RNA–Protein interactions for RNA: ENST00000355155.5

VPS13B-201, Transcript of vacuolar protein sorting 13 homolog B, humanhuman

TSL 1 (best) BASIC

Gene VPS13B, Length 2,822 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13B-201ENST00000355155 NOLC1Q14978 699 aaKnown RBP eCLIP19.17■□□□□ 0.66
VPS13B-201ENST00000355155 FILIP1LQ4L180 1135 aa19.17■□□□□ 0.66
VPS13B-201ENST00000355155 SNRNP48Q6IEG0 339 aaKnown RBP19.17■□□□□ 0.66
VPS13B-201ENST00000355155 GPBP1Q86WP2 473 aa19.17■□□□□ 0.66
VPS13B-201ENST00000355155 INPP4AQ96PE3 977 aaPredicted RBP19.17■□□□□ 0.66
VPS13B-201ENST00000355155 CYP39A1Q9NYL5 469 aa19.17■□□□□ 0.66
VPS13B-201ENST00000355155 NFASCO94856 1347 aa19.17■□□□□ 0.66
VPS13B-201ENST00000355155 COPB2P35606 906 aa19.16■□□□□ 0.66
VPS13B-201ENST00000355155 ANKRD40Q6AI12 368 aa19.16■□□□□ 0.66
VPS13B-201ENST00000355155 ZNF507Q8TCN5 953 aa19.16■□□□□ 0.66
VPS13B-201ENST00000355155 IWS1Q96ST2 819 aa19.16■□□□□ 0.66
VPS13B-201ENST00000355155 KIF20AO95235 890 aa19.16■□□□□ 0.66
VPS13B-201ENST00000355155 CCND2P30279 289 aa19.16■□□□□ 0.66
VPS13B-201ENST00000355155 ARID5BQ14865 1188 aa19.16■□□□□ 0.66
VPS13B-201ENST00000355155 ANKRD20A12PQ8NF67 263 aa19.16■□□□□ 0.66
VPS13B-201ENST00000355155 DNERQ8NFT8 737 aa19.16■□□□□ 0.66
VPS13B-201ENST00000355155 FBXO40Q9UH90 709 aa19.16■□□□□ 0.66
VPS13B-201ENST00000355155 DBR1Q9UK59 544 aaKnown RBP19.16■□□□□ 0.66
VPS13B-201ENST00000355155 ZNF131P52739 623 aa19.15■□□□□ 0.66
VPS13B-201ENST00000355155 LRMPQ12912 555 aa19.15■□□□□ 0.66
VPS13B-201ENST00000355155 FAM26FQ5R3K3 315 aa19.15■□□□□ 0.66
VPS13B-201ENST00000355155 NACC1Q96RE7 527 aa19.15■□□□□ 0.66
VPS13B-201ENST00000355155 OLFML3Q9NRN5 406 aa19.15■□□□□ 0.66
VPS13B-201ENST00000355155 FGFR1OPO95684 399 aaKnown RBP19.15■□□□□ 0.66
VPS13B-201ENST00000355155 GAP43P17677 238 aa19.15■□□□□ 0.66
VPS13B-201ENST00000355155 MARSP56192 900 aaKnown RBP19.15■□□□□ 0.66
VPS13B-201ENST00000355155 PSMC6P62333 389 aa19.15■□□□□ 0.66
VPS13B-201ENST00000355155 ITGB3BPQ13352 177 aaPredicted RBP19.15■□□□□ 0.66
VPS13B-201ENST00000355155 BAATQ14032 418 aaPredicted RBP19.15■□□□□ 0.66
VPS13B-201ENST00000355155 TRIM14Q14142 442 aa19.15■□□□□ 0.66
VPS13B-201ENST00000355155 TPD52L1Q16890 204 aaPredicted RBP19.15■□□□□ 0.66
VPS13B-201ENST00000355155 PPP4R3CPQ6ZMV5 832 aa19.15■□□□□ 0.66
VPS13B-201ENST00000355155 C1orf186Q6ZWK4 172 aa19.15■□□□□ 0.66
VPS13B-201ENST00000355155 RMDN3Q96TC7 470 aa19.15■□□□□ 0.66
VPS13B-201ENST00000355155 AGTPBP1Q9UPW5 1226 aa19.15■□□□□ 0.66
VPS13B-201ENST00000355155 NFIL3Q16649 462 aa19.15■□□□□ 0.66
VPS13B-201ENST00000355155 DYDC2Q96IM9 177 aa19.15■□□□□ 0.66
VPS13B-201ENST00000355155 PFASO15067 1338 aa19.14■□□□□ 0.66
VPS13B-201ENST00000355155 UBE4BO95155 1302 aa19.14■□□□□ 0.66
VPS13B-201ENST00000355155 TRIM49BA6NDI0 452 aa19.14■□□□□ 0.65
VPS13B-201ENST00000355155 LGALS16A8MUM7 142 aa19.14■□□□□ 0.65
VPS13B-201ENST00000355155 GUCY2CP25092 1073 aa19.14■□□□□ 0.65
VPS13B-201ENST00000355155 ICAM3P32942 547 aa19.14■□□□□ 0.65
VPS13B-201ENST00000355155 TREML2Q5T2D2 321 aa19.14■□□□□ 0.65
VPS13B-201ENST00000355155 DYMQ7RTS9 669 aa19.14■□□□□ 0.65
VPS13B-201ENST00000355155 FILIP1Q7Z7B0 1213 aa19.14■□□□□ 0.65
VPS13B-201ENST00000355155 TMEM139Q8IV31 216 aa19.14■□□□□ 0.65
VPS13B-201ENST00000355155 NSUN6Q8TEA1 469 aaKnown RBP19.14■□□□□ 0.65
VPS13B-201ENST00000355155 SEL1LQ9UBV2 794 aa19.14■□□□□ 0.65
VPS13B-201ENST00000355155 SFPQP23246 707 aaKnown RBP eCLIP19.14■□□□□ 0.65
VPS13B-201ENST00000355155 SFNP31947 248 aa19.14■□□□□ 0.65
VPS13B-201ENST00000355155 MTMR1Q13613 665 aa19.14■□□□□ 0.65
VPS13B-201ENST00000355155 ARMC9Q7Z3E5 817 aa19.14■□□□□ 0.65
VPS13B-201ENST00000355155 MYOCDQ8IZQ8 938 aa19.14■□□□□ 0.65
VPS13B-201ENST00000355155 TMEM174Q8WUU8 243 aa19.14■□□□□ 0.65
VPS13B-201ENST00000355155 CCDC51Q96ER9 411 aa19.14■□□□□ 0.65
VPS13B-201ENST00000355155 CEP63Q96MT8 703 aa19.14■□□□□ 0.65
VPS13B-201ENST00000355155 PANX2Q96RD6 677 aa19.14■□□□□ 0.65
VPS13B-201ENST00000355155 KCTD10Q9H3F6 313 aa19.14■□□□□ 0.65
VPS13B-201ENST00000355155 A1CFQ9NQ94 594 aaKnown RBP19.14■□□□□ 0.65
VPS13B-201ENST00000355155 ODF2LQ9ULJ1 636 aa19.14■□□□□ 0.65
VPS13B-201ENST00000355155 SLC45A1Q9Y2W3 748 aa19.14■□□□□ 0.65
VPS13B-201ENST00000355155 ARID2Q68CP9 1835 aa19.14■□□□□ 0.65
VPS13B-201ENST00000355155 KIAA1217Q5T5P2 1943 aa19.13■□□□□ 0.65
VPS13B-201ENST00000355155 CNMDO75829 334 aa19.13■□□□□ 0.65
VPS13B-201ENST00000355155 JAK3P52333 1124 aa19.13■□□□□ 0.65
VPS13B-201ENST00000355155 RINT1Q6NUQ1 792 aa19.13■□□□□ 0.65
VPS13B-201ENST00000355155 PDZRN4Q6ZMN7 1036 aaPredicted RBP19.13■□□□□ 0.65
VPS13B-201ENST00000355155 LRRC55Q6ZSA7 311 aa19.13■□□□□ 0.65
VPS13B-201ENST00000355155 TRIM47Q96LD4 638 aa19.13■□□□□ 0.65
VPS13B-201ENST00000355155 SLC39A2Q9NP94 309 aa19.13■□□□□ 0.65
VPS13B-201ENST00000355155 LOC102724159A0A0B4J2E5 919 aa19.13■□□□□ 0.65
VPS13B-201ENST00000355155 P4HBP07237 508 aaKnown RBP19.13■□□□□ 0.65
VPS13B-201ENST00000355155 TERF1P54274 439 aa19.13■□□□□ 0.65
VPS13B-201ENST00000355155 UBXN2AP68543 259 aa19.13■□□□□ 0.65
VPS13B-201ENST00000355155 PWP2Q15269 919 aaKnown RBP19.13■□□□□ 0.65
VPS13B-201ENST00000355155 EDRF1Q3B7T1 1238 aa19.13■□□□□ 0.65
VPS13B-201ENST00000355155 ARHGEF16Q5VV41 709 aa19.13■□□□□ 0.65
VPS13B-201ENST00000355155 ZNF746Q6NUN9 644 aaPredicted RBP19.13■□□□□ 0.65
VPS13B-201ENST00000355155 GTF3C2Q8WUA4 911 aaPredicted RBP19.13■□□□□ 0.65
VPS13B-201ENST00000355155 IQCDQ96DY2 449 aa19.13■□□□□ 0.65
VPS13B-201ENST00000355155 CDHR1Q96JP9 859 aa19.13■□□□□ 0.65
VPS13B-201ENST00000355155 TIPINQ9BVW5 301 aa19.13■□□□□ 0.65
VPS13B-201ENST00000355155 SRRTQ9BXP5 876 aaKnown RBP19.13■□□□□ 0.65
VPS13B-201ENST00000355155 EDNRBP24530 442 aa19.12■□□□□ 0.65
VPS13B-201ENST00000355155 FKBP1BP68106 108 aa19.12■□□□□ 0.65
VPS13B-201ENST00000355155 KRT76Q01546 638 aa19.12■□□□□ 0.65
VPS13B-201ENST00000355155 NLRX1Q86UT6 975 aa19.12■□□□□ 0.65
VPS13B-201ENST00000355155 CSGALNACT2Q8N6G5 542 aa19.12■□□□□ 0.65
VPS13B-201ENST00000355155 TC2NQ8N9U0 490 aa19.12■□□□□ 0.65
VPS13B-201ENST00000355155 EIF3DO15371 548 aaKnown RBP eCLIP19.12■□□□□ 0.653e-6■■□□□ 13.7
VPS13B-201ENST00000355155 TEX33O43247 280 aa19.12■□□□□ 0.65
VPS13B-201ENST00000355155 NR3C2P08235 984 aa19.12■□□□□ 0.65
VPS13B-201ENST00000355155 MAPTP10636 758 aaKnown RBP19.12■□□□□ 0.65
VPS13B-201ENST00000355155 SKILP12757 684 aa19.12■□□□□ 0.65
VPS13B-201ENST00000355155 FASTKD5Q7L8L6 764 aaKnown RBP19.12■□□□□ 0.65
VPS13B-201ENST00000355155 REEP2Q9BRK0 252 aa19.12■□□□□ 0.65
VPS13B-201ENST00000355155 RGL1Q9NZL6 768 aa19.12■□□□□ 0.65
VPS13B-201ENST00000355155 TRAF3IP3Q9Y228 551 aa19.12■□□□□ 0.65
VPS13B-201ENST00000355155 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP19.12■□□□□ 0.658e-7■□□□□ 8.7
Retrieved 100 of 20,778 RNA–protein pairs in 24 ms