RNA–Protein interactions for RNA: ENST00000353909.7

MBD1-205, Transcript of methyl-CpG binding domain protein 1, humanhuman

TSL 1 (best) BASIC

Gene MBD1, Length 2,820 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MBD1-205ENST00000353909 NUP58Q9BVL2 599 aa17.23■□□□□ 0.35
MBD1-205ENST00000353909 TANGO6Q9C0B7 1094 aa17.23■□□□□ 0.35
MBD1-205ENST00000353909 NHEJ1Q9H9Q4 299 aaPredicted RBP17.23■□□□□ 0.35
MBD1-205ENST00000353909 FZD1Q9UP38 647 aa17.23■□□□□ 0.35
MBD1-205ENST00000353909 KCNMA1Q12791 1236 aa17.23■□□□□ 0.35
MBD1-205ENST00000353909 RETREG2Q8NC44 543 aa17.23■□□□□ 0.35
MBD1-205ENST00000353909 ZNF397Q8NF99 534 aaPredicted RBP17.23■□□□□ 0.35
MBD1-205ENST00000353909 LACRTQ9GZZ8 138 aa17.23■□□□□ 0.35
MBD1-205ENST00000353909 IKZF4Q9H2S9 585 aa17.23■□□□□ 0.35
MBD1-205ENST00000353909 COL20A1Q9P218 1284 aa17.23■□□□□ 0.35
MBD1-205ENST00000353909 COL4A3BPQ9Y5P4 624 aa17.23■□□□□ 0.35
MBD1-205ENST00000353909 NFIBO00712 420 aa17.22■□□□□ 0.35
MBD1-205ENST00000353909 PSMD10O75832 226 aa17.22■□□□□ 0.35
MBD1-205ENST00000353909 PRELPP51888 382 aa17.22■□□□□ 0.35
MBD1-205ENST00000353909 KCNA1Q09470 495 aa17.22■□□□□ 0.35
MBD1-205ENST00000353909 LRCH2Q5VUJ6 765 aa17.22■□□□□ 0.35
MBD1-205ENST00000353909 TPH2Q8IWU9 490 aa17.22■□□□□ 0.35
MBD1-205ENST00000353909 HSD17B14Q9BPX1 270 aa17.22■□□□□ 0.35
MBD1-205ENST00000353909 CRACR2AQ9BSW2 395 aa17.22■□□□□ 0.35
MBD1-205ENST00000353909 VPS33BQ9H267 617 aa17.22■□□□□ 0.35
MBD1-205ENST00000353909 ZNF446Q9NWS9 450 aa17.22■□□□□ 0.35
MBD1-205ENST00000353909 WRAP73Q9P2S5 460 aaPredicted RBP17.22■□□□□ 0.35
MBD1-205ENST00000353909 DUSP10Q9Y6W6 482 aa17.22■□□□□ 0.35
MBD1-205ENST00000353909 FER1L6Q2WGJ9 1857 aa17.22■□□□□ 0.35
MBD1-205ENST00000353909 ZNF263O14978 683 aa17.22■□□□□ 0.35
MBD1-205ENST00000353909 SLITRK3O94933 977 aa17.22■□□□□ 0.35
MBD1-205ENST00000353909 MYBP10242 640 aa17.22■□□□□ 0.35
MBD1-205ENST00000353909 PTGER2P43116 358 aa17.22■□□□□ 0.35
MBD1-205ENST00000353909 TBC1D10BQ4KMP7 808 aaPredicted RBP17.22■□□□□ 0.35
MBD1-205ENST00000353909 CPXCR1Q8N123 301 aa17.22■□□□□ 0.35
MBD1-205ENST00000353909 DYDC2Q96IM9 177 aa17.22■□□□□ 0.35
MBD1-205ENST00000353909 ABCB11O95342 1321 aa17.22■□□□□ 0.35
MBD1-205ENST00000353909 PRPF6O94906 941 aaKnown RBP17.21■□□□□ 0.35
MBD1-205ENST00000353909 CCDC40Q4G0X9 1142 aa17.21■□□□□ 0.35
MBD1-205ENST00000353909 PKD2L1Q9P0L9 805 aa17.21■□□□□ 0.35
MBD1-205ENST00000353909 FEM1BQ9UK73 627 aa17.21■□□□□ 0.35
MBD1-205ENST00000353909 PITPNM2Q9BZ72 1349 aa17.21■□□□□ 0.35
MBD1-205ENST00000353909 FGFR1OPO95684 399 aaKnown RBP17.21■□□□□ 0.35
MBD1-205ENST00000353909 H2AFXP16104 143 aaPredicted RBP17.21■□□□□ 0.35
MBD1-205ENST00000353909 TGFB2P61812 414 aa17.21■□□□□ 0.35
MBD1-205ENST00000353909 CEP55Q53EZ4 464 aa17.21■□□□□ 0.35
MBD1-205ENST00000353909 FIGNQ5HY92 759 aa17.21■□□□□ 0.35
MBD1-205ENST00000353909 PRAMEF18Q5VWM3 479 aa17.21■□□□□ 0.35
MBD1-205ENST00000353909 IL31RAQ8NI17 732 aa17.21■□□□□ 0.35
MBD1-205ENST00000353909 HOMER2Q9NSB8 354 aa17.21■□□□□ 0.35
MBD1-205ENST00000353909 ARHGAP20Q9P2F6 1191 aa17.21■□□□□ 0.35
MBD1-205ENST00000353909 PUF60Q9UHX1 559 aaKnown RBP17.21■□□□□ 0.35
MBD1-205ENST00000353909 BCS1LQ9Y276 419 aa17.21■□□□□ 0.35
MBD1-205ENST00000353909 MRPL11Q9Y3B7 192 aaKnown RBP17.21■□□□□ 0.35
MBD1-205ENST00000353909 EFCAB8A8MWE9 144 aa17.2■□□□□ 0.34
MBD1-205ENST00000353909 RASSF7Q02833 373 aa17.2■□□□□ 0.34
MBD1-205ENST00000353909 SH2D4AQ9H788 454 aa17.2■□□□□ 0.34
MBD1-205ENST00000353909 CCPG1Q9ULG6 757 aa17.2■□□□□ 0.34
MBD1-205ENST00000353909 RABGAP1Q9Y3P9 1069 aa17.2■□□□□ 0.34
MBD1-205ENST00000353909 ATAD5Q96QE3 1844 aa17.2■□□□□ 0.34
MBD1-205ENST00000353909 LRRC53A6NM62 1247 aa17.2■□□□□ 0.34
MBD1-205ENST00000353909 ENC1O14682 589 aa17.2■□□□□ 0.34
MBD1-205ENST00000353909 ADAM9Q13443 819 aa17.2■□□□□ 0.34
MBD1-205ENST00000353909 TEX35Q5T0J7 233 aa17.2■□□□□ 0.34
MBD1-205ENST00000353909 FAM160B2Q86V87 743 aa17.2■□□□□ 0.34
MBD1-205ENST00000353909 SLC5A5Q92911 643 aa17.2■□□□□ 0.34
MBD1-205ENST00000353909 POLR3CQ9BUI4 534 aaPredicted RBP17.2■□□□□ 0.34
MBD1-205ENST00000353909 PLAGL2Q9UPG8 496 aa17.2■□□□□ 0.34
MBD1-205ENST00000353909 GJA3Q9Y6H8 435 aa17.2■□□□□ 0.34
MBD1-205ENST00000353909 A0A1W2PQJ5 194 aa17.2■□□□□ 0.34
MBD1-205ENST00000353909 DDX39AO00148 427 aaKnown RBP17.2■□□□□ 0.34
MBD1-205ENST00000353909 CCDC122Q5T0U0 273 aa17.2■□□□□ 0.34
MBD1-205ENST00000353909 RINT1Q6NUQ1 792 aa17.2■□□□□ 0.34
MBD1-205ENST00000353909 RRAGAQ7L523 313 aa17.2■□□□□ 0.34
MBD1-205ENST00000353909 MICALL2Q8IY33 904 aa17.2■□□□□ 0.34
MBD1-205ENST00000353909 BAP1Q92560 729 aa17.2■□□□□ 0.34
MBD1-205ENST00000353909 NLRC4Q9NPP4 1024 aa17.2■□□□□ 0.34
MBD1-205ENST00000353909 ZNHIT6Q9NWK9 470 aaKnown RBP17.2■□□□□ 0.34
MBD1-205ENST00000353909 CTAGE9A4FU28 777 aa17.19■□□□□ 0.34
MBD1-205ENST00000353909 PLA2G6O60733 806 aa17.19■□□□□ 0.34
MBD1-205ENST00000353909 GAS7O60861 476 aa17.19■□□□□ 0.34
MBD1-205ENST00000353909 ITGB5P18084 799 aa17.19■□□□□ 0.34
MBD1-205ENST00000353909 GMPSP49915 693 aaPredicted RBP17.19■□□□□ 0.34
MBD1-205ENST00000353909 CLCN6P51797 869 aa17.19■□□□□ 0.34
MBD1-205ENST00000353909 TRIM59Q8IWR1 403 aa17.19■□□□□ 0.34
MBD1-205ENST00000353909 HOOK2Q96ED9 719 aa17.19■□□□□ 0.34
MBD1-205ENST00000353909 ZSCAN20P17040 1043 aaPredicted RBP17.19■□□□□ 0.34
MBD1-205ENST00000353909 NR2F2P24468 414 aa17.19■□□□□ 0.34
MBD1-205ENST00000353909 NBPF12Q5TAG4 269 aaPredicted RBP17.19■□□□□ 0.34
MBD1-205ENST00000353909 ZNF577Q9BSK1 485 aa17.19■□□□□ 0.34
MBD1-205ENST00000353909 UNC45AQ9H3U1 944 aa17.19■□□□□ 0.34
MBD1-205ENST00000353909 RAVER2Q9HCJ3 691 aaKnown RBP17.19■□□□□ 0.34
MBD1-205ENST00000353909 HDAC6Q9UBN7 1215 aa17.19■□□□□ 0.34
MBD1-205ENST00000353909 SLC26A4O43511 780 aa17.18■□□□□ 0.34
MBD1-205ENST00000353909 NOL4O94818 638 aa17.18■□□□□ 0.34
MBD1-205ENST00000353909 EYA4O95677 639 aa17.18■□□□□ 0.34
MBD1-205ENST00000353909 ICAM1P05362 532 aa17.18■□□□□ 0.34
MBD1-205ENST00000353909 ZNF280AP59817 542 aaPredicted RBP17.18■□□□□ 0.34
MBD1-205ENST00000353909 RSRC2Q7L4I2 434 aaKnown RBP17.18■□□□□ 0.34
MBD1-205ENST00000353909 EPM2AIP1Q7L775 607 aaPredicted RBP17.18■□□□□ 0.34
MBD1-205ENST00000353909 CLEC4DQ8WXI8 215 aa17.18■□□□□ 0.34
MBD1-205ENST00000353909 HACL1Q9UJ83 578 aa17.18■□□□□ 0.34
MBD1-205ENST00000353909 CDC23Q9UJX2 597 aa17.18■□□□□ 0.34
MBD1-205ENST00000353909 PPP2R5CQ13362 524 aa17.18■□□□□ 0.34
MBD1-205ENST00000353909 MUM1L1Q5H9M0 696 aa17.18■□□□□ 0.34
Retrieved 100 of 20,778 RNA–protein pairs in 44.7 ms