RNA–Protein interactions for RNA: ENST00000355238.10

SYNCRIP-201, Transcript of synaptotagmin binding cytoplasmic RNA interacting protein, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene SYNCRIP, Length 6,449 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNCRIP-201ENST00000355238 CORO7P57737 925 aa13.7□□□□□ -0.22
SYNCRIP-201ENST00000355238 NLRX1Q86UT6 975 aa13.7□□□□□ -0.22
SYNCRIP-201ENST00000355238 HESX1Q9UBX0 185 aa13.7□□□□□ -0.22
SYNCRIP-201ENST00000355238 MYOM2P54296 1465 aa13.7□□□□□ -0.22
SYNCRIP-201ENST00000355238 PIK3CAP42336 1068 aa13.69□□□□□ -0.22
SYNCRIP-201ENST00000355238 NEK2P51955 445 aa13.69□□□□□ -0.22
SYNCRIP-201ENST00000355238 YARSP54577 528 aaKnown RBP13.69□□□□□ -0.22
SYNCRIP-201ENST00000355238 BASP1P80723 227 aaKnown RBP13.69□□□□□ -0.22
SYNCRIP-201ENST00000355238 KLC1Q07866 573 aa13.69□□□□□ -0.22
SYNCRIP-201ENST00000355238 DHX40Q8IX18 779 aaKnown RBP13.69□□□□□ -0.22
SYNCRIP-201ENST00000355238 TGS1Q96RS0 853 aaKnown RBP13.69□□□□□ -0.22
SYNCRIP-201ENST00000355238 EPC1Q9H2F5 836 aa13.69□□□□□ -0.22
SYNCRIP-201ENST00000355238 GCC2Q8IWJ2 1684 aa13.69□□□□□ -0.22
SYNCRIP-201ENST00000355238 RIMBP2O15034 1052 aa13.69□□□□□ -0.22
SYNCRIP-201ENST00000355238 SRGAP2BP0DMP2 458 aa13.69□□□□□ -0.22
SYNCRIP-201ENST00000355238 VSNL1P62760 191 aa13.69□□□□□ -0.22
SYNCRIP-201ENST00000355238 TMPRSS15P98073 1019 aa13.69□□□□□ -0.22
SYNCRIP-201ENST00000355238 DMP1Q13316 513 aaPredicted RBP13.69□□□□□ -0.22
SYNCRIP-201ENST00000355238 FMR1NBQ8N0W7 255 aaPredicted RBP13.69□□□□□ -0.22
SYNCRIP-201ENST00000355238 USP6NLQ92738 828 aa13.69□□□□□ -0.22
SYNCRIP-201ENST00000355238 SCHIP1Q9P0W5 487 aaPredicted RBP13.69□□□□□ -0.22
SYNCRIP-201ENST00000355238 SNX24Q9Y343 169 aa13.69□□□□□ -0.22
SYNCRIP-201ENST00000355238 NUP153P49790 1475 aaKnown RBP13.69□□□□□ -0.22
SYNCRIP-201ENST00000355238 GSTA4O15217 222 aa13.69□□□□□ -0.22
SYNCRIP-201ENST00000355238 ODR4Q5SWX8 454 aa13.69□□□□□ -0.22
SYNCRIP-201ENST00000355238 RGS9BPQ6ZS82 235 aa13.69□□□□□ -0.22
SYNCRIP-201ENST00000355238 TEKT3Q9BXF9 490 aa13.69□□□□□ -0.22
SYNCRIP-201ENST00000355238 CEP72Q9P209 647 aa13.69□□□□□ -0.22
SYNCRIP-201ENST00000355238 ADAMTS1Q9UHI8 967 aa13.69□□□□□ -0.22
SYNCRIP-201ENST00000355238 RTCBQ9Y3I0 505 aaKnown RBP13.69□□□□□ -0.22
SYNCRIP-201ENST00000355238 SH2B2O14492 632 aaPredicted RBP13.69□□□□□ -0.22
SYNCRIP-201ENST00000355238 ARHGEF9O43307 516 aa13.69□□□□□ -0.22
SYNCRIP-201ENST00000355238 FOSP01100 380 aaPredicted RBP13.69□□□□□ -0.22
SYNCRIP-201ENST00000355238 CASP2P42575 452 aa13.69□□□□□ -0.22
SYNCRIP-201ENST00000355238 KRT26Q7Z3Y9 468 aa13.69□□□□□ -0.22
SYNCRIP-201ENST00000355238 ZNF711Q9Y462 761 aa13.69□□□□□ -0.22
SYNCRIP-201ENST00000355238 APLFQ8IW19 511 aaPredicted RBP13.69□□□□□ -0.22
SYNCRIP-201ENST00000355238 GEMIN8Q9NWZ8 242 aaKnown RBP13.69□□□□□ -0.22
SYNCRIP-201ENST00000355238 DBNLQ9UJU6 430 aaKnown RBP13.69□□□□□ -0.22
SYNCRIP-201ENST00000355238 CAPN11Q9UMQ6 739 aa13.69□□□□□ -0.22
SYNCRIP-201ENST00000355238 COPEO14579 308 aa13.68□□□□□ -0.22
SYNCRIP-201ENST00000355238 PSMD7P51665 324 aa13.68□□□□□ -0.22
SYNCRIP-201ENST00000355238 MRPS25P82663 173 aaKnown RBP13.68□□□□□ -0.22
SYNCRIP-201ENST00000355238 PCGF5Q86SE9 256 aa13.68□□□□□ -0.22
SYNCRIP-201ENST00000355238 KCNF1Q9H3M0 494 aa13.68□□□□□ -0.22
SYNCRIP-201ENST00000355238 USP40Q9NVE5 1235 aa13.68□□□□□ -0.22
SYNCRIP-201ENST00000355238 FAM187AA6NFU0 413 aa13.68□□□□□ -0.22
SYNCRIP-201ENST00000355238 TRIP13Q15645 432 aaPredicted RBP13.68□□□□□ -0.22
SYNCRIP-201ENST00000355238 TRMT10CQ7L0Y3 403 aaKnown RBP13.68□□□□□ -0.22
SYNCRIP-201ENST00000355238 SLITRK6Q9H5Y7 841 aa13.68□□□□□ -0.22
SYNCRIP-201ENST00000355238 ZBED4O75132 1171 aa13.68□□□□□ -0.22
SYNCRIP-201ENST00000355238 CCND1P24385 295 aa13.68□□□□□ -0.22
SYNCRIP-201ENST00000355238 LRRC41Q15345 812 aa13.68□□□□□ -0.22
SYNCRIP-201ENST00000355238 KRT39Q6A163 491 aa13.68□□□□□ -0.22
SYNCRIP-201ENST00000355238 HIPK4Q8NE63 616 aa13.68□□□□□ -0.22
SYNCRIP-201ENST00000355238 GGA1Q9UJY5 639 aa13.68□□□□□ -0.22
SYNCRIP-201ENST00000355238 PCDHB4Q9Y5E5 795 aa13.68□□□□□ -0.22
SYNCRIP-201ENST00000355238 PALM3A6NDB9 673 aaPredicted RBP13.68□□□□□ -0.22
SYNCRIP-201ENST00000355238 BBS9Q3SYG4 887 aa13.68□□□□□ -0.22
SYNCRIP-201ENST00000355238 MAST1Q9Y2H9 1570 aa13.68□□□□□ -0.22
SYNCRIP-201ENST00000355238 CIAO1O76071 339 aa13.68□□□□□ -0.22
SYNCRIP-201ENST00000355238 CTSWP56202 376 aa13.68□□□□□ -0.22
SYNCRIP-201ENST00000355238 GUCY1A3Q02108 690 aa13.68□□□□□ -0.22
SYNCRIP-201ENST00000355238 CDC37Q16543 378 aaPredicted RBP13.68□□□□□ -0.22
SYNCRIP-201ENST00000355238 NBPF20Q3BBV1 942 aa13.68□□□□□ -0.22
SYNCRIP-201ENST00000355238 NUDCD3Q8IVD9 361 aa13.68□□□□□ -0.22
SYNCRIP-201ENST00000355238 CATSPER1Q8NEC5 780 aa13.68□□□□□ -0.22
SYNCRIP-201ENST00000355238 GIPC2Q8TF65 315 aa13.68□□□□□ -0.22
SYNCRIP-201ENST00000355238 TBC1D22AQ8WUA7 517 aa13.68□□□□□ -0.22
SYNCRIP-201ENST00000355238 ACSBG1Q96GR2 724 aa13.68□□□□□ -0.22
SYNCRIP-201ENST00000355238 FAM161BQ96MY7 647 aa13.68□□□□□ -0.22
SYNCRIP-201ENST00000355238 PCDHB6Q9Y5E3 794 aa13.68□□□□□ -0.22
SYNCRIP-201ENST00000355238 hCG_1984214I3L0E3 225 aa13.67□□□□□ -0.22
SYNCRIP-201ENST00000355238 LRRN2O75325 713 aa13.67□□□□□ -0.22
SYNCRIP-201ENST00000355238 HDAC4P56524 1084 aa13.67□□□□□ -0.22
SYNCRIP-201ENST00000355238 XKR9Q5GH70 373 aa13.67□□□□□ -0.22
SYNCRIP-201ENST00000355238 ZBTB8OSQ8IWT0 167 aa13.67□□□□□ -0.22
SYNCRIP-201ENST00000355238 ZNF713Q8N859 430 aaPredicted RBP13.67□□□□□ -0.22
SYNCRIP-201ENST00000355238 TTC17Q96AE7 1141 aa13.67□□□□□ -0.22
SYNCRIP-201ENST00000355238 ATP10BO94823 1461 aa13.67□□□□□ -0.22
SYNCRIP-201ENST00000355238 ADGRL2O95490 1459 aa13.67□□□□□ -0.22
SYNCRIP-201ENST00000355238 BRAFP15056 766 aa13.67□□□□□ -0.22
SYNCRIP-201ENST00000355238 KCNA4P22459 653 aa13.67□□□□□ -0.22
SYNCRIP-201ENST00000355238 NR5A1Q13285 461 aa13.67□□□□□ -0.22
SYNCRIP-201ENST00000355238 CHURC1Q8WUH1 139 aa13.67□□□□□ -0.22
SYNCRIP-201ENST00000355238 CCT8L2Q96SF2 557 aa13.67□□□□□ -0.22
SYNCRIP-201ENST00000355238 WARS2Q9UGM6 360 aaKnown RBP13.67□□□□□ -0.22
SYNCRIP-201ENST00000355238 ZNF518AQ6AHZ1 1483 aa13.67□□□□□ -0.22
SYNCRIP-201ENST00000355238 ARFIP2P53365 341 aa13.67□□□□□ -0.22
SYNCRIP-201ENST00000355238 TCIRG1Q13488 830 aa13.67□□□□□ -0.22
SYNCRIP-201ENST00000355238 KLHL38Q2WGJ6 581 aa13.67□□□□□ -0.22
SYNCRIP-201ENST00000355238 LRIG3Q6UXM1 1119 aa13.67□□□□□ -0.22
SYNCRIP-201ENST00000355238 SDR42E1Q8WUS8 393 aa13.67□□□□□ -0.22
SYNCRIP-201ENST00000355238 POMGNT1Q8WZA1 660 aa13.67□□□□□ -0.22
SYNCRIP-201ENST00000355238 SAYSD1Q9NPB0 183 aa13.67□□□□□ -0.22
SYNCRIP-201ENST00000355238 EMILIN3Q9NT22 766 aa13.67□□□□□ -0.22
SYNCRIP-201ENST00000355238 TRAF3IP3Q9Y228 551 aa13.67□□□□□ -0.22
SYNCRIP-201ENST00000355238 ARL2BPQ9Y2Y0 163 aa13.67□□□□□ -0.22
SYNCRIP-201ENST00000355238 ENO4A6NNW6 628 aa13.67□□□□□ -0.22
SYNCRIP-201ENST00000355238 CAPN9O14815 690 aa13.67□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 54.7 ms