RNA–Protein interactions for RNA: ENST00000343765.6

VIPAS39-202, Transcript of VPS33B interacting protein, apical-basolateral polarity regulator, spe-39 homolog, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VIPAS39, Length 2,761 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VIPAS39-202ENST00000343765 ADAM9Q13443 819 aa16.44■□□□□ 0.22
VIPAS39-202ENST00000343765 PKNOX2Q96KN3 472 aa16.44■□□□□ 0.22
VIPAS39-202ENST00000343765 MBOAT7Q96N66 472 aa16.44■□□□□ 0.22
VIPAS39-202ENST00000343765 KCTD10Q9H3F6 313 aa16.44■□□□□ 0.22
VIPAS39-202ENST00000343765 SH2D4AQ9H788 454 aa16.44■□□□□ 0.22
VIPAS39-202ENST00000343765 DNM3Q9UQ16 869 aa16.44■□□□□ 0.22
VIPAS39-202ENST00000343765 YDJCA8MPS7 323 aa16.44■□□□□ 0.22
VIPAS39-202ENST00000343765 MSH4O15457 936 aa16.44■□□□□ 0.22
VIPAS39-202ENST00000343765 KIF20AO95235 890 aa16.44■□□□□ 0.22
VIPAS39-202ENST00000343765 MAGEA1P43355 309 aa16.44■□□□□ 0.22
VIPAS39-202ENST00000343765 UBXN2AP68543 259 aa16.44■□□□□ 0.22
VIPAS39-202ENST00000343765 C2orf54Q08AI8 447 aa16.44■□□□□ 0.22
VIPAS39-202ENST00000343765 ZYXQ15942 572 aaKnown RBP16.44■□□□□ 0.22
VIPAS39-202ENST00000343765 STYK1Q6J9G0 422 aa16.44■□□□□ 0.22
VIPAS39-202ENST00000343765 HDXQ7Z353 690 aa16.44■□□□□ 0.22
VIPAS39-202ENST00000343765 SFR1Q86XK3 245 aa16.44■□□□□ 0.22
VIPAS39-202ENST00000343765 ERMNQ8TAM6 284 aa16.44■□□□□ 0.22
VIPAS39-202ENST00000343765 HNRNPLLQ8WVV9 542 aaKnown RBP16.44■□□□□ 0.22
VIPAS39-202ENST00000343765 CRYGNQ8WXF5 182 aa16.44■□□□□ 0.22
VIPAS39-202ENST00000343765 REEP2Q9BRK0 252 aa16.44■□□□□ 0.22
VIPAS39-202ENST00000343765 UBXN6Q9BZV1 441 aa16.44■□□□□ 0.22
VIPAS39-202ENST00000343765 XPO5Q9HAV4 1204 aaKnown RBP eCLIP16.44■□□□□ 0.22
VIPAS39-202ENST00000343765 PRR12Q9ULL5 1215 aa16.44■□□□□ 0.22
VIPAS39-202ENST00000343765 RSPH10B2B2RC85 870 aa16.43■□□□□ 0.22
VIPAS39-202ENST00000343765 MAP2K7O14733 419 aa16.43■□□□□ 0.22
VIPAS39-202ENST00000343765 TACC1O75410 805 aa16.43■□□□□ 0.22
VIPAS39-202ENST00000343765 RSPH10BP0C881 870 aa16.43■□□□□ 0.22
VIPAS39-202ENST00000343765 SPATA31C1P0DKV0 1188 aa16.43■□□□□ 0.22
VIPAS39-202ENST00000343765 NR2F2P24468 414 aa16.43■□□□□ 0.22
VIPAS39-202ENST00000343765 SREBF1P36956 1147 aa16.43■□□□□ 0.22
VIPAS39-202ENST00000343765 FKBP1AP62942 108 aaKnown RBP16.43■□□□□ 0.22
VIPAS39-202ENST00000343765 TUBB4BP68371 445 aa16.43■□□□□ 0.22
VIPAS39-202ENST00000343765 RASSF7Q02833 373 aa16.43■□□□□ 0.22
VIPAS39-202ENST00000343765 FAM83BQ5T0W9 1011 aa16.43■□□□□ 0.22
VIPAS39-202ENST00000343765 CCDC174Q6PII3 467 aa16.43■□□□□ 0.22
VIPAS39-202ENST00000343765 ACER1Q8TDN7 264 aa16.43■□□□□ 0.22
VIPAS39-202ENST00000343765 RGL1Q9NZL6 768 aa16.43■□□□□ 0.22
VIPAS39-202ENST00000343765 CHMP2AO43633 222 aa16.43■□□□□ 0.22
VIPAS39-202ENST00000343765 BUB1O43683 1085 aa16.43■□□□□ 0.22
VIPAS39-202ENST00000343765 C21orf2O43822 256 aa16.43■□□□□ 0.22
VIPAS39-202ENST00000343765 NOL4O94818 638 aa16.43■□□□□ 0.22
VIPAS39-202ENST00000343765 CFBP00751 764 aa16.43■□□□□ 0.22
VIPAS39-202ENST00000343765 CXCR5P32302 372 aa16.43■□□□□ 0.22
VIPAS39-202ENST00000343765 NAP1L1P55209 391 aaKnown RBP16.43■□□□□ 0.22
VIPAS39-202ENST00000343765 GIT2Q14161 759 aa16.43■□□□□ 0.22
VIPAS39-202ENST00000343765 KIAA1755Q5JYT7 1200 aa16.43■□□□□ 0.22
VIPAS39-202ENST00000343765 TBC1D5Q92609 795 aa16.43■□□□□ 0.22
VIPAS39-202ENST00000343765 CEP63Q96MT8 703 aa16.43■□□□□ 0.22
VIPAS39-202ENST00000343765 SALL4Q9UJQ4 1053 aa16.43■□□□□ 0.22
VIPAS39-202ENST00000343765 L1RE1Q9UN81 338 aa16.43■□□□□ 0.22
VIPAS39-202ENST00000343765 PRPF6O94906 941 aaKnown RBP16.43■□□□□ 0.22
VIPAS39-202ENST00000343765 MYBP10242 640 aa16.43■□□□□ 0.22
VIPAS39-202ENST00000343765 USP14P54578 494 aa16.43■□□□□ 0.22
VIPAS39-202ENST00000343765 CKAP4Q07065 602 aaKnown RBP16.43■□□□□ 0.22
VIPAS39-202ENST00000343765 Q4G0T1 1027 aa16.43■□□□□ 0.22
VIPAS39-202ENST00000343765 CC2D2BQ6DHV5 1058 aa16.43■□□□□ 0.22
VIPAS39-202ENST00000343765 TRIM59Q8IWR1 403 aa16.43■□□□□ 0.22
VIPAS39-202ENST00000343765 TRIM58Q8NG06 486 aa16.43■□□□□ 0.22
VIPAS39-202ENST00000343765 GDAP1L1Q96MZ0 367 aa16.43■□□□□ 0.22
VIPAS39-202ENST00000343765 BHMT2Q9H2M3 363 aa16.43■□□□□ 0.22
VIPAS39-202ENST00000343765 NCK2O43639 380 aa16.42■□□□□ 0.22
VIPAS39-202ENST00000343765 N4BP1O75113 896 aaKnown RBP16.42■□□□□ 0.22
VIPAS39-202ENST00000343765 RAPGEF1Q13905 1077 aa16.42■□□□□ 0.22
VIPAS39-202ENST00000343765 MOXD1Q6UVY6 613 aa16.42■□□□□ 0.22
VIPAS39-202ENST00000343765 GSPT2Q8IYD1 628 aaKnown RBP16.42■□□□□ 0.22
VIPAS39-202ENST00000343765 COG1Q8WTW3 980 aa16.42■□□□□ 0.22
VIPAS39-202ENST00000343765 SMARCAL1Q9NZC9 954 aa16.42■□□□□ 0.22
VIPAS39-202ENST00000343765 ANO9A1A5B4 782 aa16.42■□□□□ 0.22
VIPAS39-202ENST00000343765 SFI1A8K8P3 1242 aa16.42■□□□□ 0.22
VIPAS39-202ENST00000343765 EML1O00423 815 aa16.42■□□□□ 0.22
VIPAS39-202ENST00000343765 CETN3O15182 167 aa16.42■□□□□ 0.22
VIPAS39-202ENST00000343765 TLR2O60603 784 aa16.42■□□□□ 0.22
VIPAS39-202ENST00000343765 RAD17O75943 681 aa16.42■□□□□ 0.22
VIPAS39-202ENST00000343765 HMGB2P26583 209 aaKnown RBP16.42■□□□□ 0.22
VIPAS39-202ENST00000343765 RPA1P27694 616 aa16.42■□□□□ 0.22
VIPAS39-202ENST00000343765 DNA2P51530 1060 aa16.42■□□□□ 0.22
VIPAS39-202ENST00000343765 MRPS25P82663 173 aaKnown RBP16.42■□□□□ 0.22
VIPAS39-202ENST00000343765 SFMBT2Q5VUG0 894 aa16.42■□□□□ 0.22
VIPAS39-202ENST00000343765 HGSNATQ68CP4 663 aa16.42■□□□□ 0.22
VIPAS39-202ENST00000343765 NFRKBQ6P4R8 1299 aa16.42■□□□□ 0.22
VIPAS39-202ENST00000343765 PIGOQ8TEQ8 1089 aa16.42■□□□□ 0.22
VIPAS39-202ENST00000343765 CEP72Q9P209 647 aa16.42■□□□□ 0.22
VIPAS39-202ENST00000343765 ENTPD3O75355 529 aa16.41■□□□□ 0.22
VIPAS39-202ENST00000343765 TNNT3P45378 269 aaPredicted RBP16.41■□□□□ 0.22
VIPAS39-202ENST00000343765 STAT2P52630 851 aa16.41■□□□□ 0.22
VIPAS39-202ENST00000343765 CASP8Q14790 479 aa16.41■□□□□ 0.22
VIPAS39-202ENST00000343765 CNKSR1Q969H4 720 aa16.41■□□□□ 0.22
VIPAS39-202ENST00000343765 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP16.41■□□□□ 0.22
VIPAS39-202ENST00000343765 RUSC1Q9BVN2 902 aa16.41■□□□□ 0.22
VIPAS39-202ENST00000343765 JRKLQ9Y4A0 524 aa16.41■□□□□ 0.22
VIPAS39-202ENST00000343765 GNA14O95837 355 aa16.41■□□□□ 0.22
VIPAS39-202ENST00000343765 FOSP01100 380 aaPredicted RBP16.41■□□□□ 0.22
VIPAS39-202ENST00000343765 ACTN1P12814 892 aa16.41■□□□□ 0.22
VIPAS39-202ENST00000343765 MATR3P43243 847 aaKnown RBP eCLIP16.41■□□□□ 0.22
VIPAS39-202ENST00000343765 KCNH2Q12809 1159 aa16.41■□□□□ 0.22
VIPAS39-202ENST00000343765 CTTNQ14247 550 aaKnown RBP16.41■□□□□ 0.22
VIPAS39-202ENST00000343765 SLC9C1Q4G0N8 1177 aa16.41■□□□□ 0.22
VIPAS39-202ENST00000343765 FAM133AQ8N9E0 248 aa16.41■□□□□ 0.22
VIPAS39-202ENST00000343765 SYT2Q8N9I0 419 aaPredicted RBP16.41■□□□□ 0.22
VIPAS39-202ENST00000343765 EIF2AK1Q9BQI3 630 aaKnown RBP16.41■□□□□ 0.22
Retrieved 100 of 20,778 RNA–protein pairs in 16.6 ms