RNA–Protein interactions for RNA: ENST00000344114.8

HERPUD1-202, Transcript of homocysteine inducible ER protein with ubiquitin like domain 1, humanhuman

TSL 1 (best) BASIC

Gene HERPUD1, Length 1,388 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERPUD1-202ENST00000344114 SNW1Q13573 536 aaKnown RBP15.28■□□□□ 0.04
HERPUD1-202ENST00000344114 FSCN1Q16658 493 aaKnown RBP15.28■□□□□ 0.04
HERPUD1-202ENST00000344114 CCDC96Q2M329 555 aa15.28■□□□□ 0.04
HERPUD1-202ENST00000344114 PPP2R2DQ66LE6 453 aa15.28■□□□□ 0.04
HERPUD1-202ENST00000344114 RPUSD2Q8IZ73 545 aaKnown RBP15.28■□□□□ 0.04
HERPUD1-202ENST00000344114 FMR1NBQ8N0W7 255 aaPredicted RBP15.28■□□□□ 0.04
HERPUD1-202ENST00000344114 KRI1Q8N9T8 703 aaKnown RBP15.28■□□□□ 0.04
HERPUD1-202ENST00000344114 FAM122AQ96E09 287 aa15.28■□□□□ 0.04
HERPUD1-202ENST00000344114 AGBL1Q96MI9 1066 aa15.28■□□□□ 0.04
HERPUD1-202ENST00000344114 FUCA2Q9BTY2 467 aa15.28■□□□□ 0.04
HERPUD1-202ENST00000344114 ZMYND12Q9H0C1 365 aa15.28■□□□□ 0.04
HERPUD1-202ENST00000344114 HOMER2Q9NSB8 354 aa15.28■□□□□ 0.04
HERPUD1-202ENST00000344114 Q9Y3F1 56 aa15.28■□□□□ 0.04
HERPUD1-202ENST00000344114 SLC4A7Q9Y6M7 1214 aa15.28■□□□□ 0.04
HERPUD1-202ENST00000344114 XIRP2A4UGR9 3374 aa15.28■□□□□ 0.04
HERPUD1-202ENST00000344114 ZEB2O60315 1214 aa15.27■□□□□ 0.04
HERPUD1-202ENST00000344114 CCDC192P0DO97 292 aa15.27■□□□□ 0.04
HERPUD1-202ENST00000344114 BMP3P12645 472 aa15.27■□□□□ 0.04
HERPUD1-202ENST00000344114 SMPD1P17405 629 aa15.27■□□□□ 0.04
HERPUD1-202ENST00000344114 MARCKSP29966 332 aaPredicted RBP15.27■□□□□ 0.04
HERPUD1-202ENST00000344114 GNA11P29992 359 aa15.27■□□□□ 0.04
HERPUD1-202ENST00000344114 TTC38Q5R3I4 469 aa15.27■□□□□ 0.04
HERPUD1-202ENST00000344114 NECAB3Q96P71 396 aaPredicted RBP15.27■□□□□ 0.04
HERPUD1-202ENST00000344114 PIGSQ96S52 555 aa15.27■□□□□ 0.04
HERPUD1-202ENST00000344114 C1QTNF1Q9BXJ1 281 aa15.27■□□□□ 0.04
HERPUD1-202ENST00000344114 TRPV6Q9H1D0 765 aa15.27■□□□□ 0.04
HERPUD1-202ENST00000344114 RBSNQ9H1K0 784 aa15.27■□□□□ 0.04
HERPUD1-202ENST00000344114 PCDHB6Q9Y5E3 794 aa15.27■□□□□ 0.04
HERPUD1-202ENST00000344114 TANC1Q9C0D5 1861 aa15.27■□□□□ 0.04
HERPUD1-202ENST00000344114 FAM205CA6NFA0 338 aa15.26■□□□□ 0.03
HERPUD1-202ENST00000344114 M0R2N6 131 aa15.26■□□□□ 0.03
HERPUD1-202ENST00000344114 MYOGP15173 224 aa15.26■□□□□ 0.03
HERPUD1-202ENST00000344114 PTGS1P23219 599 aa15.26■□□□□ 0.03
HERPUD1-202ENST00000344114 STAT2P52630 851 aa15.26■□□□□ 0.03
HERPUD1-202ENST00000344114 TFF2Q03403 129 aa15.26■□□□□ 0.03
HERPUD1-202ENST00000344114 AAK1Q2M2I8 961 aa15.26■□□□□ 0.03
HERPUD1-202ENST00000344114 TKFCQ3LXA3 575 aa15.26■□□□□ 0.03
HERPUD1-202ENST00000344114 RESP18Q5W5W9 173 aa15.26■□□□□ 0.03
HERPUD1-202ENST00000344114 SLFN13Q68D06 897 aa15.26■□□□□ 0.03
HERPUD1-202ENST00000344114 IQSEC1Q6DN90 963 aa15.26■□□□□ 0.03
HERPUD1-202ENST00000344114 TYW1BQ6NUM6 668 aa15.26■□□□□ 0.03
HERPUD1-202ENST00000344114 TAPT1Q6NXT6 567 aa15.26■□□□□ 0.03
HERPUD1-202ENST00000344114 HOMER1Q86YM7 354 aa15.26■□□□□ 0.03
HERPUD1-202ENST00000344114 ZNF579Q8NAF0 562 aaKnown RBP15.26■□□□□ 0.03
HERPUD1-202ENST00000344114 GMCL1Q96IK5 515 aa15.26■□□□□ 0.03
HERPUD1-202ENST00000344114 AP5M1Q9H0R1 490 aa15.26■□□□□ 0.03
HERPUD1-202ENST00000344114 CPVLQ9H3G5 476 aa15.26■□□□□ 0.03
HERPUD1-202ENST00000344114 C6orf50Q9HD87 102 aa15.26■□□□□ 0.03
HERPUD1-202ENST00000344114 GPCPD1Q9NPB8 672 aa15.26■□□□□ 0.03
HERPUD1-202ENST00000344114 RNF146Q9NTX7 359 aa15.26■□□□□ 0.03
HERPUD1-202ENST00000344114 TRANK1O15050 2925 aa15.26■□□□□ 0.03
HERPUD1-202ENST00000344114 PNMA6FA0A0J9YX94 578 aa15.25■□□□□ 0.03
HERPUD1-202ENST00000344114 CCDC194A0A1B0GVG4 234 aa15.25■□□□□ 0.03
HERPUD1-202ENST00000344114 A0A1B0GVL5 298 aa15.25■□□□□ 0.03
HERPUD1-202ENST00000344114 TMEM232C9JQI7 657 aa15.25■□□□□ 0.03
HERPUD1-202ENST00000344114 DYNC1LI2O43237 492 aaPredicted RBP15.25■□□□□ 0.03
HERPUD1-202ENST00000344114 PFKMP08237 780 aa15.25■□□□□ 0.03
HERPUD1-202ENST00000344114 PFKFB1P16118 471 aa15.25■□□□□ 0.03
HERPUD1-202ENST00000344114 ATP2A2P16615 1042 aaKnown RBP15.25■□□□□ 0.03
HERPUD1-202ENST00000344114 SLC1A4P43007 532 aa15.25■□□□□ 0.03
HERPUD1-202ENST00000344114 NDUFA8P51970 172 aa15.25■□□□□ 0.03
HERPUD1-202ENST00000344114 PSMC6P62333 389 aa15.25■□□□□ 0.03
HERPUD1-202ENST00000344114 CAMK4Q16566 473 aa15.25■□□□□ 0.03
HERPUD1-202ENST00000344114 EARS2Q5JPH6 523 aaKnown RBP15.25■□□□□ 0.03
HERPUD1-202ENST00000344114 PIK3AP1Q6ZUJ8 805 aa15.25■□□□□ 0.03
HERPUD1-202ENST00000344114 KRT25Q7Z3Z0 450 aa15.25■□□□□ 0.03
HERPUD1-202ENST00000344114 FAM160B2Q86V87 743 aa15.25■□□□□ 0.03
HERPUD1-202ENST00000344114 ADGRF4Q8IZF3 695 aa15.25■□□□□ 0.03
HERPUD1-202ENST00000344114 MICALL1Q8N3F8 863 aa15.25■□□□□ 0.03
HERPUD1-202ENST00000344114 MORC4Q8TE76 937 aa15.25■□□□□ 0.03
HERPUD1-202ENST00000344114 ANP32BQ92688 251 aaKnown RBP15.25■□□□□ 0.03
HERPUD1-202ENST00000344114 MTMR8Q96EF0 704 aa15.25■□□□□ 0.03
HERPUD1-202ENST00000344114 SCLYQ96I15 445 aa15.25■□□□□ 0.03
HERPUD1-202ENST00000344114 TIGD1Q96MW7 591 aa15.25■□□□□ 0.03
HERPUD1-202ENST00000344114 UBA5Q9GZZ9 404 aa15.25■□□□□ 0.03
HERPUD1-202ENST00000344114 PDGFCQ9NRA1 345 aa15.25■□□□□ 0.03
HERPUD1-202ENST00000344114 FBXO2Q9UK22 296 aaPredicted RBP15.25■□□□□ 0.03
HERPUD1-202ENST00000344114 HPSEQ9Y251 543 aa15.25■□□□□ 0.03
HERPUD1-202ENST00000344114 SRPRBQ9Y5M8 271 aaKnown RBP15.25■□□□□ 0.03
HERPUD1-202ENST00000344114 MTCH2Q9Y6C9 303 aa15.25■□□□□ 0.03
HERPUD1-202ENST00000344114 SCN10AQ9Y5Y9 1956 aa15.25■□□□□ 0.03
HERPUD1-202ENST00000344114 PLA2G6O60733 806 aa15.24■□□□□ 0.03
HERPUD1-202ENST00000344114 HOXD11P31277 338 aaPredicted RBP15.24■□□□□ 0.03
HERPUD1-202ENST00000344114 KCNQ1P51787 676 aa15.24■□□□□ 0.03
HERPUD1-202ENST00000344114 TMEM63BQ5T3F8 832 aa15.24■□□□□ 0.03
HERPUD1-202ENST00000344114 CHURC1Q8WUH1 139 aa15.24■□□□□ 0.03
HERPUD1-202ENST00000344114 TRERF1Q96PN7 1200 aa15.24■□□□□ 0.03
HERPUD1-202ENST00000344114 JMJD4Q9H9V9 463 aa15.24■□□□□ 0.03
HERPUD1-202ENST00000344114 VAT1LQ9HCJ6 419 aa15.24■□□□□ 0.03
HERPUD1-202ENST00000344114 PCDHA6Q9UN73 950 aa15.24■□□□□ 0.03
HERPUD1-202ENST00000344114 ARIH1Q9Y4X5 557 aaPredicted RBP15.24■□□□□ 0.03
HERPUD1-202ENST00000344114 PCDHA8Q9Y5H6 950 aa15.24■□□□□ 0.03
HERPUD1-202ENST00000344114 PTPRSQ13332 1948 aa15.24■□□□□ 0.03
HERPUD1-202ENST00000344114 PRRC2BQ5JSZ5 2229 aaKnown RBP15.24■□□□□ 0.03
HERPUD1-202ENST00000344114 SMCO2A6NFE2 343 aa15.24■□□□□ 0.03
HERPUD1-202ENST00000344114 ZBBXA8MT70 800 aa15.24■□□□□ 0.03
HERPUD1-202ENST00000344114 ZBTB5O15062 677 aa15.24■□□□□ 0.03
HERPUD1-202ENST00000344114 SYKP43405 635 aa15.24■□□□□ 0.03
HERPUD1-202ENST00000344114 ATP2C1P98194 919 aaPredicted RBP15.24■□□□□ 0.03
HERPUD1-202ENST00000344114 TYRO3Q06418 890 aa15.24■□□□□ 0.03
Retrieved 100 of 20,778 RNA–protein pairs in 23.9 ms