RNA–Protein interactions for RNA: ENST00000349748.7

CAPN3-203, Transcript of calpain 3, humanhuman

TSL 1 (best) BASIC

Gene CAPN3, Length 2,955 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN3-203ENST00000349748 STK32AQ8WU08 396 aa11.61□□□□□ -0.55
CAPN3-203ENST00000349748 FERMT2Q96AC1 680 aa11.61□□□□□ -0.55
CAPN3-203ENST00000349748 NUDCD1Q96RS6 583 aa11.61□□□□□ -0.55
CAPN3-203ENST00000349748 FBXO2Q9UK22 296 aaPredicted RBP11.61□□□□□ -0.55
CAPN3-203ENST00000349748 PAIP2BQ9ULR5 123 aaKnown RBP11.61□□□□□ -0.55
CAPN3-203ENST00000349748 GMEB1Q9Y692 573 aa11.61□□□□□ -0.55
CAPN3-203ENST00000349748 CPDO75976 1380 aa11.61□□□□□ -0.55
CAPN3-203ENST00000349748 LTN1O94822 1766 aa11.61□□□□□ -0.55
CAPN3-203ENST00000349748 SH2B2O14492 632 aaPredicted RBP11.61□□□□□ -0.55
CAPN3-203ENST00000349748 BUB1O43683 1085 aa11.61□□□□□ -0.55
CAPN3-203ENST00000349748 IGHMBP2P38935 993 aaKnown RBP11.61□□□□□ -0.55
CAPN3-203ENST00000349748 OLFML2BQ68BL8 750 aa11.61□□□□□ -0.55
CAPN3-203ENST00000349748 SLF2Q8IX21 1173 aa11.61□□□□□ -0.55
CAPN3-203ENST00000349748 SMC1BQ8NDV3 1235 aa11.61□□□□□ -0.55
CAPN3-203ENST00000349748 ASAP3Q8TDY4 903 aa11.61□□□□□ -0.55
CAPN3-203ENST00000349748 IFT74Q96LB3 600 aa11.61□□□□□ -0.55
CAPN3-203ENST00000349748 IFIH1Q9BYX4 1025 aaKnown RBP11.61□□□□□ -0.55
CAPN3-203ENST00000349748 CAPN11Q9UMQ6 739 aa11.61□□□□□ -0.55
CAPN3-203ENST00000349748 MAP3K2Q9Y2U5 619 aa11.61□□□□□ -0.55
CAPN3-203ENST00000349748 SMIM23A6NLE4 172 aa11.61□□□□□ -0.55
CAPN3-203ENST00000349748 BAG3O95817 575 aa11.61□□□□□ -0.55
CAPN3-203ENST00000349748 MEA1Q16626 185 aa11.61□□□□□ -0.55
CAPN3-203ENST00000349748 NCCRP1Q6ZVX7 275 aaPredicted RBP11.61□□□□□ -0.55
CAPN3-203ENST00000349748 FITM2Q8N6M3 262 aa11.61□□□□□ -0.55
CAPN3-203ENST00000349748 MB21D1Q8N884 522 aa11.61□□□□□ -0.55
CAPN3-203ENST00000349748 TTC8Q8TAM2 541 aa11.61□□□□□ -0.55
CAPN3-203ENST00000349748 EEF2KMTQ96G04 330 aa11.61□□□□□ -0.55
CAPN3-203ENST00000349748 KAZALD1Q96I82 304 aa11.61□□□□□ -0.55
CAPN3-203ENST00000349748 HIC2Q96JB3 615 aa11.61□□□□□ -0.55
CAPN3-203ENST00000349748 ETNK1Q9HBU6 452 aa11.61□□□□□ -0.55
CAPN3-203ENST00000349748 ATP8A2Q9NTI2 1148 aa11.61□□□□□ -0.55
CAPN3-203ENST00000349748 CCDC87Q9NVE4 849 aa11.61□□□□□ -0.55
CAPN3-203ENST00000349748 HSFX1Q9UBD0 423 aa11.61□□□□□ -0.55
CAPN3-203ENST00000349748 COL16A1Q07092 1604 aaPredicted RBP11.6□□□□□ -0.55
CAPN3-203ENST00000349748 AHDC1Q5TGY3 1603 aaPredicted RBP11.6□□□□□ -0.55
CAPN3-203ENST00000349748 CAMTA1Q9Y6Y1 1673 aa11.6□□□□□ -0.55
CAPN3-203ENST00000349748 SNX3O60493 162 aa11.6□□□□□ -0.55
CAPN3-203ENST00000349748 ATP9AO75110 1047 aa11.6□□□□□ -0.55
CAPN3-203ENST00000349748 GSTA2P09210 222 aa11.6□□□□□ -0.55
CAPN3-203ENST00000349748 SPA17Q15506 151 aa11.6□□□□□ -0.55
CAPN3-203ENST00000349748 ZC3H18Q86VM9 953 aaKnown RBP11.6□□□□□ -0.55
CAPN3-203ENST00000349748 AGBL1Q96MI9 1066 aa11.6□□□□□ -0.55
CAPN3-203ENST00000349748 OXCT2Q9BYC2 517 aaPredicted RBP11.6□□□□□ -0.55
CAPN3-203ENST00000349748 KRT23Q9C075 422 aa11.6□□□□□ -0.55
CAPN3-203ENST00000349748 BRD8Q9H0E9 1235 aa11.6□□□□□ -0.55
CAPN3-203ENST00000349748 CNOT10Q9H9A5 744 aaKnown RBP11.6□□□□□ -0.55
CAPN3-203ENST00000349748 ZNHIT6Q9NWK9 470 aaKnown RBP11.6□□□□□ -0.55
CAPN3-203ENST00000349748 NMRK1Q9NWW6 199 aa11.6□□□□□ -0.55
CAPN3-203ENST00000349748 CYP39A1Q9NYL5 469 aa11.6□□□□□ -0.55
CAPN3-203ENST00000349748 WDR37Q9Y2I8 494 aa11.6□□□□□ -0.55
CAPN3-203ENST00000349748 KDM3BQ7LBC6 1761 aa11.6□□□□□ -0.55
CAPN3-203ENST00000349748 UBTFL6P0CB48 400 aaPredicted RBP11.6□□□□□ -0.55
CAPN3-203ENST00000349748 ZCCHC18P0CG32 403 aa11.6□□□□□ -0.55
CAPN3-203ENST00000349748 RRAGBQ5VZM2 374 aa11.6□□□□□ -0.55
CAPN3-203ENST00000349748 PIGOQ8TEQ8 1089 aa11.6□□□□□ -0.55
CAPN3-203ENST00000349748 CLMNQ96JQ2 1002 aa11.6□□□□□ -0.55
CAPN3-203ENST00000349748 BLZF1Q9H2G9 400 aa11.6□□□□□ -0.55
CAPN3-203ENST00000349748 HELLSQ9NRZ9 838 aa11.6□□□□□ -0.55
CAPN3-203ENST00000349748 C9orf78Q9NZ63 289 aaPredicted RBP11.6□□□□□ -0.55
CAPN3-203ENST00000349748 PCDH11XQ9BZA7 1347 aa11.6□□□□□ -0.55
CAPN3-203ENST00000349748 NCAPD2Q15021 1401 aa11.6□□□□□ -0.55
CAPN3-203ENST00000349748 WFS1O76024 890 aa11.59□□□□□ -0.55
CAPN3-203ENST00000349748 TRIM21P19474 475 aaKnown RBP11.59□□□□□ -0.55
CAPN3-203ENST00000349748 KIAA0753Q2KHM9 967 aa11.59□□□□□ -0.55
CAPN3-203ENST00000349748 SLC15A3Q8IY34 581 aa11.59□□□□□ -0.55
CAPN3-203ENST00000349748 SUPV3L1Q8IYB8 786 aaKnown RBP eCLIP11.59□□□□□ -0.55
CAPN3-203ENST00000349748 PAGE5Q96GU1 130 aa11.59□□□□□ -0.55
CAPN3-203ENST00000349748 CCDC42Q96M95 316 aa11.59□□□□□ -0.55
CAPN3-203ENST00000349748 NACA2Q9H009 215 aa11.59□□□□□ -0.55
CAPN3-203ENST00000349748 CSRNP2Q9H175 543 aa11.59□□□□□ -0.55
CAPN3-203ENST00000349748 ADAM7Q9H2U9 754 aa11.59□□□□□ -0.55
CAPN3-203ENST00000349748 INIPQ9NRY2 104 aa11.59□□□□□ -0.55
CAPN3-203ENST00000349748 PACSIN2Q9UNF0 486 aaPredicted RBP11.59□□□□□ -0.55
CAPN3-203ENST00000349748 PCDHA13Q9Y5I0 950 aa11.59□□□□□ -0.55
CAPN3-203ENST00000349748 ENTPD5O75356 428 aa11.59□□□□□ -0.55
CAPN3-203ENST00000349748 PTPREP23469 700 aa11.59□□□□□ -0.55
CAPN3-203ENST00000349748 TOB1P50616 345 aaPredicted RBP11.59□□□□□ -0.55
CAPN3-203ENST00000349748 ADCY1Q08828 1119 aa11.59□□□□□ -0.55
CAPN3-203ENST00000349748 TYW1BQ6NUM6 668 aa11.59□□□□□ -0.55
CAPN3-203ENST00000349748 NELFBQ8WX92 580 aa11.59□□□□□ -0.55
CAPN3-203ENST00000349748 CENPTQ96BT3 561 aa11.59□□□□□ -0.55
CAPN3-203ENST00000349748 LRRC45Q96CN5 670 aa11.59□□□□□ -0.55
CAPN3-203ENST00000349748 EPSTI1Q96J88 318 aa11.59□□□□□ -0.55
CAPN3-203ENST00000349748 DHRS1Q96LJ7 313 aa11.59□□□□□ -0.55
CAPN3-203ENST00000349748 SPATA16Q9BXB7 569 aa11.59□□□□□ -0.55
CAPN3-203ENST00000349748 PCDH18Q9HCL0 1135 aa11.59□□□□□ -0.55
CAPN3-203ENST00000349748 FGFR1OP2Q9NVK5 253 aa11.59□□□□□ -0.55
CAPN3-203ENST00000349748 NPHP3-ACAD11A0A0J9YXS1 232 aa11.58□□□□□ -0.55
CAPN3-203ENST00000349748 TLDC2A0PJX2 215 aa11.58□□□□□ -0.55
CAPN3-203ENST00000349748 NVLO15381 856 aaKnown RBP11.58□□□□□ -0.55
CAPN3-203ENST00000349748 CCDC166P0CW27 439 aa11.58□□□□□ -0.55
CAPN3-203ENST00000349748 IARSP41252 1262 aaKnown RBP11.58□□□□□ -0.55
CAPN3-203ENST00000349748 LSAMPQ13449 338 aa11.58□□□□□ -0.55
CAPN3-203ENST00000349748 CCDC92Q53HC0 331 aaPredicted RBP11.58□□□□□ -0.55
CAPN3-203ENST00000349748 CMPK2Q5EBM0 449 aa11.58□□□□□ -0.55
CAPN3-203ENST00000349748 TMC4Q7Z404 712 aa11.58□□□□□ -0.55
CAPN3-203ENST00000349748 SESTD1Q86VW0 696 aa11.58□□□□□ -0.55
CAPN3-203ENST00000349748 GBP7Q8N8V2 638 aaPredicted RBP11.58□□□□□ -0.55
CAPN3-203ENST00000349748 TLCD1Q96CP7 247 aa11.58□□□□□ -0.55
CAPN3-203ENST00000349748 MTMR8Q96EF0 704 aa11.58□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 25.2 ms