RNA–Protein interactions for RNA: ENST00000342494.7

UBE3B-202, Transcript of ubiquitin protein ligase E3B, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene UBE3B, Length 5,722 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE3B-202ENST00000342494 GIMAP8Q8ND71 665 aaPredicted RBP16.24■□□□□ 0.19
UBE3B-202ENST00000342494 PPME1Q9Y570 386 aa16.24■□□□□ 0.19
UBE3B-202ENST00000342494 POC1B-GALNT4F8VUJ3 575 aa16.24■□□□□ 0.19
UBE3B-202ENST00000342494 CPP00450 1065 aa16.24■□□□□ 0.19
UBE3B-202ENST00000342494 SLFN14P0C7P3 912 aa16.24■□□□□ 0.19
UBE3B-202ENST00000342494 ASPHQ12797 758 aa16.24■□□□□ 0.19
UBE3B-202ENST00000342494 THNSL1Q8IYQ7 743 aa16.24■□□□□ 0.19
UBE3B-202ENST00000342494 KCTD6Q8NC69 237 aa16.24■□□□□ 0.19
UBE3B-202ENST00000342494 NT5C2P49902 561 aa16.24■□□□□ 0.19
UBE3B-202ENST00000342494 KSR1Q8IVT5 923 aa16.24■□□□□ 0.19
UBE3B-202ENST00000342494 RAVER2Q9HCJ3 691 aaKnown RBP16.24■□□□□ 0.19
UBE3B-202ENST00000342494 MAGI2Q86UL8 1455 aa16.24■□□□□ 0.19
UBE3B-202ENST00000342494 GFPT2O94808 682 aa16.24■□□□□ 0.19
UBE3B-202ENST00000342494 AP3B2Q13367 1082 aa16.24■□□□□ 0.19
UBE3B-202ENST00000342494 MTMR1Q13613 665 aa16.24■□□□□ 0.19
UBE3B-202ENST00000342494 THOC5Q13769 683 aaKnown RBP16.24■□□□□ 0.19
UBE3B-202ENST00000342494 BRD3Q15059 726 aa16.24■□□□□ 0.19
UBE3B-202ENST00000342494 ARL13BQ3SXY8 428 aa16.24■□□□□ 0.19
UBE3B-202ENST00000342494 BRIP1Q9BX63 1249 aa16.24■□□□□ 0.19
UBE3B-202ENST00000342494 GOLGA8IPA6NC78 632 aa16.24■□□□□ 0.19
UBE3B-202ENST00000342494 GOLGA8JA6NMD2 632 aa16.24■□□□□ 0.19
UBE3B-202ENST00000342494 CLGNO14967 610 aa16.24■□□□□ 0.19
UBE3B-202ENST00000342494 MMEL1Q495T6 779 aa16.24■□□□□ 0.19
UBE3B-202ENST00000342494 THEM5Q8N1Q8 247 aa16.24■□□□□ 0.19
UBE3B-202ENST00000342494 OSBPL3Q9H4L5 887 aa16.24■□□□□ 0.19
UBE3B-202ENST00000342494 PLCG1P19174 1290 aa16.23■□□□□ 0.19
UBE3B-202ENST00000342494 CIITAP33076 1130 aa16.23■□□□□ 0.19
UBE3B-202ENST00000342494 PEX3P56589 373 aa16.23■□□□□ 0.19
UBE3B-202ENST00000342494 MRFAP1L1Q96HT8 127 aa16.23■□□□□ 0.19
UBE3B-202ENST00000342494 BHMT2Q9H2M3 363 aa16.23■□□□□ 0.19
UBE3B-202ENST00000342494 FEM1BQ9UK73 627 aa16.23■□□□□ 0.19
UBE3B-202ENST00000342494 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP16.23■□□□□ 0.19
UBE3B-202ENST00000342494 RPAP1Q9BWH6 1393 aaPredicted RBP16.23■□□□□ 0.19
UBE3B-202ENST00000342494 ZBBXA8MT70 800 aa16.23■□□□□ 0.19
UBE3B-202ENST00000342494 H7C1W4 665 aa16.23■□□□□ 0.19
UBE3B-202ENST00000342494 DARS2Q6PI48 645 aaKnown RBP16.23■□□□□ 0.19
UBE3B-202ENST00000342494 CD209Q9NNX6 404 aa16.23■□□□□ 0.19
UBE3B-202ENST00000342494 TOPORSQ9NS56 1045 aaPredicted RBP16.23■□□□□ 0.19
UBE3B-202ENST00000342494 DENND3A2RUS2 1198 aa16.23■□□□□ 0.19
UBE3B-202ENST00000342494 NFKBIAP25963 317 aa16.23■□□□□ 0.19
UBE3B-202ENST00000342494 OAS2P29728 719 aaKnown RBP16.23■□□□□ 0.19
UBE3B-202ENST00000342494 LIFRP42702 1097 aa16.23■□□□□ 0.19
UBE3B-202ENST00000342494 PSMD2Q13200 908 aa16.23■□□□□ 0.19
UBE3B-202ENST00000342494 USP17L10C9JJH3 530 aa16.23■□□□□ 0.19
UBE3B-202ENST00000342494 SGO2Q562F6 1265 aa16.23■□□□□ 0.19
UBE3B-202ENST00000342494 TWF2Q6IBS0 349 aaKnown RBP16.23■□□□□ 0.19
UBE3B-202ENST00000342494 CEP120Q8N960 986 aa16.23■□□□□ 0.19
UBE3B-202ENST00000342494 COL15A1P39059 1388 aa16.23■□□□□ 0.19
UBE3B-202ENST00000342494 DBN1Q16643 649 aa16.22■□□□□ 0.19
UBE3B-202ENST00000342494 SLC27A3Q5K4L6 730 aa16.22■□□□□ 0.19
UBE3B-202ENST00000342494 CYP27B1O15528 508 aa16.22■□□□□ 0.19
UBE3B-202ENST00000342494 LDHAP00338 332 aaKnown RBP16.22■□□□□ 0.19
UBE3B-202ENST00000342494 ELMOD1Q8N336 334 aa16.22■□□□□ 0.19
UBE3B-202ENST00000342494 FAM133AQ8N9E0 248 aa16.22■□□□□ 0.19
UBE3B-202ENST00000342494 MIPOL1Q8TD10 442 aa16.22■□□□□ 0.19
UBE3B-202ENST00000342494 MINPP1Q9UNW1 487 aa16.22■□□□□ 0.19
UBE3B-202ENST00000342494 GUCY2DQ02846 1103 aa16.22■□□□□ 0.19
UBE3B-202ENST00000342494 GRAMD1CQ8IYS0 662 aa16.22■□□□□ 0.19
UBE3B-202ENST00000342494 VCX3AQ9NNX9 186 aa16.22■□□□□ 0.19
UBE3B-202ENST00000342494 EFCAB8A8MWE9 144 aa16.22■□□□□ 0.19
UBE3B-202ENST00000342494 PRDX5P30044 214 aa16.22■□□□□ 0.19
UBE3B-202ENST00000342494 SNX1Q13596 522 aa16.22■□□□□ 0.19
UBE3B-202ENST00000342494 ATP6V0A4Q9HBG4 840 aa16.22■□□□□ 0.19
UBE3B-202ENST00000342494 MCAMP43121 646 aa16.22■□□□□ 0.19
UBE3B-202ENST00000342494 OTUD5Q96G74 571 aa16.22■□□□□ 0.19
UBE3B-202ENST00000342494 F8W8V4 182 aa16.21■□□□□ 0.19
UBE3B-202ENST00000342494 NKX1-1Q15270 411 aaPredicted RBP16.21■□□□□ 0.19
UBE3B-202ENST00000342494 ZNF667Q5HYK9 610 aa16.21■□□□□ 0.19
UBE3B-202ENST00000342494 RNF219Q5W0B1 726 aaPredicted RBP16.21■□□□□ 0.19
UBE3B-202ENST00000342494 LRRC8CQ8TDW0 803 aa16.21■□□□□ 0.19
UBE3B-202ENST00000342494 NSUN6Q8TEA1 469 aaKnown RBP16.21■□□□□ 0.19
UBE3B-202ENST00000342494 PCDHA6Q9UN73 950 aa16.21■□□□□ 0.19
UBE3B-202ENST00000342494 PCDHA8Q9Y5H6 950 aa16.21■□□□□ 0.19
UBE3B-202ENST00000342494 ZNF18P17022 549 aa16.21■□□□□ 0.19
UBE3B-202ENST00000342494 CASP2P42575 452 aa16.21■□□□□ 0.19
UBE3B-202ENST00000342494 BASP1P80723 227 aaKnown RBP16.21■□□□□ 0.19
UBE3B-202ENST00000342494 TBC1D9BQ66K14 1250 aa16.21■□□□□ 0.19
UBE3B-202ENST00000342494 HAUS8Q9BT25 410 aa16.21■□□□□ 0.19
UBE3B-202ENST00000342494 LRRD1A4D1F6 860 aa16.21■□□□□ 0.19
UBE3B-202ENST00000342494 IQCA1LA6NCM1 817 aa16.21■□□□□ 0.19
UBE3B-202ENST00000342494 ZBTB5O15062 677 aa16.21■□□□□ 0.19
UBE3B-202ENST00000342494 SPP2Q13103 211 aa16.21■□□□□ 0.19
UBE3B-202ENST00000342494 KRT33BQ14525 404 aa16.21■□□□□ 0.19
UBE3B-202ENST00000342494 TTC30AQ86WT1 665 aa16.21■□□□□ 0.19
UBE3B-202ENST00000342494 ARHGEF1Q92888 912 aaKnown RBP16.21■□□□□ 0.19
UBE3B-202ENST00000342494 FAM8A1Q9UBU6 413 aa16.21■□□□□ 0.19
UBE3B-202ENST00000342494 STK38LQ9Y2H1 464 aa16.21■□□□□ 0.19
UBE3B-202ENST00000342494 PHKA2P46019 1235 aa16.21■□□□□ 0.18
UBE3B-202ENST00000342494 NDUFAF2Q8N183 169 aa16.21■□□□□ 0.18
UBE3B-202ENST00000342494 RNF10Q8N5U6 811 aaKnown RBP16.21■□□□□ 0.18
UBE3B-202ENST00000342494 CLASP1Q7Z460 1538 aa16.2■□□□□ 0.18
UBE3B-202ENST00000342494 DPYSL4O14531 572 aa16.2■□□□□ 0.18
UBE3B-202ENST00000342494 ETF1P62495 437 aaKnown RBP16.2■□□□□ 0.18
UBE3B-202ENST00000342494 MAPK6Q16659 721 aa16.2■□□□□ 0.18
UBE3B-202ENST00000342494 MFSD14CQ5VZR4 134 aa16.2■□□□□ 0.18
UBE3B-202ENST00000342494 RNF146Q9NTX7 359 aa16.2■□□□□ 0.18
UBE3B-202ENST00000342494 ABCF3Q9NUQ8 709 aa16.2■□□□□ 0.18
UBE3B-202ENST00000342494 GOLGA8KD6RF30 607 aa16.2■□□□□ 0.18
UBE3B-202ENST00000342494 GPSM2P81274 684 aa16.2■□□□□ 0.18
UBE3B-202ENST00000342494 PKP1Q13835 747 aa16.2■□□□□ 0.18
Retrieved 100 of 20,778 RNA–protein pairs in 26.9 ms