RNA–Protein interactions for RNA: ENST00000345662.5

SPAST-202, Transcript of spastin, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene SPAST, Length 5,116 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPAST-202ENST00000345662 TTLL3Q9Y4R7 772 aa18.85■□□□□ 0.61
SPAST-202ENST00000345662 ERVV-2B6SEH9 535 aa18.85■□□□□ 0.61
SPAST-202ENST00000345662 RASA4BC9J798 803 aa18.85■□□□□ 0.61
SPAST-202ENST00000345662 RASA4O43374 803 aa18.85■□□□□ 0.61
SPAST-202ENST00000345662 JADE1Q6IE81 842 aa18.85■□□□□ 0.61
SPAST-202ENST00000345662 CNBD1Q8NA66 436 aa18.85■□□□□ 0.61
SPAST-202ENST00000345662 DNAJC17Q9NVM6 304 aaKnown RBP18.85■□□□□ 0.61
SPAST-202ENST00000345662 HPCAL4Q9UM19 191 aa18.85■□□□□ 0.61
SPAST-202ENST00000345662 ZBTB12Q9Y330 459 aaPredicted RBP18.85■□□□□ 0.61
SPAST-202ENST00000345662 IPO5O00410 1097 aaKnown RBP18.85■□□□□ 0.61
SPAST-202ENST00000345662 MAP7D3Q8IWC1 876 aa18.85■□□□□ 0.61
SPAST-202ENST00000345662 LRRC47Q8N1G4 583 aaKnown RBP18.85■□□□□ 0.61
SPAST-202ENST00000345662 DEPTORQ8TB45 409 aa18.85■□□□□ 0.61
SPAST-202ENST00000345662 MIS12Q9H081 205 aa18.85■□□□□ 0.61
SPAST-202ENST00000345662 GREM2Q9H772 168 aa18.85■□□□□ 0.61
SPAST-202ENST00000345662 ATP10AO60312 1499 aa18.84■□□□□ 0.61
SPAST-202ENST00000345662 ARHGEF5Q12774 1597 aa18.84■□□□□ 0.61
SPAST-202ENST00000345662 A0A1W2PQC6 194 aa18.84■□□□□ 0.61
SPAST-202ENST00000345662 CLIC2O15247 247 aa18.84■□□□□ 0.61
SPAST-202ENST00000345662 RANBP1P43487 201 aa18.84■□□□□ 0.61
SPAST-202ENST00000345662 LRRC1Q9BTT6 524 aa18.84■□□□□ 0.61
SPAST-202ENST00000345662 TRAIPQ9BWF2 469 aa18.84■□□□□ 0.61
SPAST-202ENST00000345662 CCDC87Q9NVE4 849 aa18.84■□□□□ 0.61
SPAST-202ENST00000345662 TRIM50Q86XT4 487 aa18.84■□□□□ 0.61
SPAST-202ENST00000345662 FGD4Q96M96 766 aa18.84■□□□□ 0.61
SPAST-202ENST00000345662 ANLNQ9NQW6 1124 aa18.84■□□□□ 0.61
SPAST-202ENST00000345662 H0YCG3 227 aa18.84■□□□□ 0.61
SPAST-202ENST00000345662 ZYXQ15942 572 aaKnown RBP18.84■□□□□ 0.61
SPAST-202ENST00000345662 SHC4Q6S5L8 630 aa18.84■□□□□ 0.61
SPAST-202ENST00000345662 CENPUQ71F23 418 aa18.84■□□□□ 0.61
SPAST-202ENST00000345662 MRPL46Q9H2W6 279 aaKnown RBP18.84■□□□□ 0.61
SPAST-202ENST00000345662 FOSP01100 380 aaPredicted RBP18.84■□□□□ 0.61
SPAST-202ENST00000345662 CCNI2Q6ZMN8 369 aaPredicted RBP18.84■□□□□ 0.61
SPAST-202ENST00000345662 RASGRP2Q7LDG7 609 aa18.84■□□□□ 0.61
SPAST-202ENST00000345662 RFX6Q8HWS3 928 aa18.84■□□□□ 0.61
SPAST-202ENST00000345662 HNRNPLLQ8WVV9 542 aaKnown RBP18.84■□□□□ 0.61
SPAST-202ENST00000345662 ATP7BP35670 1465 aa18.83■□□□□ 0.61
SPAST-202ENST00000345662 EPM2AIP1Q7L775 607 aaPredicted RBP18.83■□□□□ 0.61
SPAST-202ENST00000345662 DDX47Q9H0S4 455 aaKnown RBP18.83■□□□□ 0.61
SPAST-202ENST00000345662 L2HGDHQ9H9P8 463 aa18.83■□□□□ 0.61
SPAST-202ENST00000345662 MRPL47Q9HD33 250 aaKnown RBP18.83■□□□□ 0.61
SPAST-202ENST00000345662 IQANK1A0A1B0GTG1 560 aa18.83■□□□□ 0.6
SPAST-202ENST00000345662 GSTA1P08263 222 aa18.83■□□□□ 0.6
SPAST-202ENST00000345662 GSTA2P09210 222 aa18.83■□□□□ 0.6
SPAST-202ENST00000345662 PLA2G4AP47712 749 aa18.83■□□□□ 0.6
SPAST-202ENST00000345662 IRAK1P51617 712 aa18.83■□□□□ 0.6
SPAST-202ENST00000345662 PROCA1Q8NCQ7 364 aaPredicted RBP18.83■□□□□ 0.6
SPAST-202ENST00000345662 BUD13Q9BRD0 619 aaKnown RBP eCLIP18.83■□□□□ 0.67e-6■□□□□ 9.4
SPAST-202ENST00000345662 FBXL5Q9UKA1 691 aa18.83■□□□□ 0.6
SPAST-202ENST00000345662 TOM1L1O75674 476 aa18.83■□□□□ 0.6
SPAST-202ENST00000345662 XKR9Q5GH70 373 aa18.83■□□□□ 0.6
SPAST-202ENST00000345662 SRRM1Q8IYB3 904 aaKnown RBP18.83■□□□□ 0.6
SPAST-202ENST00000345662 NUDCD1Q96RS6 583 aa18.83■□□□□ 0.6
SPAST-202ENST00000345662 TEKT3Q9BXF9 490 aa18.83■□□□□ 0.6
SPAST-202ENST00000345662 UBE2TQ9NPD8 197 aaPredicted RBP18.83■□□□□ 0.6
SPAST-202ENST00000345662 SNX12Q9UMY4 172 aa18.83■□□□□ 0.6
SPAST-202ENST00000345662 KRT1P04264 644 aa18.83■□□□□ 0.6
SPAST-202ENST00000345662 RPS8P62241 208 aaKnown RBP18.83■□□□□ 0.6
SPAST-202ENST00000345662 CDR2Q01850 454 aa18.83■□□□□ 0.6
SPAST-202ENST00000345662 PPP1R2P3Q6NXS1 205 aa18.83■□□□□ 0.6
SPAST-202ENST00000345662 PI16Q6UXB8 463 aa18.83■□□□□ 0.6
SPAST-202ENST00000345662 NLRX1Q86UT6 975 aa18.83■□□□□ 0.6
SPAST-202ENST00000345662 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP18.83■□□□□ 0.6
SPAST-202ENST00000345662 ZMAT2Q96NC0 199 aaKnown RBP18.83■□□□□ 0.6
SPAST-202ENST00000345662 OLFM3Q96PB7 478 aa18.83■□□□□ 0.6
SPAST-202ENST00000345662 SLITRK6Q9H5Y7 841 aa18.83■□□□□ 0.6
SPAST-202ENST00000345662 WDR19Q8NEZ3 1342 aa18.82■□□□□ 0.6
SPAST-202ENST00000345662 PRKAB2O43741 272 aa18.82■□□□□ 0.6
SPAST-202ENST00000345662 CPP00450 1065 aa18.82■□□□□ 0.6
SPAST-202ENST00000345662 DDIT3P35638 169 aa18.82■□□□□ 0.6
SPAST-202ENST00000345662 CPXCR1Q8N123 301 aa18.82■□□□□ 0.6
SPAST-202ENST00000345662 SH2D3CQ8N5H7 860 aa18.82■□□□□ 0.6
SPAST-202ENST00000345662 TGS1Q96RS0 853 aaKnown RBP18.82■□□□□ 0.6
SPAST-202ENST00000345662 HAUS5O94927 633 aa18.82■□□□□ 0.6
SPAST-202ENST00000345662 HNRNPH1P31943 449 aaKnown RBP18.82■□□□□ 0.6
SPAST-202ENST00000345662 FBXO11Q86XK2 927 aa18.82■□□□□ 0.6
SPAST-202ENST00000345662 PCDHA1Q9Y5I3 950 aa18.82■□□□□ 0.6
SPAST-202ENST00000345662 EIF4E1BA6NMX2 242 aaKnown RBP18.82■□□□□ 0.6
SPAST-202ENST00000345662 hCG_1984214I3L0E3 225 aa18.82■□□□□ 0.6
SPAST-202ENST00000345662 BRAFP15056 766 aa18.82■□□□□ 0.6
SPAST-202ENST00000345662 ZNF713Q8N859 430 aaPredicted RBP18.82■□□□□ 0.6
SPAST-202ENST00000345662 PYROXD1Q8WU10 500 aa18.82■□□□□ 0.6
SPAST-202ENST00000345662 IL17RAQ96F46 866 aa18.82■□□□□ 0.6
SPAST-202ENST00000345662 A0A1B0GTH6 734 aa18.82■□□□□ 0.6
SPAST-202ENST00000345662 SAT1P21673 171 aa18.82■□□□□ 0.6
SPAST-202ENST00000345662 NSMFQ6X4W1 530 aa18.82■□□□□ 0.6
SPAST-202ENST00000345662 UNC13DQ70J99 1090 aa18.82■□□□□ 0.6
SPAST-202ENST00000345662 PPIL4Q8WUA2 492 aaKnown RBP eCLIP18.82■□□□□ 0.6
SPAST-202ENST00000345662 RIN2Q8WYP3 895 aaPredicted RBP18.82■□□□□ 0.6
SPAST-202ENST00000345662 FAM81BQ96LP2 452 aa18.82■□□□□ 0.6
SPAST-202ENST00000345662 PPARGC1AQ9UBK2 798 aaKnown RBP18.82■□□□□ 0.6
SPAST-202ENST00000345662 CAPN11Q9UMQ6 739 aa18.82■□□□□ 0.6
SPAST-202ENST00000345662 TMOD1P28289 359 aa18.81■□□□□ 0.6
SPAST-202ENST00000345662 BASP1P80723 227 aaKnown RBP18.81■□□□□ 0.6
SPAST-202ENST00000345662 DPP8Q6V1X1 898 aaPredicted RBP18.81■□□□□ 0.6
SPAST-202ENST00000345662 LCORLQ8N3X6 602 aa18.81■□□□□ 0.6
SPAST-202ENST00000345662 GRAMD1AQ96CP6 724 aa18.81■□□□□ 0.6
SPAST-202ENST00000345662 DMP1Q13316 513 aaPredicted RBP18.81■□□□□ 0.6
SPAST-202ENST00000345662 TSGA10IPQ3SY00 556 aa18.81■□□□□ 0.6
SPAST-202ENST00000345662 CDK12Q9NYV4 1490 aaPredicted RBP18.81■□□□□ 0.6
Retrieved 100 of 20,778 RNA–protein pairs in 36.2 ms