RNA–Protein interactions for RNA: ENST00000343253.11

CCDC18-201, Transcript of coiled-coil domain containing 18, humanhuman

APPRIS P2 TSL 5 BASIC

Gene CCDC18, Length 4,867 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC18-201ENST00000343253 SUCLA2Q9P2R7 463 aaPredicted RBP11.67□□□□□ -0.54
CCDC18-201ENST00000343253 WDR62O43379 1518 aa11.67□□□□□ -0.54
CCDC18-201ENST00000343253 GTPBP10A4D1E9 387 aaKnown RBP11.67□□□□□ -0.54
CCDC18-201ENST00000343253 CCDC22O60826 627 aa11.67□□□□□ -0.54
CCDC18-201ENST00000343253 ARFIP2P53365 341 aa11.67□□□□□ -0.54
CCDC18-201ENST00000343253 HDLBPQ00341 1268 aaKnown RBP11.67□□□□□ -0.54
CCDC18-201ENST00000343253 LRRC63Q05C16 580 aa11.67□□□□□ -0.54
CCDC18-201ENST00000343253 MED21Q13503 144 aa11.67□□□□□ -0.54
CCDC18-201ENST00000343253 RABGAP1LQ5R372 815 aa11.67□□□□□ -0.54
CCDC18-201ENST00000343253 TTC17Q96AE7 1141 aa11.67□□□□□ -0.54
CCDC18-201ENST00000343253 USP40Q9NVE5 1235 aa11.67□□□□□ -0.54
CCDC18-201ENST00000343253 TEKT2Q9UIF3 430 aa11.67□□□□□ -0.54
CCDC18-201ENST00000343253 MED23Q9ULK4 1368 aa11.67□□□□□ -0.54
CCDC18-201ENST00000343253 SPDYE16A6NNV3 312 aaPredicted RBP11.67□□□□□ -0.54
CCDC18-201ENST00000343253 NVLO15381 856 aaKnown RBP11.67□□□□□ -0.54
CCDC18-201ENST00000343253 KRT1P04264 644 aa11.67□□□□□ -0.54
CCDC18-201ENST00000343253 BRAFP15056 766 aa11.67□□□□□ -0.54
CCDC18-201ENST00000343253 TMOD1P28289 359 aa11.67□□□□□ -0.54
CCDC18-201ENST00000343253 SPDYE2Q495Y8 402 aa11.67□□□□□ -0.54
CCDC18-201ENST00000343253 ODR4Q5SWX8 454 aa11.67□□□□□ -0.54
CCDC18-201ENST00000343253 KRT39Q6A163 491 aa11.67□□□□□ -0.54
CCDC18-201ENST00000343253 ACAD11Q709F0 780 aa11.67□□□□□ -0.54
CCDC18-201ENST00000343253 BBS5Q8N3I7 341 aa11.67□□□□□ -0.54
CCDC18-201ENST00000343253 CHURC1Q8WUH1 139 aa11.67□□□□□ -0.54
CCDC18-201ENST00000343253 FTOQ9C0B1 505 aaKnown RBP eCLIP11.67□□□□□ -0.54
CCDC18-201ENST00000343253 USP44Q9H0E7 712 aa11.67□□□□□ -0.54
CCDC18-201ENST00000343253 TRPV6Q9H1D0 765 aa11.67□□□□□ -0.54
CCDC18-201ENST00000343253 ZNF229Q9UJW7 825 aa11.67□□□□□ -0.54
CCDC18-201ENST00000343253 G3BP2Q9UN86 482 aaKnown RBP11.67□□□□□ -0.54
CCDC18-201ENST00000343253 GINS2Q9Y248 185 aa11.67□□□□□ -0.54
CCDC18-201ENST00000343253 USP17L12C9JPN9 530 aa11.66□□□□□ -0.54
CCDC18-201ENST00000343253 KLRF2D3W0D1 207 aa11.66□□□□□ -0.54
CCDC18-201ENST00000343253 USP17L21D6R901 530 aa11.66□□□□□ -0.54
CCDC18-201ENST00000343253 KRT75O95678 551 aa11.66□□□□□ -0.54
CCDC18-201ENST00000343253 ESRRBO95718 433 aa11.66□□□□□ -0.54
CCDC18-201ENST00000343253 APOA5Q6Q788 366 aa11.66□□□□□ -0.54
CCDC18-201ENST00000343253 KRT26Q7Z3Y9 468 aa11.66□□□□□ -0.54
CCDC18-201ENST00000343253 VPS39Q96JC1 886 aa11.66□□□□□ -0.54
CCDC18-201ENST00000343253 ZKSCAN7Q9P0L1 754 aaPredicted RBP11.66□□□□□ -0.54
CCDC18-201ENST00000343253 ADAMTS1Q9UHI8 967 aa11.66□□□□□ -0.54
CCDC18-201ENST00000343253 NDUFB9Q9Y6M9 179 aa11.66□□□□□ -0.54
CCDC18-201ENST00000343253 H0Y626 953 aa11.66□□□□□ -0.54
CCDC18-201ENST00000343253 E2F6O75461 281 aa11.66□□□□□ -0.54
CCDC18-201ENST00000343253 TRIM16O95361 564 aa11.66□□□□□ -0.54
CCDC18-201ENST00000343253 CD2BP2O95400 341 aaKnown RBP11.66□□□□□ -0.54
CCDC18-201ENST00000343253 EPHB1P54762 984 aa11.66□□□□□ -0.54
CCDC18-201ENST00000343253 DAB2P98082 770 aa11.66□□□□□ -0.54
CCDC18-201ENST00000343253 MORF4L2Q15014 288 aa11.66□□□□□ -0.54
CCDC18-201ENST00000343253 SLC44A4Q53GD3 710 aa11.66□□□□□ -0.54
CCDC18-201ENST00000343253 NSMFQ6X4W1 530 aa11.66□□□□□ -0.54
CCDC18-201ENST00000343253 CADPS2Q86UW7 1296 aa11.66□□□□□ -0.54
CCDC18-201ENST00000343253 MB21D1Q8N884 522 aa11.66□□□□□ -0.54
CCDC18-201ENST00000343253 DDX25Q9UHL0 483 aaKnown RBP11.66□□□□□ -0.54
CCDC18-201ENST00000343253 SNX24Q9Y343 169 aa11.66□□□□□ -0.54
CCDC18-201ENST00000343253 KDM5BQ9UGL1 1544 aa11.66□□□□□ -0.54
CCDC18-201ENST00000343253 KDRP35968 1356 aa11.66□□□□□ -0.54
CCDC18-201ENST00000343253 ITSN2Q9NZM3 1697 aa11.66□□□□□ -0.54
CCDC18-201ENST00000343253 CCND1P24385 295 aa11.66□□□□□ -0.54
CCDC18-201ENST00000343253 ARL4CP56559 192 aa11.66□□□□□ -0.54
CCDC18-201ENST00000343253 PSMC1P62191 440 aaKnown RBP11.66□□□□□ -0.54
CCDC18-201ENST00000343253 RASSF3Q86WH2 238 aa11.66□□□□□ -0.54
CCDC18-201ENST00000343253 EDC3Q96F86 508 aaKnown RBP11.66□□□□□ -0.54
CCDC18-201ENST00000343253 TAF1DQ9H5J8 278 aaPredicted RBP11.66□□□□□ -0.54
CCDC18-201ENST00000343253 A0A1B0GW55 424 aa11.66□□□□□ -0.54
CCDC18-201ENST00000343253 GRID2IPA4D2P6 1211 aa11.66□□□□□ -0.54
CCDC18-201ENST00000343253 KPNA7A9QM74 516 aa11.66□□□□□ -0.54
CCDC18-201ENST00000343253 ZBED4O75132 1171 aa11.66□□□□□ -0.54
CCDC18-201ENST00000343253 OATP04181 439 aa11.66□□□□□ -0.54
CCDC18-201ENST00000343253 DUX4L2P0CJ85 424 aa11.66□□□□□ -0.54
CCDC18-201ENST00000343253 DUX4L3P0CJ86 424 aa11.66□□□□□ -0.54
CCDC18-201ENST00000343253 DUX4L4P0CJ87 422 aa11.66□□□□□ -0.54
CCDC18-201ENST00000343253 DUX4L5P0CJ88 424 aa11.66□□□□□ -0.54
CCDC18-201ENST00000343253 DUX4L6P0CJ89 424 aa11.66□□□□□ -0.54
CCDC18-201ENST00000343253 DUX4L7P0CJ90 424 aa11.66□□□□□ -0.54
CCDC18-201ENST00000343253 KCNJ6P48051 423 aa11.66□□□□□ -0.54
CCDC18-201ENST00000343253 ITKQ08881 620 aa11.66□□□□□ -0.54
CCDC18-201ENST00000343253 KRT31Q15323 416 aa11.66□□□□□ -0.54
CCDC18-201ENST00000343253 KLHL38Q2WGJ6 581 aa11.66□□□□□ -0.54
CCDC18-201ENST00000343253 ADCK5Q3MIX3 580 aa11.66□□□□□ -0.54
CCDC18-201ENST00000343253 FAM102BQ5T8I3 360 aa11.66□□□□□ -0.54
CCDC18-201ENST00000343253 KLC3Q6P597 504 aa11.66□□□□□ -0.54
CCDC18-201ENST00000343253 LRRC8BQ6P9F7 803 aa11.66□□□□□ -0.54
CCDC18-201ENST00000343253 TRIM67Q6ZTA4 783 aa11.66□□□□□ -0.54
CCDC18-201ENST00000343253 SMYD4Q8IYR2 804 aaPredicted RBP11.66□□□□□ -0.54
CCDC18-201ENST00000343253 AGGF1Q8N302 714 aaeCLIP11.66□□□□□ -0.54
CCDC18-201ENST00000343253 ZNF594Q96JF6 807 aaPredicted RBP11.66□□□□□ -0.54
CCDC18-201ENST00000343253 SMYD3Q9H7B4 428 aa11.66□□□□□ -0.54
CCDC18-201ENST00000343253 C10orf88Q9H8K7 445 aa11.66□□□□□ -0.54
CCDC18-201ENST00000343253 DUX4Q9UBX2 424 aa11.66□□□□□ -0.54
CCDC18-201ENST00000343253 TSC22D4Q9Y3Q8 395 aa11.66□□□□□ -0.54
CCDC18-201ENST00000343253 NOC2LQ9Y3T9 749 aaKnown RBP11.66□□□□□ -0.54
CCDC18-201ENST00000343253 SRPRBQ9Y5M8 271 aaKnown RBP11.66□□□□□ -0.54
CCDC18-201ENST00000343253 EIF2AK4Q9P2K8 1649 aaKnown RBP11.66□□□□□ -0.54
CCDC18-201ENST00000343253 DIAPH2O60879 1101 aa11.65□□□□□ -0.54
CCDC18-201ENST00000343253 PMS1P54277 932 aaKnown RBP11.65□□□□□ -0.54
CCDC18-201ENST00000343253 USH1GQ495M9 461 aa11.65□□□□□ -0.54
CCDC18-201ENST00000343253 XKR9Q5GH70 373 aa11.65□□□□□ -0.54
CCDC18-201ENST00000343253 DARS2Q6PI48 645 aaKnown RBP11.65□□□□□ -0.54
CCDC18-201ENST00000343253 MYLK4Q86YV6 388 aaPredicted RBP11.65□□□□□ -0.54
CCDC18-201ENST00000343253 HIC2Q96JB3 615 aa11.65□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 18.8 ms