RNA–Protein interactions for RNA: ENST00000343060.4

HOXA1-201, Transcript of homeobox A1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HOXA1, Length 2,517 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HOXA1-201ENST00000343060 SV2BQ7L1I2 683 aa10.59□□□□□ -0.71
HOXA1-201ENST00000343060 KRT25Q7Z3Z0 450 aa10.59□□□□□ -0.71
HOXA1-201ENST00000343060 CCDC197Q8NCU1 140 aa10.59□□□□□ -0.71
HOXA1-201ENST00000343060 CCHCR1Q8TD31 782 aa10.59□□□□□ -0.71
HOXA1-201ENST00000343060 TBC1D5Q92609 795 aa10.59□□□□□ -0.71
HOXA1-201ENST00000343060 MAGOHBQ96A72 148 aaKnown RBP10.59□□□□□ -0.71
HOXA1-201ENST00000343060 BUD13Q9BRD0 619 aaKnown RBP eCLIP10.59□□□□□ -0.71
HOXA1-201ENST00000343060 PACSIN1Q9BY11 444 aa10.59□□□□□ -0.71
HOXA1-201ENST00000343060 GANQ9H2C0 597 aa10.59□□□□□ -0.71
HOXA1-201ENST00000343060 KCNMB3Q9NPA1 279 aa10.59□□□□□ -0.71
HOXA1-201ENST00000343060 ASAP1Q9ULH1 1129 aa10.59□□□□□ -0.71
HOXA1-201ENST00000343060 NENFQ9UMX5 172 aa10.59□□□□□ -0.71
HOXA1-201ENST00000343060 PHF20L1A8MW92 1017 aa10.58□□□□□ -0.72
HOXA1-201ENST00000343060 DCDC2CA8MYV0 355 aa10.58□□□□□ -0.72
HOXA1-201ENST00000343060 KCNK3O14649 394 aa10.58□□□□□ -0.72
HOXA1-201ENST00000343060 PPFIA2O75334 1257 aa10.58□□□□□ -0.72
HOXA1-201ENST00000343060 CYP19A1P11511 503 aaPredicted RBP10.58□□□□□ -0.72
HOXA1-201ENST00000343060 ALADP13716 330 aa10.58□□□□□ -0.72
HOXA1-201ENST00000343060 FLT3P36888 993 aa10.58□□□□□ -0.72
HOXA1-201ENST00000343060 IRX1P78414 480 aaPredicted RBP10.58□□□□□ -0.72
HOXA1-201ENST00000343060 EVX2Q03828 476 aa10.58□□□□□ -0.72
HOXA1-201ENST00000343060 PSMD2Q13200 908 aa10.58□□□□□ -0.72
HOXA1-201ENST00000343060 E2F5Q15329 346 aa10.58□□□□□ -0.72
HOXA1-201ENST00000343060 FAM47AQ5JRC9 791 aa10.58□□□□□ -0.72
HOXA1-201ENST00000343060 PIGWQ7Z7B1 504 aa10.58□□□□□ -0.72
HOXA1-201ENST00000343060 DGKHQ86XP1 1220 aa10.58□□□□□ -0.72
HOXA1-201ENST00000343060 DDX42Q86XP3 938 aaKnown RBP eCLIP10.58□□□□□ -0.72
HOXA1-201ENST00000343060 GPIHBP1Q8IV16 184 aa10.58□□□□□ -0.72
HOXA1-201ENST00000343060 CALML4Q96GE6 196 aa10.58□□□□□ -0.72
HOXA1-201ENST00000343060 TSG101Q99816 390 aa10.58□□□□□ -0.72
HOXA1-201ENST00000343060 LSM14BQ9BX40 385 aaKnown RBP10.58□□□□□ -0.72
HOXA1-201ENST00000343060 ZMYND12Q9H0C1 365 aa10.58□□□□□ -0.72
HOXA1-201ENST00000343060 CCDC134Q9H6E4 229 aa10.58□□□□□ -0.72
HOXA1-201ENST00000343060 NLRC4Q9NPP4 1024 aa10.58□□□□□ -0.72
HOXA1-201ENST00000343060 MAD2L2Q9UI95 211 aa10.58□□□□□ -0.72
HOXA1-201ENST00000343060 NOC2LQ9Y3T9 749 aaKnown RBP10.58□□□□□ -0.72
HOXA1-201ENST00000343060 COL4A3BPQ9Y5P4 624 aa10.58□□□□□ -0.72
HOXA1-201ENST00000343060 DNA2P51530 1060 aa10.58□□□□□ -0.72
HOXA1-201ENST00000343060 CHRNDQ07001 517 aa10.58□□□□□ -0.72
HOXA1-201ENST00000343060 GRIK3Q13003 919 aa10.58□□□□□ -0.72
HOXA1-201ENST00000343060 SLMAPQ14BN4 828 aa10.58□□□□□ -0.72
HOXA1-201ENST00000343060 IFI16Q16666 785 aaKnown RBP10.58□□□□□ -0.72
HOXA1-201ENST00000343060 LRCH2Q5VUJ6 765 aa10.58□□□□□ -0.72
HOXA1-201ENST00000343060 CPLX4Q7Z7G2 160 aa10.58□□□□□ -0.72
HOXA1-201ENST00000343060 SLFN11Q7Z7L1 901 aa10.58□□□□□ -0.72
HOXA1-201ENST00000343060 ZC3H3Q8IXZ2 948 aaKnown RBP10.58□□□□□ -0.72
HOXA1-201ENST00000343060 UBLCP1Q8WVY7 318 aaPredicted RBP10.58□□□□□ -0.72
HOXA1-201ENST00000343060 CEP63Q96MT8 703 aa10.58□□□□□ -0.72
HOXA1-201ENST00000343060 PNMA5Q96PV4 448 aa10.58□□□□□ -0.72
HOXA1-201ENST00000343060 DCP1AQ9NPI6 582 aaPredicted RBP10.58□□□□□ -0.72
HOXA1-201ENST00000343060 FAM114A2Q9NRY5 505 aa10.58□□□□□ -0.72
HOXA1-201ENST00000343060 ARPP21Q9UBL0 812 aaPredicted RBP10.58□□□□□ -0.72
HOXA1-201ENST00000343060 COL4A1P02462 1669 aa10.58□□□□□ -0.72
HOXA1-201ENST00000343060 NUDT17P0C025 328 aa10.57□□□□□ -0.72
HOXA1-201ENST00000343060 ANXA13P27216 316 aa10.57□□□□□ -0.72
HOXA1-201ENST00000343060 POU5F1Q01860 360 aaKnown RBP10.57□□□□□ -0.72
HOXA1-201ENST00000343060 PPP2R5AQ15172 486 aa10.57□□□□□ -0.72
HOXA1-201ENST00000343060 KRT71Q3SY84 523 aa10.57□□□□□ -0.72
HOXA1-201ENST00000343060 TOM1L2Q6ZVM7 507 aa10.57□□□□□ -0.72
HOXA1-201ENST00000343060 TRIM59Q8IWR1 403 aa10.57□□□□□ -0.72
HOXA1-201ENST00000343060 ATXN2LQ8WWM7 1075 aaKnown RBP10.57□□□□□ -0.72
HOXA1-201ENST00000343060 PIGBQ92521 554 aa10.57□□□□□ -0.72
HOXA1-201ENST00000343060 DDX17Q92841 729 aaKnown RBP10.57□□□□□ -0.72
HOXA1-201ENST00000343060 RSRC1Q96IZ7 334 aaKnown RBP10.57□□□□□ -0.72
HOXA1-201ENST00000343060 ATP8A2Q9NTI2 1148 aa10.57□□□□□ -0.72
HOXA1-201ENST00000343060 ABCF2Q9UG63 623 aa10.57□□□□□ -0.72
HOXA1-201ENST00000343060 STXBP5LQ9Y2K9 1186 aa10.57□□□□□ -0.72
HOXA1-201ENST00000343060 AFF2P51816 1311 aa10.57□□□□□ -0.72
HOXA1-201ENST00000343060 BACH1O14867 736 aa10.57□□□□□ -0.72
HOXA1-201ENST00000343060 CYTH3O43739 400 aa10.57□□□□□ -0.72
HOXA1-201ENST00000343060 IGHMBP2P38935 993 aaKnown RBP10.57□□□□□ -0.72
HOXA1-201ENST00000343060 MMP13P45452 471 aa10.57□□□□□ -0.72
HOXA1-201ENST00000343060 FXR2P51116 673 aaKnown RBP eCLIP10.57□□□□□ -0.72
HOXA1-201ENST00000343060 RNASE9P60153 205 aaKnown RBP10.57□□□□□ -0.72
HOXA1-201ENST00000343060 POLR2FP61218 127 aaKnown RBP10.57□□□□□ -0.72
HOXA1-201ENST00000343060 FKBP3Q00688 224 aaKnown RBP10.57□□□□□ -0.72
HOXA1-201ENST00000343060 KLHL30Q0D2K2 578 aa10.57□□□□□ -0.72
HOXA1-201ENST00000343060 NONOQ15233 471 aaKnown RBP eCLIP10.57□□□□□ -0.72
HOXA1-201ENST00000343060 ASIC2Q16515 512 aa10.57□□□□□ -0.72
HOXA1-201ENST00000343060 ACCSLQ4AC99 568 aa10.57□□□□□ -0.72
HOXA1-201ENST00000343060 ODF2Q5BJF6 829 aa10.57□□□□□ -0.72
HOXA1-201ENST00000343060 HIBCHQ6NVY1 386 aaPredicted RBP10.57□□□□□ -0.72
HOXA1-201ENST00000343060 HOOK3Q86VS8 718 aa10.57□□□□□ -0.72
HOXA1-201ENST00000343060 PROSER2Q86WR7 435 aaPredicted RBP10.57□□□□□ -0.72
HOXA1-201ENST00000343060 METTL13Q8N6R0 699 aa10.57□□□□□ -0.72
HOXA1-201ENST00000343060 CCDC63Q8NA47 563 aa10.57□□□□□ -0.72
HOXA1-201ENST00000343060 PNMA1Q8ND90 353 aa10.57□□□□□ -0.72
HOXA1-201ENST00000343060 ATP8B4Q8TF62 1192 aa10.57□□□□□ -0.72
HOXA1-201ENST00000343060 LARP4BQ92615 738 aaKnown RBP10.57□□□□□ -0.72
HOXA1-201ENST00000343060 L3MBTL3Q96JM7 780 aaPredicted RBP10.57□□□□□ -0.72
HOXA1-201ENST00000343060 TTC7AQ9ULT0 858 aaPredicted RBP10.57□□□□□ -0.72
HOXA1-201ENST00000343060 ZBTB1Q9Y2K1 713 aa10.57□□□□□ -0.72
HOXA1-201ENST00000343060 C15orf41Q9Y2V0 281 aa10.57□□□□□ -0.72
HOXA1-201ENST00000343060 DAPK3O43293 454 aa10.56□□□□□ -0.72
HOXA1-201ENST00000343060 CEP104O60308 925 aa10.56□□□□□ -0.72
HOXA1-201ENST00000343060 GNA14O95837 355 aa10.56□□□□□ -0.72
HOXA1-201ENST00000343060 GBP2P32456 591 aaPredicted RBP10.56□□□□□ -0.72
HOXA1-201ENST00000343060 ZNF268Q14587 947 aaPredicted RBP10.56□□□□□ -0.72
HOXA1-201ENST00000343060 ZKSCAN8Q15776 578 aaPredicted RBP10.56□□□□□ -0.72
HOXA1-201ENST00000343060 CCDC152Q4G0S7 254 aa10.56□□□□□ -0.72
Retrieved 100 of 20,778 RNA–protein pairs in 42.9 ms