RNA–Protein interactions for RNA: ENST00000345009.8

SNCA-202, Transcript of synuclein alpha, humanhuman

TSL 1 (best) BASIC

Gene SNCA, Length 1,096 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Synapse .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNCA-202ENST00000345009 COPS5Q92905 334 aa13.4□□□□□ -0.26
SNCA-202ENST00000345009 FAM20AQ96MK3 541 aa13.4□□□□□ -0.26
SNCA-202ENST00000345009 RIT2Q99578 217 aa13.4□□□□□ -0.26
SNCA-202ENST00000345009 SEZ6LQ9BYH1 1024 aa13.4□□□□□ -0.26
SNCA-202ENST00000345009 C11orf49Q9H6J7 331 aa13.4□□□□□ -0.26
SNCA-202ENST00000345009 JPH1Q9HDC5 661 aaPredicted RBP13.4□□□□□ -0.26
SNCA-202ENST00000345009 KIAA1217Q5T5P2 1943 aa13.4□□□□□ -0.26
SNCA-202ENST00000345009 BRCA2P51587 3418 aa13.39□□□□□ -0.27
SNCA-202ENST00000345009 IGLV3-22A0A075B6J6 115 aa13.39□□□□□ -0.27
SNCA-202ENST00000345009 TBX3O15119 743 aa13.39□□□□□ -0.27
SNCA-202ENST00000345009 STX6O43752 255 aa13.39□□□□□ -0.27
SNCA-202ENST00000345009 GAS7O60861 476 aa13.39□□□□□ -0.27
SNCA-202ENST00000345009 ATP9AO75110 1047 aa13.39□□□□□ -0.27
SNCA-202ENST00000345009 ASGR1P07306 291 aa13.39□□□□□ -0.27
SNCA-202ENST00000345009 KCNA2P16389 499 aa13.39□□□□□ -0.27
SNCA-202ENST00000345009 ATP2B1P20020 1258 aa13.39□□□□□ -0.27
SNCA-202ENST00000345009 EMP3P54852 163 aa13.39□□□□□ -0.27
SNCA-202ENST00000345009 BEX3Q00994 111 aa13.39□□□□□ -0.27
SNCA-202ENST00000345009 SEMA3FQ13275 785 aa13.39□□□□□ -0.27
SNCA-202ENST00000345009 RILPL1Q5EBL4 403 aa13.39□□□□□ -0.27
SNCA-202ENST00000345009 TMEM63BQ5T3F8 832 aa13.39□□□□□ -0.27
SNCA-202ENST00000345009 PLPP6Q8IY26 295 aa13.39□□□□□ -0.27
SNCA-202ENST00000345009 SLFN12Q8IYM2 578 aa13.39□□□□□ -0.27
SNCA-202ENST00000345009 SEPT1Q8WYJ6 367 aa13.39□□□□□ -0.27
SNCA-202ENST00000345009 PAWRQ96IZ0 340 aaKnown RBP13.39□□□□□ -0.27
SNCA-202ENST00000345009 MBOAT7Q96N66 472 aa13.39□□□□□ -0.27
SNCA-202ENST00000345009 MTG1Q9BT17 334 aaPredicted RBP13.39□□□□□ -0.27
SNCA-202ENST00000345009 HTATIP2Q9BUP3 242 aa13.39□□□□□ -0.27
SNCA-202ENST00000345009 SENP6Q9GZR1 1112 aaPredicted RBP13.39□□□□□ -0.27
SNCA-202ENST00000345009 PKD2L1Q9P0L9 805 aa13.39□□□□□ -0.27
SNCA-202ENST00000345009 SLC9A2Q9UBY0 812 aa13.39□□□□□ -0.27
SNCA-202ENST00000345009 PHF24Q9UPV7 400 aa13.39□□□□□ -0.27
SNCA-202ENST00000345009 ELP1O95163 1332 aa13.39□□□□□ -0.27
SNCA-202ENST00000345009 NEMFO60524 1076 aa13.38□□□□□ -0.27
SNCA-202ENST00000345009 TDP2O95551 362 aa13.38□□□□□ -0.27
SNCA-202ENST00000345009 MYL3P08590 195 aa13.38□□□□□ -0.27
SNCA-202ENST00000345009 KRT76Q01546 638 aa13.38□□□□□ -0.27
SNCA-202ENST00000345009 LRCH2Q5VUJ6 765 aa13.38□□□□□ -0.27
SNCA-202ENST00000345009 CCSAPQ6IQ19 270 aaPredicted RBP13.38□□□□□ -0.27
SNCA-202ENST00000345009 TNPO1Q92973 898 aaKnown RBP13.38□□□□□ -0.27
SNCA-202ENST00000345009 KATNAL1Q9BW62 490 aa13.38□□□□□ -0.27
SNCA-202ENST00000345009 TEKT3Q9BXF9 490 aa13.38□□□□□ -0.27
SNCA-202ENST00000345009 ZSCAN16Q9H4T2 348 aaPredicted RBP13.38□□□□□ -0.27
SNCA-202ENST00000345009 AZI2Q9H6S1 392 aa13.38□□□□□ -0.27
SNCA-202ENST00000345009 STARD7Q9NQZ5 370 aa13.38□□□□□ -0.27
SNCA-202ENST00000345009 MYH7BA7E2Y1 1941 aa13.37□□□□□ -0.27
SNCA-202ENST00000345009 MSH4O15457 936 aa13.37□□□□□ -0.27
SNCA-202ENST00000345009 SORBS3O60504 671 aa13.37□□□□□ -0.27
SNCA-202ENST00000345009 MMP3P08254 477 aa13.37□□□□□ -0.27
SNCA-202ENST00000345009 SP4Q02446 784 aa13.37□□□□□ -0.27
SNCA-202ENST00000345009 DSG2Q14126 1118 aa13.37□□□□□ -0.27
SNCA-202ENST00000345009 CALCRLQ16602 461 aa13.37□□□□□ -0.27
SNCA-202ENST00000345009 HSDL1Q3SXM5 330 aa13.37□□□□□ -0.27
SNCA-202ENST00000345009 EARS2Q5JPH6 523 aaKnown RBP13.37□□□□□ -0.27
SNCA-202ENST00000345009 TTC38Q5R3I4 469 aa13.37□□□□□ -0.27
SNCA-202ENST00000345009 ZNF746Q6NUN9 644 aaPredicted RBP13.37□□□□□ -0.27
SNCA-202ENST00000345009 SMAP1Q8IYB5 467 aaPredicted RBP13.37□□□□□ -0.27
SNCA-202ENST00000345009 SLC5A5Q92911 643 aa13.37□□□□□ -0.27
SNCA-202ENST00000345009 FERMT2Q96AC1 680 aa13.37□□□□□ -0.27
SNCA-202ENST00000345009 LENG9Q96B70 501 aa13.37□□□□□ -0.27
SNCA-202ENST00000345009 GPR20Q99678 358 aa13.37□□□□□ -0.27
SNCA-202ENST00000345009 ZNF215Q9UL58 517 aaPredicted RBP13.37□□□□□ -0.27
SNCA-202ENST00000345009 SAMM50Q9Y512 469 aa13.37□□□□□ -0.27
SNCA-202ENST00000345009 DNAH12Q6ZR08 3092 aa13.36□□□□□ -0.27
SNCA-202ENST00000345009 A0A1W2PQ45 241 aaPredicted RBP13.36□□□□□ -0.27
SNCA-202ENST00000345009 A0A1W2PQY0 241 aa13.36□□□□□ -0.27
SNCA-202ENST00000345009 MYADML2A6NDP7 307 aa13.36□□□□□ -0.27
SNCA-202ENST00000345009 FAM205CA6NFA0 338 aa13.36□□□□□ -0.27
SNCA-202ENST00000345009 LAD1O00515 517 aa13.36□□□□□ -0.27
SNCA-202ENST00000345009 CTAGE5O15320 804 aa13.36□□□□□ -0.27
SNCA-202ENST00000345009 COL6A1P12109 1028 aa13.36□□□□□ -0.27
SNCA-202ENST00000345009 SFNP31947 248 aa13.36□□□□□ -0.27
SNCA-202ENST00000345009 MCM7P33993 719 aa13.36□□□□□ -0.27
SNCA-202ENST00000345009 FOXK1P85037 733 aa13.36□□□□□ -0.27
SNCA-202ENST00000345009 PURAQ00577 322 aaKnown RBP13.36□□□□□ -0.27
SNCA-202ENST00000345009 ITGB3BPQ13352 177 aaPredicted RBP13.36□□□□□ -0.27
SNCA-202ENST00000345009 MIS18BP1Q6P0N0 1132 aa13.36□□□□□ -0.27
SNCA-202ENST00000345009 CXCL17Q6UXB2 119 aa13.36□□□□□ -0.27
SNCA-202ENST00000345009 GLG1Q92896 1179 aa13.36□□□□□ -0.27
SNCA-202ENST00000345009 SMARCAD1Q9H4L7 1026 aa13.36□□□□□ -0.27
SNCA-202ENST00000345009 CEP131Q9UPN4 1083 aa13.36□□□□□ -0.27
SNCA-202ENST00000345009 MROH7Q68CQ1 1323 aa13.36□□□□□ -0.27
SNCA-202ENST00000345009 A0A0U1RQG5 324 aaPredicted RBP13.35□□□□□ -0.27
SNCA-202ENST00000345009 WDR64B1ANS9 1081 aa13.35□□□□□ -0.27
SNCA-202ENST00000345009 KIF28PB7ZC32 967 aa13.35□□□□□ -0.27
SNCA-202ENST00000345009 H3BRB1 525 aa13.35□□□□□ -0.27
SNCA-202ENST00000345009 DDX39AO00148 427 aaKnown RBP13.35□□□□□ -0.27
SNCA-202ENST00000345009 BACH1O14867 736 aa13.35□□□□□ -0.27
SNCA-202ENST00000345009 DHX15O43143 795 aaKnown RBP13.35□□□□□ -0.27
SNCA-202ENST00000345009 EDIL3O43854 480 aa13.35□□□□□ -0.27
SNCA-202ENST00000345009 BMP15O95972 392 aa13.35□□□□□ -0.27
SNCA-202ENST00000345009 PSAPP07602 524 aa13.35□□□□□ -0.27
SNCA-202ENST00000345009 HOXD8P13378 290 aaPredicted RBP13.35□□□□□ -0.27
SNCA-202ENST00000345009 TCF7P36402 384 aaPredicted RBP13.35□□□□□ -0.27
SNCA-202ENST00000345009 RGS19P49795 217 aa13.35□□□□□ -0.27
SNCA-202ENST00000345009 SLC26A2P50443 739 aa13.35□□□□□ -0.27
SNCA-202ENST00000345009 JAK3P52333 1124 aa13.35□□□□□ -0.27
SNCA-202ENST00000345009 ACTR2P61160 394 aa13.35□□□□□ -0.27
SNCA-202ENST00000345009 ZNF174Q15697 407 aa13.35□□□□□ -0.27
SNCA-202ENST00000345009 TMEM266Q2M3C6 531 aa13.35□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 20.6 ms