RNA–Protein interactions for RNA: ENST00000352993.7

BRCA1-201, Transcript of BRCA1, DNA repair associated, humanhuman

TSL 5 BASIC

Gene BRCA1, Length 3,668 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-201ENST00000352993 CCDC38Q502W7 563 aa8.34□□□□□ -1.07
BRCA1-201ENST00000352993 CNNM4Q6P4Q7 775 aa8.34□□□□□ -1.07
BRCA1-201ENST00000352993 PDXDC1Q6P996 788 aa8.34□□□□□ -1.07
BRCA1-201ENST00000352993 FAM133AQ8N9E0 248 aa8.34□□□□□ -1.07
BRCA1-201ENST00000352993 TTLL11Q8NHH1 800 aa8.34□□□□□ -1.07
BRCA1-201ENST00000352993 IFT74Q96LB3 600 aa8.34□□□□□ -1.07
BRCA1-201ENST00000352993 AZI2Q9H6S1 392 aa8.34□□□□□ -1.07
BRCA1-201ENST00000352993 MLXIPLQ9NP71 852 aa8.34□□□□□ -1.07
BRCA1-201ENST00000352993 THRAP3Q9Y2W1 955 aaKnown RBP8.34□□□□□ -1.07
BRCA1-201ENST00000352993 ABCC12Q96J65 1359 aa8.34□□□□□ -1.08
BRCA1-201ENST00000352993 LRRD1A4D1F6 860 aa8.33□□□□□ -1.08
BRCA1-201ENST00000352993 PGRMC1O00264 195 aaKnown RBP8.33□□□□□ -1.08
BRCA1-201ENST00000352993 TRAF5O00463 557 aa8.33□□□□□ -1.08
BRCA1-201ENST00000352993 KLRC4O43908 158 aa8.33□□□□□ -1.08
BRCA1-201ENST00000352993 HIP1RO75146 1068 aa8.33□□□□□ -1.08
BRCA1-201ENST00000352993 LUC7L3O95232 432 aaKnown RBP8.33□□□□□ -1.08
BRCA1-201ENST00000352993 ATP2A2P16615 1042 aaKnown RBP8.33□□□□□ -1.08
BRCA1-201ENST00000352993 AMPD3Q01432 767 aa8.33□□□□□ -1.08
BRCA1-201ENST00000352993 NAALADL2Q58DX5 795 aa8.33□□□□□ -1.08
BRCA1-201ENST00000352993 FIGNQ5HY92 759 aa8.33□□□□□ -1.08
BRCA1-201ENST00000352993 DENND2CQ68D51 928 aa8.33□□□□□ -1.08
BRCA1-201ENST00000352993 ZNF772Q68DY9 489 aaPredicted RBP8.33□□□□□ -1.08
BRCA1-201ENST00000352993 CRELD2Q6UXH1 353 aaPredicted RBP8.33□□□□□ -1.08
BRCA1-201ENST00000352993 PEX26Q7Z412 305 aa8.33□□□□□ -1.08
BRCA1-201ENST00000352993 BLIDQ8IZY5 108 aa8.33□□□□□ -1.08
BRCA1-201ENST00000352993 TRIM51Q9BSJ1 452 aa8.33□□□□□ -1.08
BRCA1-201ENST00000352993 TMEM60Q9H2L4 133 aa8.33□□□□□ -1.08
BRCA1-201ENST00000352993 C5orf60A6NFR6 353 aa8.33□□□□□ -1.08
BRCA1-201ENST00000352993 ADAMTS3O15072 1205 aa8.33□□□□□ -1.08
BRCA1-201ENST00000352993 SMNDC1O75940 238 aaKnown RBP eCLIP8.33□□□□□ -1.08
BRCA1-201ENST00000352993 GNAT1P11488 350 aa8.33□□□□□ -1.08
BRCA1-201ENST00000352993 ITGA4P13612 1032 aa8.33□□□□□ -1.08
BRCA1-201ENST00000352993 PECAM1P16284 738 aaPredicted RBP8.33□□□□□ -1.08
BRCA1-201ENST00000352993 CCND1P24385 295 aa8.33□□□□□ -1.08
BRCA1-201ENST00000352993 PLTPP55058 493 aa8.33□□□□□ -1.08
BRCA1-201ENST00000352993 NAB2Q15742 525 aa8.33□□□□□ -1.08
BRCA1-201ENST00000352993 ERMARDQ5T6L9 678 aa8.33□□□□□ -1.08
BRCA1-201ENST00000352993 MEI1Q5TIA1 1274 aa8.33□□□□□ -1.08
BRCA1-201ENST00000352993 C1orf131Q8NDD1 294 aaKnown RBP8.33□□□□□ -1.08
BRCA1-201ENST00000352993 IQCDQ96DY2 449 aa8.33□□□□□ -1.08
BRCA1-201ENST00000352993 INPP4AQ96PE3 977 aaPredicted RBP8.33□□□□□ -1.08
BRCA1-201ENST00000352993 FMO2Q99518 471 aa8.33□□□□□ -1.08
BRCA1-201ENST00000352993 TSG101Q99816 390 aa8.33□□□□□ -1.08
BRCA1-201ENST00000352993 KCNK9Q9NPC2 374 aa8.33□□□□□ -1.08
BRCA1-201ENST00000352993 AGAP1Q9UPQ3 857 aa8.33□□□□□ -1.08
BRCA1-201ENST00000352993 NOC2LQ9Y3T9 749 aaKnown RBP8.33□□□□□ -1.08
BRCA1-201ENST00000352993 A0A087X0T9 212 aa8.33□□□□□ -1.08
BRCA1-201ENST00000352993 SPDYE3A6NKU9 549 aa8.33□□□□□ -1.08
BRCA1-201ENST00000352993 H0YGN5 161 aa8.33□□□□□ -1.08
BRCA1-201ENST00000352993 PJA2O43164 708 aa8.33□□□□□ -1.08
BRCA1-201ENST00000352993 SERPING1P05155 500 aa8.33□□□□□ -1.08
BRCA1-201ENST00000352993 FAM228BP0C875 321 aa8.33□□□□□ -1.08
BRCA1-201ENST00000352993 TRAPPC10P48553 1259 aa8.33□□□□□ -1.08
BRCA1-201ENST00000352993 ICA1Q05084 483 aa8.33□□□□□ -1.08
BRCA1-201ENST00000352993 PPP2R5BQ15173 497 aa8.33□□□□□ -1.08
BRCA1-201ENST00000352993 LETM2Q2VYF4 491 aa8.33□□□□□ -1.08
BRCA1-201ENST00000352993 FAM47AQ5JRC9 791 aa8.33□□□□□ -1.08
BRCA1-201ENST00000352993 ANKRD20A2Q5SQ80 823 aa8.33□□□□□ -1.08
BRCA1-201ENST00000352993 ANKRD20A1Q5TYW2 823 aa8.33□□□□□ -1.08
BRCA1-201ENST00000352993 ANKRD20A3Q5VUR7 823 aa8.33□□□□□ -1.08
BRCA1-201ENST00000352993 ARL6IP4Q66PJ3 421 aaKnown RBP8.33□□□□□ -1.08
BRCA1-201ENST00000352993 CCDC25Q86WR0 208 aa8.33□□□□□ -1.08
BRCA1-201ENST00000352993 LMNTD2Q8IXW0 634 aa8.33□□□□□ -1.08
BRCA1-201ENST00000352993 SRBD1Q8N5C6 995 aaKnown RBP8.33□□□□□ -1.08
BRCA1-201ENST00000352993 ANKRD42Q8N9B4 389 aa8.33□□□□□ -1.08
BRCA1-201ENST00000352993 FBF1Q8TES7 1133 aa8.33□□□□□ -1.08
BRCA1-201ENST00000352993 DCAF5Q96JK2 942 aa8.33□□□□□ -1.08
BRCA1-201ENST00000352993 PPP1R12CQ9BZL4 782 aa8.33□□□□□ -1.08
BRCA1-201ENST00000352993 ZCWPW1Q9H0M4 648 aa8.33□□□□□ -1.08
BRCA1-201ENST00000352993 LRRC4CQ9HCJ2 640 aa8.33□□□□□ -1.08
BRCA1-201ENST00000352993 ZFATQ9P243 1243 aa8.33□□□□□ -1.08
BRCA1-201ENST00000352993 NFS1Q9Y697 457 aa8.33□□□□□ -1.08
BRCA1-201ENST00000352993 RGPD2P0DJD1 1756 aa8.33□□□□□ -1.08
BRCA1-201ENST00000352993 F8VZ95 297 aa8.32□□□□□ -1.08
BRCA1-201ENST00000352993 NMT2O60551 498 aa8.32□□□□□ -1.08
BRCA1-201ENST00000352993 SHBGP04278 402 aa8.32□□□□□ -1.08
BRCA1-201ENST00000352993 KRT13P13646 458 aa8.32□□□□□ -1.08
BRCA1-201ENST00000352993 GNAT2P19087 354 aa8.32□□□□□ -1.08
BRCA1-201ENST00000352993 CALML3P27482 149 aa8.32□□□□□ -1.08
BRCA1-201ENST00000352993 TECP42680 631 aa8.32□□□□□ -1.08
BRCA1-201ENST00000352993 INHBEP58166 350 aa8.32□□□□□ -1.08
BRCA1-201ENST00000352993 SEMA3FQ13275 785 aa8.32□□□□□ -1.08
BRCA1-201ENST00000352993 ASIC2Q16515 512 aa8.32□□□□□ -1.08
BRCA1-201ENST00000352993 KIF6Q6ZMV9 814 aa8.32□□□□□ -1.08
BRCA1-201ENST00000352993 OTUD6AQ7L8S5 288 aa8.32□□□□□ -1.08
BRCA1-201ENST00000352993 HEATR3Q7Z4Q2 680 aa8.32□□□□□ -1.08
BRCA1-201ENST00000352993 SLC17A8Q8NDX2 589 aa8.32□□□□□ -1.08
BRCA1-201ENST00000352993 CALML4Q96GE6 196 aa8.32□□□□□ -1.08
BRCA1-201ENST00000352993 TRIM9Q9C026 710 aa8.32□□□□□ -1.08
BRCA1-201ENST00000352993 SEMA6BQ9H3T3 888 aa8.32□□□□□ -1.08
BRCA1-201ENST00000352993 ZHX3Q9H4I2 956 aa8.32□□□□□ -1.08
BRCA1-201ENST00000352993 PAPOLBQ9NRJ5 636 aaKnown RBP8.32□□□□□ -1.08
BRCA1-201ENST00000352993 HOMER3Q9NSC5 361 aa8.32□□□□□ -1.08
BRCA1-201ENST00000352993 SIK3Q9Y2K2 1263 aa8.32□□□□□ -1.08
BRCA1-201ENST00000352993 PDE8BO95263 885 aa8.32□□□□□ -1.08
BRCA1-201ENST00000352993 GSTA1P08263 222 aa8.32□□□□□ -1.08
BRCA1-201ENST00000352993 CALM1P0DP23 149 aa8.32□□□□□ -1.08
BRCA1-201ENST00000352993 CALM2P0DP24 149 aa8.32□□□□□ -1.08
BRCA1-201ENST00000352993 CALM3P0DP25 149 aa8.32□□□□□ -1.08
BRCA1-201ENST00000352993 POLE2P56282 527 aa8.32□□□□□ -1.08
Retrieved 100 of 20,778 RNA–protein pairs in 21.2 ms