RNA–Protein interactions for RNA: ENST00000345795.6

CASC4-202, Transcript of cancer susceptibility 4, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene CASC4, Length 3,764 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CASC4-202ENST00000345795 PAXIP1Q6ZW49 1069 aaPredicted RBP14.63□□□□□ -0.07
CASC4-202ENST00000345795 UNC13DQ70J99 1090 aa14.63□□□□□ -0.07
CASC4-202ENST00000345795 CCDC25Q86WR0 208 aa14.63□□□□□ -0.07
CASC4-202ENST00000345795 CERS3Q8IU89 383 aa14.63□□□□□ -0.07
CASC4-202ENST00000345795 ANKRD35Q8N283 1001 aa14.63□□□□□ -0.07
CASC4-202ENST00000345795 MRRFQ96E11 262 aaKnown RBP14.63□□□□□ -0.07
CASC4-202ENST00000345795 DHTKD1Q96HY7 919 aaPredicted RBP14.63□□□□□ -0.07
CASC4-202ENST00000345795 EIF2AK1Q9BQI3 630 aaKnown RBP14.63□□□□□ -0.07
CASC4-202ENST00000345795 LRRC27Q9C0I9 530 aa14.63□□□□□ -0.07
CASC4-202ENST00000345795 TLDC2A0PJX2 215 aa14.63□□□□□ -0.07
CASC4-202ENST00000345795 ZEB2O60315 1214 aa14.63□□□□□ -0.07
CASC4-202ENST00000345795 ARP10275 920 aa14.63□□□□□ -0.07
CASC4-202ENST00000345795 RCAN1P53805 252 aa14.63□□□□□ -0.07
CASC4-202ENST00000345795 COG2Q14746 738 aa14.63□□□□□ -0.07
CASC4-202ENST00000345795 EXOC3L4Q17RC7 722 aa14.63□□□□□ -0.07
CASC4-202ENST00000345795 SND1Q7KZF4 910 aaKnown RBP eCLIP14.63□□□□□ -0.07
CASC4-202ENST00000345795 SH3BP5LQ7L8J4 393 aa14.63□□□□□ -0.07
CASC4-202ENST00000345795 VPS36Q86VN1 386 aa14.63□□□□□ -0.07
CASC4-202ENST00000345795 RIN2Q8WYP3 895 aaPredicted RBP14.63□□□□□ -0.07
CASC4-202ENST00000345795 GCNT4Q9P109 453 aa14.63□□□□□ -0.07
CASC4-202ENST00000345795 ZNF142P52746 1687 aaPredicted RBP14.63□□□□□ -0.07
CASC4-202ENST00000345795 ATP2C2O75185 946 aa14.63□□□□□ -0.07
CASC4-202ENST00000345795 GCLMP48507 274 aa14.63□□□□□ -0.07
CASC4-202ENST00000345795 KCNH2Q12809 1159 aa14.63□□□□□ -0.07
CASC4-202ENST00000345795 CRY2Q49AN0 593 aa14.63□□□□□ -0.07
CASC4-202ENST00000345795 GRIPAP1Q4V328 841 aa14.63□□□□□ -0.07
CASC4-202ENST00000345795 C2CD6Q53TS8 623 aa14.63□□□□□ -0.07
CASC4-202ENST00000345795 CDR2LQ86X02 465 aaPredicted RBP14.63□□□□□ -0.07
CASC4-202ENST00000345795 TNFRSF25Q93038 417 aa14.63□□□□□ -0.07
CASC4-202ENST00000345795 PNMA5Q96PV4 448 aa14.63□□□□□ -0.07
CASC4-202ENST00000345795 RMDN3Q96TC7 470 aa14.63□□□□□ -0.07
CASC4-202ENST00000345795 MTA3Q9BTC8 594 aa14.63□□□□□ -0.07
CASC4-202ENST00000345795 PIM2Q9P1W9 311 aa14.63□□□□□ -0.07
CASC4-202ENST00000345795 EEF1GP26641 437 aaKnown RBP14.62□□□□□ -0.07
CASC4-202ENST00000345795 RUSC1Q9BVN2 902 aa14.62□□□□□ -0.07
CASC4-202ENST00000345795 AP1M1Q9BXS5 423 aa14.62□□□□□ -0.07
CASC4-202ENST00000345795 YDJCA8MPS7 323 aa14.62□□□□□ -0.07
CASC4-202ENST00000345795 IPO5O00410 1097 aaKnown RBP14.62□□□□□ -0.07
CASC4-202ENST00000345795 MTERF2Q49AM1 385 aa14.62□□□□□ -0.07
CASC4-202ENST00000345795 CEP112Q8N8E3 955 aa14.62□□□□□ -0.07
CASC4-202ENST00000345795 CCSER1Q9C0I3 900 aa14.62□□□□□ -0.07
CASC4-202ENST00000345795 SLIT2O94813 1529 aa14.62□□□□□ -0.07
CASC4-202ENST00000345795 SLC16A4O15374 487 aa14.62□□□□□ -0.07
CASC4-202ENST00000345795 MAN2A1Q16706 1144 aa14.62□□□□□ -0.07
CASC4-202ENST00000345795 SEZ6Q53EL9 994 aa14.62□□□□□ -0.07
CASC4-202ENST00000345795 NBPF12Q5TAG4 269 aaPredicted RBP14.62□□□□□ -0.07
CASC4-202ENST00000345795 GIMAP8Q8ND71 665 aaPredicted RBP14.62□□□□□ -0.07
CASC4-202ENST00000345795 WDR11Q9BZH6 1224 aa14.62□□□□□ -0.07
CASC4-202ENST00000345795 EHMT1Q9H9B1 1298 aa14.62□□□□□ -0.07
CASC4-202ENST00000345795 BLOC1S4Q9NUP1 217 aa14.62□□□□□ -0.07
CASC4-202ENST00000345795 EML1O00423 815 aa14.61□□□□□ -0.07
CASC4-202ENST00000345795 HPDP32754 393 aaPredicted RBP14.61□□□□□ -0.07
CASC4-202ENST00000345795 LXNQ9BS40 222 aa14.61□□□□□ -0.07
CASC4-202ENST00000345795 CDC23Q9UJX2 597 aa14.61□□□□□ -0.07
CASC4-202ENST00000345795 MYO5AQ9Y4I1 1855 aaKnown RBP14.61□□□□□ -0.07
CASC4-202ENST00000345795 LRRIQ4A6NIV6 560 aa14.61□□□□□ -0.07
CASC4-202ENST00000345795 SMC1AQ14683 1233 aaKnown RBP14.61□□□□□ -0.07
CASC4-202ENST00000345795 ZNF394Q53GI3 561 aa14.61□□□□□ -0.07
CASC4-202ENST00000345795 ANGEL2Q5VTE6 544 aaKnown RBP14.61□□□□□ -0.07
CASC4-202ENST00000345795 POTEAQ6S8J7 498 aa14.61□□□□□ -0.07
CASC4-202ENST00000345795 NLRX1Q86UT6 975 aa14.61□□□□□ -0.07
CASC4-202ENST00000345795 SUPT20HQ8NEM7 779 aa14.61□□□□□ -0.07
CASC4-202ENST00000345795 MMTAG2Q9BU76 263 aaKnown RBP14.61□□□□□ -0.07
CASC4-202ENST00000345795 OGFRQ9NZT2 677 aa14.61□□□□□ -0.07
CASC4-202ENST00000345795 MKRN1Q9UHC7 482 aaKnown RBP14.61□□□□□ -0.07
CASC4-202ENST00000345795 SEPT9Q9UHD8 586 aaPredicted RBP14.61□□□□□ -0.07
CASC4-202ENST00000345795 MSH4O15457 936 aa14.61□□□□□ -0.07
CASC4-202ENST00000345795 RRP1BQ14684 758 aaKnown RBP14.61□□□□□ -0.07
CASC4-202ENST00000345795 EPC2Q52LR7 807 aa14.61□□□□□ -0.07
CASC4-202ENST00000345795 HHIPL2Q6UWX4 724 aa14.61□□□□□ -0.07
CASC4-202ENST00000345795 DPH5Q9H2P9 285 aa14.61□□□□□ -0.07
CASC4-202ENST00000345795 ABCB6Q9NP58 842 aa14.61□□□□□ -0.07
CASC4-202ENST00000345795 CNOT7Q9UIV1 285 aaKnown RBP14.61□□□□□ -0.07
CASC4-202ENST00000345795 USTQ9Y2C2 406 aa14.61□□□□□ -0.07
CASC4-202ENST00000345795 MRPL11Q9Y3B7 192 aaKnown RBP14.61□□□□□ -0.07
CASC4-202ENST00000345795 LAD1O00515 517 aa14.6□□□□□ -0.07
CASC4-202ENST00000345795 SNRNP48Q6IEG0 339 aaKnown RBP14.6□□□□□ -0.07
CASC4-202ENST00000345795 TTI2Q6NXR4 508 aa14.6□□□□□ -0.07
CASC4-202ENST00000345795 RSBN1LQ6PCB5 846 aaPredicted RBP14.6□□□□□ -0.07
CASC4-202ENST00000345795 DAAM2Q86T65 1068 aa14.6□□□□□ -0.07
CASC4-202ENST00000345795 CCDC50Q8IVM0 306 aa14.6□□□□□ -0.07
CASC4-202ENST00000345795 FAM186BQ8IYM0 893 aa14.6□□□□□ -0.07
CASC4-202ENST00000345795 GLG1Q92896 1179 aa14.6□□□□□ -0.07
CASC4-202ENST00000345795 ATRNO75882 1429 aa14.6□□□□□ -0.07
CASC4-202ENST00000345795 RHOBTB3O94955 611 aa14.6□□□□□ -0.07
CASC4-202ENST00000345795 CAPN2P17655 700 aa14.6□□□□□ -0.07
CASC4-202ENST00000345795 RPL13P26373 211 aaKnown RBP14.6□□□□□ -0.07
CASC4-202ENST00000345795 SLFN12Q8IYM2 578 aa14.6□□□□□ -0.07
CASC4-202ENST00000345795 METTL13Q8N6R0 699 aa14.6□□□□□ -0.07
CASC4-202ENST00000345795 BBXQ8WY36 941 aaPredicted RBP14.6□□□□□ -0.07
CASC4-202ENST00000345795 HAS1Q92839 578 aa14.6□□□□□ -0.07
CASC4-202ENST00000345795 ZDHHC15Q96MV8 337 aa14.6□□□□□ -0.07
CASC4-202ENST00000345795 DUSP9Q99956 384 aaKnown RBP14.6□□□□□ -0.07
CASC4-202ENST00000345795 RIOX1Q9H6W3 641 aa14.6□□□□□ -0.07
CASC4-202ENST00000345795 KBTBD4Q9NVX7 518 aa14.6□□□□□ -0.07
CASC4-202ENST00000345795 EIF3JO75822 258 aaKnown RBP14.6□□□□□ -0.07
CASC4-202ENST00000345795 CALCAP01258 141 aa14.6□□□□□ -0.07
CASC4-202ENST00000345795 TNNI1P19237 187 aa14.6□□□□□ -0.07
CASC4-202ENST00000345795 GMPSP49915 693 aaPredicted RBP14.6□□□□□ -0.07
CASC4-202ENST00000345795 LONRF2Q1L5Z9 754 aa14.6□□□□□ -0.07
Retrieved 100 of 20,778 RNA–protein pairs in 19.5 ms