□ -1.07
CCR9-201ENST00000355983 SMC1BQ8NDV3 1235 aa8.37□□□□□ -1.07
CCR9-201ENST00000355983 MAML3Q96JK9 1138 aa8.37□□□□□ -1.07
CCR9-201ENST00000355983 SMC6Q96SB8 1091 aa8.37□□□□□ -1.07
CCR9-201ENST00000355983 SLC26A6Q9BXS9 759 aa8.37□□□□□ -1.07
CCR9-201ENST00000355983 RANBP17Q9H2T7 1088 aaKnown RBP8.37□□□□□ -1.07
CCR9-201ENST00000355983 TLE6Q9H808 572 aa8.37□□□□□ -1.07
Retrieved 100 of 20,778 RNA–protein pairs in 15.6 ms