RNA–Protein interactions for RNA: ENST00000346162.10

SRPK1-201, Transcript of SRSF protein kinase 1, humanhuman

TSL 2

Gene SRPK1, Length 4,762 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRPK1-201ENST00000346162 DHX40Q8IX18 779 aaKnown RBP16.81■□□□□ 0.28
SRPK1-201ENST00000346162 ZNF473Q8WTR7 871 aaKnown RBP16.81■□□□□ 0.28
SRPK1-201ENST00000346162 NSMCE1Q8WV22 266 aa16.81■□□□□ 0.28
SRPK1-201ENST00000346162 DTNBP1Q96EV8 351 aa16.81■□□□□ 0.28
SRPK1-201ENST00000346162 AMFRQ9UKV5 643 aa16.81■□□□□ 0.28
SRPK1-201ENST00000346162 BPIFA3Q9BQP9 254 aa16.81■□□□□ 0.28
SRPK1-201ENST00000346162 DDX23Q9BUQ8 820 aaKnown RBP16.81■□□□□ 0.28
SRPK1-201ENST00000346162 DBNDD1Q9H9R9 158 aa16.81■□□□□ 0.28
SRPK1-201ENST00000346162 DISC1Q9NRI5 854 aa16.81■□□□□ 0.28
SRPK1-201ENST00000346162 ANAPC4Q9UJX5 808 aa16.81■□□□□ 0.28
SRPK1-201ENST00000346162 ADGRG1Q9Y653 693 aa16.81■□□□□ 0.28
SRPK1-201ENST00000346162 UTYO14607 1347 aa16.8■□□□□ 0.28
SRPK1-201ENST00000346162 FAM170AA1A519 330 aa16.8■□□□□ 0.28
SRPK1-201ENST00000346162 CAND2O75155 1236 aa16.8■□□□□ 0.28
SRPK1-201ENST00000346162 H2AFZP0C0S5 128 aa16.8■□□□□ 0.28
SRPK1-201ENST00000346162 FOXR1Q6PIV2 292 aa16.8■□□□□ 0.28
SRPK1-201ENST00000346162 H2AFVQ71UI9 128 aa16.8■□□□□ 0.28
SRPK1-201ENST00000346162 CEP70Q8NHQ1 597 aa16.8■□□□□ 0.28
SRPK1-201ENST00000346162 HNRNPLLQ8WVV9 542 aaKnown RBP16.8■□□□□ 0.28
SRPK1-201ENST00000346162 EPN3Q9H201 632 aa16.8■□□□□ 0.28
SRPK1-201ENST00000346162 RIC8AQ9NPQ8 531 aa16.8■□□□□ 0.28
SRPK1-201ENST00000346162 TXLNGQ9NUQ3 528 aa16.8■□□□□ 0.28
SRPK1-201ENST00000346162 ATP8A1Q9Y2Q0 1164 aa16.8■□□□□ 0.28
SRPK1-201ENST00000346162 COL15A1P39059 1388 aa16.8■□□□□ 0.28
SRPK1-201ENST00000346162 TRIM37O94972 964 aa16.8■□□□□ 0.28
SRPK1-201ENST00000346162 MAN2A1Q16706 1144 aa16.8■□□□□ 0.28
SRPK1-201ENST00000346162 BEND6Q5SZJ8 279 aaPredicted RBP16.8■□□□□ 0.28
SRPK1-201ENST00000346162 PLAAQ9Y263 795 aa16.8■□□□□ 0.28
SRPK1-201ENST00000346162 USP32Q8NFA0 1604 aa16.8■□□□□ 0.28
SRPK1-201ENST00000346162 STXBP3O00186 592 aa16.8■□□□□ 0.28
SRPK1-201ENST00000346162 FERP16591 822 aa16.8■□□□□ 0.28
SRPK1-201ENST00000346162 CCDC105Q8IYK2 499 aa16.8■□□□□ 0.28
SRPK1-201ENST00000346162 SH3RF3Q8TEJ3 882 aaPredicted RBP16.8■□□□□ 0.28
SRPK1-201ENST00000346162 HOOK2Q96ED9 719 aa16.8■□□□□ 0.28
SRPK1-201ENST00000346162 ZNF711Q9Y462 761 aa16.8■□□□□ 0.28
SRPK1-201ENST00000346162 TESPA1A2RU30 521 aaPredicted RBP16.8■□□□□ 0.28
SRPK1-201ENST00000346162 KIF28PB7ZC32 967 aa16.8■□□□□ 0.28
SRPK1-201ENST00000346162 MAP3K7O43318 606 aa16.8■□□□□ 0.28
SRPK1-201ENST00000346162 NR2F2P24468 414 aa16.8■□□□□ 0.28
SRPK1-201ENST00000346162 CASP1P29466 404 aa16.8■□□□□ 0.28
SRPK1-201ENST00000346162 TRPC3Q13507 836 aa16.8■□□□□ 0.28
SRPK1-201ENST00000346162 EXOC3L4Q17RC7 722 aa16.8■□□□□ 0.28
SRPK1-201ENST00000346162 SH2D3CQ8N5H7 860 aa16.8■□□□□ 0.28
SRPK1-201ENST00000346162 CSRNP1Q96S65 589 aa16.8■□□□□ 0.28
SRPK1-201ENST00000346162 CFAP73A6NFT4 308 aa16.79■□□□□ 0.28
SRPK1-201ENST00000346162 ARHGAP42A6NI28 874 aa16.79■□□□□ 0.28
SRPK1-201ENST00000346162 VPS41P49754 854 aa16.79■□□□□ 0.28
SRPK1-201ENST00000346162 TNFAIP1Q13829 316 aa16.79■□□□□ 0.28
SRPK1-201ENST00000346162 PFKFB3Q16875 520 aaPredicted RBP16.79■□□□□ 0.28
SRPK1-201ENST00000346162 TRAF3IP1Q8TDR0 691 aaPredicted RBP16.79■□□□□ 0.28
SRPK1-201ENST00000346162 MIEF2Q96C03 454 aa16.79■□□□□ 0.28
SRPK1-201ENST00000346162 NMT2O60551 498 aa16.79■□□□□ 0.28
SRPK1-201ENST00000346162 IRX4P78413 519 aa16.79■□□□□ 0.28
SRPK1-201ENST00000346162 DHX9Q08211 1270 aaKnown RBP16.79■□□□□ 0.28
SRPK1-201ENST00000346162 KRT31Q15323 416 aa16.79■□□□□ 0.28
SRPK1-201ENST00000346162 PDCD7Q8N8D1 485 aaKnown RBP16.79■□□□□ 0.28
SRPK1-201ENST00000346162 QTRT2Q9H974 415 aaKnown RBP16.79■□□□□ 0.28
SRPK1-201ENST00000346162 GDAQ9Y2T3 454 aa16.79■□□□□ 0.28
SRPK1-201ENST00000346162 LAMB3Q13751 1172 aa16.79■□□□□ 0.28
SRPK1-201ENST00000346162 PRKG1Q13976 671 aa16.79■□□□□ 0.28
SRPK1-201ENST00000346162 UAP1Q16222 522 aaPredicted RBP16.79■□□□□ 0.28
SRPK1-201ENST00000346162 CLEC11AQ9Y240 323 aa16.79■□□□□ 0.28
SRPK1-201ENST00000346162 AP5Z1O43299 807 aa16.78■□□□□ 0.28
SRPK1-201ENST00000346162 SPDYE1Q8NFV5 336 aaPredicted RBP16.78■□□□□ 0.28
SRPK1-201ENST00000346162 TSNARE1Q96NA8 513 aa16.78■□□□□ 0.28
SRPK1-201ENST00000346162 ZNF446Q9NWS9 450 aa16.78■□□□□ 0.28
SRPK1-201ENST00000346162 CACNB1Q02641 598 aaPredicted RBP16.78■□□□□ 0.28
SRPK1-201ENST00000346162 RASSF7Q02833 373 aa16.78■□□□□ 0.28
SRPK1-201ENST00000346162 CYB5D1Q6P9G0 228 aa16.78■□□□□ 0.28
SRPK1-201ENST00000346162 TMEM47Q9BQJ4 181 aa16.78■□□□□ 0.28
SRPK1-201ENST00000346162 TEKT3Q9BXF9 490 aa16.78■□□□□ 0.28
SRPK1-201ENST00000346162 NOP56O00567 594 aaKnown RBP16.78■□□□□ 0.28
SRPK1-201ENST00000346162 CSF1RP07333 972 aa16.78■□□□□ 0.28
SRPK1-201ENST00000346162 ZBED6P86452 979 aa16.78■□□□□ 0.28
SRPK1-201ENST00000346162 SWT1Q5T5J6 900 aaKnown RBP16.78■□□□□ 0.28
SRPK1-201ENST00000346162 SHC4Q6S5L8 630 aa16.78■□□□□ 0.28
SRPK1-201ENST00000346162 ST13P4Q8IZP2 240 aaPredicted RBP16.78■□□□□ 0.28
SRPK1-201ENST00000346162 SH3GLB2Q9NR46 395 aa16.78■□□□□ 0.28
SRPK1-201ENST00000346162 K7ENM7 598 aa16.78■□□□□ 0.28
SRPK1-201ENST00000346162 MFAP3LO75121 409 aa16.78■□□□□ 0.28
SRPK1-201ENST00000346162 CYP27A1Q02318 531 aa16.78■□□□□ 0.28
SRPK1-201ENST00000346162 ODR4Q5SWX8 454 aa16.78■□□□□ 0.28
SRPK1-201ENST00000346162 TMED8Q6PL24 325 aaPredicted RBP16.78■□□□□ 0.28
SRPK1-201ENST00000346162 OTUD6AQ7L8S5 288 aa16.78■□□□□ 0.28
SRPK1-201ENST00000346162 GDF11O95390 407 aa16.77■□□□□ 0.28
SRPK1-201ENST00000346162 TBC1D9BQ66K14 1250 aa16.77■□□□□ 0.28
SRPK1-201ENST00000346162 DYDC2Q96IM9 177 aa16.77■□□□□ 0.28
SRPK1-201ENST00000346162 THAP9Q9H5L6 903 aa16.77■□□□□ 0.28
SRPK1-201ENST00000346162 PNPLA7Q6ZV29 1317 aa16.77■□□□□ 0.28
SRPK1-201ENST00000346162 TNNI1P19237 187 aa16.77■□□□□ 0.28
SRPK1-201ENST00000346162 MSH2P43246 934 aa16.77■□□□□ 0.28
SRPK1-201ENST00000346162 RAD23BP54727 409 aa16.77■□□□□ 0.28
SRPK1-201ENST00000346162 CUL4BQ13620 913 aa16.77■□□□□ 0.28
SRPK1-201ENST00000346162 CC2D2BQ6DHV5 1058 aa16.77■□□□□ 0.28
SRPK1-201ENST00000346162 KRT26Q7Z3Y9 468 aa16.77■□□□□ 0.28
SRPK1-201ENST00000346162 SLC44A5Q8NCS7 719 aa16.77■□□□□ 0.28
SRPK1-201ENST00000346162 FAM84BQ96KN1 310 aaPredicted RBP16.77■□□□□ 0.28
SRPK1-201ENST00000346162 DHX36Q9H2U1 1008 aaKnown RBP16.77■□□□□ 0.28
SRPK1-201ENST00000346162 STOML1Q9UBI4 398 aa16.77■□□□□ 0.28
SRPK1-201ENST00000346162 COL3A1P02461 1466 aaPredicted RBP16.77■□□□□ 0.28
Retrieved 100 of 20,778 RNA–protein pairs in 53.8 ms