RNA–Protein interactions for RNA: ENST00000354822.6

NKX2-1-201, Transcript of NK2 homeobox 1, humanhuman

TSL 1 (best) BASIC

Gene NKX2-1, Length 2,191 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NKX2-1-201ENST00000354822 P2RX7Q99572 595 aaKnown RBP24.59■■□□□ 1.53
NKX2-1-201ENST00000354822 ST7Q9NRC1 585 aa24.59■■□□□ 1.53
NKX2-1-201ENST00000354822 UTP18Q9Y5J1 556 aaKnown RBP eCLIP24.59■■□□□ 1.53
NKX2-1-201ENST00000354822 PSME4Q14997 1843 aa24.59■■□□□ 1.53
NKX2-1-201ENST00000354822 TFRCP02786 760 aaKnown RBP24.59■■□□□ 1.53
NKX2-1-201ENST00000354822 PRMT6Q96LA8 375 aaPredicted RBP24.59■■□□□ 1.53
NKX2-1-201ENST00000354822 MACROD2A1Z1Q3 448 aa24.58■■□□□ 1.53
NKX2-1-201ENST00000354822 POTEFA5A3E0 1075 aa24.58■■□□□ 1.53
NKX2-1-201ENST00000354822 YDJCA8MPS7 323 aa24.58■■□□□ 1.53
NKX2-1-201ENST00000354822 CETN3O15182 167 aa24.58■■□□□ 1.53
NKX2-1-201ENST00000354822 POTEIP0CG38 1075 aa24.58■■□□□ 1.53
NKX2-1-201ENST00000354822 PRLRP16471 622 aa24.58■■□□□ 1.53
NKX2-1-201ENST00000354822 ADAM9Q13443 819 aa24.58■■□□□ 1.53
NKX2-1-201ENST00000354822 IQCEQ6IPM2 695 aa24.58■■□□□ 1.53
NKX2-1-201ENST00000354822 POTEGQ6S5H5 508 aa24.58■■□□□ 1.53
NKX2-1-201ENST00000354822 POTEEQ6S8J3 1075 aa24.58■■□□□ 1.53
NKX2-1-201ENST00000354822 NOA1Q8NC60 698 aaKnown RBP24.58■■□□□ 1.53
NKX2-1-201ENST00000354822 SH2D4AQ9H788 454 aa24.58■■□□□ 1.53
NKX2-1-201ENST00000354822 TMOD2Q9NZR1 351 aa24.58■■□□□ 1.53
NKX2-1-201ENST00000354822 L1RE1Q9UN81 338 aa24.58■■□□□ 1.53
NKX2-1-201ENST00000354822 DUSP10Q9Y6W6 482 aa24.58■■□□□ 1.53
NKX2-1-201ENST00000354822 NPHP3-ACAD11A0A0J9YXS1 232 aa24.57■■□□□ 1.52
NKX2-1-201ENST00000354822 FAM86B1E9PN63 330 aa24.57■■□□□ 1.52
NKX2-1-201ENST00000354822 PJA2O43164 708 aa24.57■■□□□ 1.52
NKX2-1-201ENST00000354822 FAM86B2P0C5J1 330 aa24.57■■□□□ 1.52
NKX2-1-201ENST00000354822 SPATA31C1P0DKV0 1188 aa24.57■■□□□ 1.52
NKX2-1-201ENST00000354822 KRT26Q7Z3Y9 468 aa24.57■■□□□ 1.52
NKX2-1-201ENST00000354822 NELFCDQ8IXH7 590 aa24.57■■□□□ 1.52
NKX2-1-201ENST00000354822 ARHGEF10LQ9HCE6 1279 aa24.57■■□□□ 1.52
NKX2-1-201ENST00000354822 USP14P54578 494 aa24.57■■□□□ 1.52
NKX2-1-201ENST00000354822 SNAP25P60880 206 aa24.57■■□□□ 1.52
NKX2-1-201ENST00000354822 GIT2Q14161 759 aa24.57■■□□□ 1.52
NKX2-1-201ENST00000354822 SLC9C1Q4G0N8 1177 aa24.57■■□□□ 1.52
NKX2-1-201ENST00000354822 UIMC1Q96RL1 719 aa24.57■■□□□ 1.52
NKX2-1-201ENST00000354822 POLR3CQ9BUI4 534 aaPredicted RBP24.57■■□□□ 1.52
NKX2-1-201ENST00000354822 FGFBP2Q9BYJ0 223 aa24.57■■□□□ 1.52
NKX2-1-201ENST00000354822 ABCB6Q9NP58 842 aa24.57■■□□□ 1.52
NKX2-1-201ENST00000354822 PRR12Q9ULL5 1215 aa24.57■■□□□ 1.52
NKX2-1-201ENST00000354822 ZNF76P36508 570 aa24.56■■□□□ 1.52
NKX2-1-201ENST00000354822 MAGEA1P43355 309 aa24.56■■□□□ 1.52
NKX2-1-201ENST00000354822 ASTE1Q2TB18 679 aaPredicted RBP24.56■■□□□ 1.52
NKX2-1-201ENST00000354822 TTLL6Q8N841 843 aa24.56■■□□□ 1.52
NKX2-1-201ENST00000354822 MMS19Q96T76 1030 aa24.56■■□□□ 1.52
NKX2-1-201ENST00000354822 XPO5Q9HAV4 1204 aaKnown RBP eCLIP24.56■■□□□ 1.52
NKX2-1-201ENST00000354822 TRAF3IP3Q9Y228 551 aa24.56■■□□□ 1.52
NKX2-1-201ENST00000354822 TARSL2A2RTX5 802 aaKnown RBP24.56■■□□□ 1.52
NKX2-1-201ENST00000354822 VSNL1P62760 191 aa24.56■■□□□ 1.52
NKX2-1-201ENST00000354822 FAM83BQ5T0W9 1011 aa24.56■■□□□ 1.52
NKX2-1-201ENST00000354822 SFMBT2Q5VUG0 894 aa24.56■■□□□ 1.52
NKX2-1-201ENST00000354822 SMCR8Q8TEV9 937 aaPredicted RBP24.56■■□□□ 1.52
NKX2-1-201ENST00000354822 ALS2CR12Q96Q35 445 aa24.56■■□□□ 1.52
NKX2-1-201ENST00000354822 ZHX3Q9H4I2 956 aa24.56■■□□□ 1.52
NKX2-1-201ENST00000354822 LUC7LQ9NQ29 371 aaKnown RBP24.56■■□□□ 1.52
NKX2-1-201ENST00000354822 JADE2Q9NQC1 790 aa24.56■■□□□ 1.52
NKX2-1-201ENST00000354822 MSH4O15457 936 aa24.55■■□□□ 1.52
NKX2-1-201ENST00000354822 EIF3JO75822 258 aaKnown RBP24.55■■□□□ 1.52
NKX2-1-201ENST00000354822 SERPING1P05155 500 aa24.55■■□□□ 1.52
NKX2-1-201ENST00000354822 STAT2P52630 851 aa24.55■■□□□ 1.52
NKX2-1-201ENST00000354822 JAG1P78504 1218 aa24.55■■□□□ 1.52
NKX2-1-201ENST00000354822 RTKN2Q8IZC4 609 aa24.55■■□□□ 1.52
NKX2-1-201ENST00000354822 RNF10Q8N5U6 811 aaKnown RBP24.55■■□□□ 1.52
NKX2-1-201ENST00000354822 A0A1W2PRG0 241 aa24.54■■□□□ 1.52
NKX2-1-201ENST00000354822 RBAK-RBAKDNI3L0D1 243 aa24.54■■□□□ 1.52
NKX2-1-201ENST00000354822 OAS2P29728 719 aaKnown RBP24.54■■□□□ 1.52
NKX2-1-201ENST00000354822 CACNB1Q02641 598 aaPredicted RBP24.54■■□□□ 1.52
NKX2-1-201ENST00000354822 OPLAHO14841 1288 aa24.54■■□□□ 1.52
NKX2-1-201ENST00000354822 SRGAP2O75044 1071 aa24.54■■□□□ 1.52
NKX2-1-201ENST00000354822 NOL4O94818 638 aa24.54■■□□□ 1.52
NKX2-1-201ENST00000354822 RAD51AP2Q09MP3 1159 aa24.54■■□□□ 1.52
NKX2-1-201ENST00000354822 PABPC4Q13310 644 aaKnown RBP eCLIP24.54■■□□□ 1.52
NKX2-1-201ENST00000354822 KNOP1Q1ED39 458 aaKnown RBP24.54■■□□□ 1.52
NKX2-1-201ENST00000354822 HGSNATQ68CP4 663 aa24.54■■□□□ 1.52
NKX2-1-201ENST00000354822 FRMD5Q7Z6J6 570 aa24.54■■□□□ 1.52
NKX2-1-201ENST00000354822 CCDC155Q8N6L0 562 aa24.54■■□□□ 1.52
NKX2-1-201ENST00000354822 CAGE1Q8TC20 777 aa24.54■■□□□ 1.52
NKX2-1-201ENST00000354822 PDGFDQ9GZP0 370 aaPredicted RBP24.54■■□□□ 1.52
NKX2-1-201ENST00000354822 GOPCQ9HD26 462 aa24.54■■□□□ 1.52
NKX2-1-201ENST00000354822 VAV3Q9UKW4 847 aa24.54■■□□□ 1.52
NKX2-1-201ENST00000354822 SNX12Q9UMY4 172 aa24.54■■□□□ 1.52
NKX2-1-201ENST00000354822 ERCC3P19447 782 aa24.53■■□□□ 1.52
NKX2-1-201ENST00000354822 EPS15P42566 896 aa24.53■■□□□ 1.52
NKX2-1-201ENST00000354822 PSMC6P62333 389 aa24.53■■□□□ 1.52
NKX2-1-201ENST00000354822 RRP1BQ14684 758 aaKnown RBP24.53■■□□□ 1.52
NKX2-1-201ENST00000354822 PSMD1Q99460 953 aa24.53■■□□□ 1.52
NKX2-1-201ENST00000354822 LSM14BQ9BX40 385 aaKnown RBP24.53■■□□□ 1.52
NKX2-1-201ENST00000354822 TMX2Q9Y320 296 aa24.53■■□□□ 1.52
NKX2-1-201ENST00000354822 PDXKO00764 312 aa24.53■■□□□ 1.52
NKX2-1-201ENST00000354822 CALUO43852 315 aaPredicted RBP24.53■■□□□ 1.52
NKX2-1-201ENST00000354822 BAG6P46379 1132 aa24.53■■□□□ 1.52
NKX2-1-201ENST00000354822 EPM2AIP1Q7L775 607 aaPredicted RBP24.53■■□□□ 1.52
NKX2-1-201ENST00000354822 REEP2Q9BRK0 252 aa24.53■■□□□ 1.52
NKX2-1-201ENST00000354822 EYA4O95677 639 aa24.52■■□□□ 1.52
NKX2-1-201ENST00000354822 NR2F2P24468 414 aa24.52■■□□□ 1.52
NKX2-1-201ENST00000354822 HOXA13P31271 388 aaPredicted RBP24.52■■□□□ 1.52
NKX2-1-201ENST00000354822 ITIH3Q06033 890 aa24.52■■□□□ 1.52
NKX2-1-201ENST00000354822 MAP9Q49MG5 647 aa24.52■■□□□ 1.52
NKX2-1-201ENST00000354822 CAPZA3Q96KX2 299 aa24.52■■□□□ 1.52
NKX2-1-201ENST00000354822 NLRC4Q9NPP4 1024 aa24.52■■□□□ 1.52
NKX2-1-201ENST00000354822 MEIS1O00470 390 aa24.52■■□□□ 1.52
NKX2-1-201ENST00000354822 SF3B2Q13435 895 aaKnown RBP24.52■■□□□ 1.52
Retrieved 100 of 20,778 RNA–protein pairs in 16.2 ms