RNA–Protein interactions for RNA: ENST00000342415.5

SNRNP48-201, Transcript of small nuclear ribonucleoprotein U11/U12 subunit 48, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SNRNP48, Length 4,173 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRNP48-201ENST00000342415 PPP1R12CQ9BZL4 782 aa13.55□□□□□ -0.24
SNRNP48-201ENST00000342415 FOXP2O15409 715 aa13.54□□□□□ -0.24
SNRNP48-201ENST00000342415 KLRC1P26715 233 aa13.54□□□□□ -0.24
SNRNP48-201ENST00000342415 SEC23AQ15436 765 aa13.54□□□□□ -0.24
SNRNP48-201ENST00000342415 FBXO11Q86XK2 927 aa13.54□□□□□ -0.24
SNRNP48-201ENST00000342415 SFR1Q86XK3 245 aa13.54□□□□□ -0.24
SNRNP48-201ENST00000342415 ZNF34Q8IZ26 560 aa13.54□□□□□ -0.24
SNRNP48-201ENST00000342415 OGFOD1Q8N543 542 aa13.54□□□□□ -0.24
SNRNP48-201ENST00000342415 FMO2Q99518 471 aa13.54□□□□□ -0.24
SNRNP48-201ENST00000342415 PEX19P40855 299 aa13.54□□□□□ -0.24
SNRNP48-201ENST00000342415 MXRA7P84157 204 aa13.54□□□□□ -0.24
SNRNP48-201ENST00000342415 ICA1Q05084 483 aa13.54□□□□□ -0.24
SNRNP48-201ENST00000342415 TRAPPC11Q7Z392 1133 aa13.54□□□□□ -0.24
SNRNP48-201ENST00000342415 CHORDC1Q9UHD1 332 aaPredicted RBP13.54□□□□□ -0.24
SNRNP48-201ENST00000342415 SETDB1Q15047 1291 aa13.54□□□□□ -0.24
SNRNP48-201ENST00000342415 C12orf60Q5U649 245 aa13.54□□□□□ -0.24
SNRNP48-201ENST00000342415 TRIM68Q6AZZ1 485 aa13.54□□□□□ -0.24
SNRNP48-201ENST00000342415 TMED8Q6PL24 325 aaPredicted RBP13.54□□□□□ -0.24
SNRNP48-201ENST00000342415 NSMFQ6X4W1 530 aa13.54□□□□□ -0.24
SNRNP48-201ENST00000342415 FAM196AQ6ZSG2 479 aa13.54□□□□□ -0.24
SNRNP48-201ENST00000342415 TBC1D1Q86TI0 1168 aaPredicted RBP13.54□□□□□ -0.24
SNRNP48-201ENST00000342415 MSANTD4Q8NCY6 345 aa13.54□□□□□ -0.24
SNRNP48-201ENST00000342415 MYCBPQ99417 103 aaPredicted RBP13.54□□□□□ -0.24
SNRNP48-201ENST00000342415 ELAC2Q9BQ52 826 aaKnown RBP13.54□□□□□ -0.24
SNRNP48-201ENST00000342415 EFCC1Q9HA90 598 aa13.54□□□□□ -0.24
SNRNP48-201ENST00000342415 C1orf167Q5SNV9 1468 aa13.54□□□□□ -0.24
SNRNP48-201ENST00000342415 A0A1B0GUA9 196 aa13.53□□□□□ -0.24
SNRNP48-201ENST00000342415 K7ENM7 598 aa13.53□□□□□ -0.24
SNRNP48-201ENST00000342415 ACSL3O95573 720 aa13.53□□□□□ -0.24
SNRNP48-201ENST00000342415 TTLL1O95922 423 aa13.53□□□□□ -0.24
SNRNP48-201ENST00000342415 COPB2P35606 906 aa13.53□□□□□ -0.24
SNRNP48-201ENST00000342415 LACTBP83111 547 aaPredicted RBP13.53□□□□□ -0.24
SNRNP48-201ENST00000342415 KCNB1Q14721 858 aa13.53□□□□□ -0.24
SNRNP48-201ENST00000342415 CCDC38Q502W7 563 aa13.53□□□□□ -0.24
SNRNP48-201ENST00000342415 TXNRD3Q86VQ6 643 aa13.53□□□□□ -0.24
SNRNP48-201ENST00000342415 CCSER1Q9C0I3 900 aa13.53□□□□□ -0.24
SNRNP48-201ENST00000342415 HSD3B7Q9H2F3 369 aa13.53□□□□□ -0.24
SNRNP48-201ENST00000342415 SH2D4AQ9H788 454 aa13.53□□□□□ -0.24
SNRNP48-201ENST00000342415 PDE6BP35913 854 aa13.53□□□□□ -0.24
SNRNP48-201ENST00000342415 ADCY8P40145 1251 aa13.53□□□□□ -0.24
SNRNP48-201ENST00000342415 RCAN1P53805 252 aa13.53□□□□□ -0.24
SNRNP48-201ENST00000342415 GRM4Q14833 912 aa13.53□□□□□ -0.24
SNRNP48-201ENST00000342415 CYP4F22Q6NT55 531 aa13.53□□□□□ -0.24
SNRNP48-201ENST00000342415 TMEM139Q8IV31 216 aa13.53□□□□□ -0.24
SNRNP48-201ENST00000342415 GLYCTKQ8IVS8 523 aa13.53□□□□□ -0.24
SNRNP48-201ENST00000342415 GDAP1Q8TB36 358 aa13.53□□□□□ -0.24
SNRNP48-201ENST00000342415 MUM1L1Q5H9M0 696 aa13.53□□□□□ -0.24
SNRNP48-201ENST00000342415 KAZNQ674X7 775 aa13.53□□□□□ -0.24
SNRNP48-201ENST00000342415 PDXDC2PQ6P474 469 aa13.53□□□□□ -0.24
SNRNP48-201ENST00000342415 RAD54LQ92698 747 aa13.53□□□□□ -0.24
SNRNP48-201ENST00000342415 DBNDD1Q9H9R9 158 aa13.53□□□□□ -0.24
SNRNP48-201ENST00000342415 FBXL5Q9UKA1 691 aa13.53□□□□□ -0.24
SNRNP48-201ENST00000342415 MYO1FO00160 1098 aa13.53□□□□□ -0.24
SNRNP48-201ENST00000342415 SLC9A1P19634 815 aa13.53□□□□□ -0.24
SNRNP48-201ENST00000342415 GUF1Q8N442 669 aaKnown RBP13.53□□□□□ -0.24
SNRNP48-201ENST00000342415 WHAMMQ8TF30 809 aa13.53□□□□□ -0.24
SNRNP48-201ENST00000342415 TEKT1Q969V4 418 aa13.53□□□□□ -0.24
SNRNP48-201ENST00000342415 FNBP1Q96RU3 617 aa13.53□□□□□ -0.24
SNRNP48-201ENST00000342415 CDCA7Q9BWT1 371 aaPredicted RBP13.53□□□□□ -0.24
SNRNP48-201ENST00000342415 IQCGQ9H095 443 aaKnown RBP13.53□□□□□ -0.24
SNRNP48-201ENST00000342415 USP21Q9UK80 565 aa13.53□□□□□ -0.24
SNRNP48-201ENST00000342415 CEP83Q9Y592 693 aa13.53□□□□□ -0.24
SNRNP48-201ENST00000342415 GOLGA8IPA6NC78 632 aa13.52□□□□□ -0.24
SNRNP48-201ENST00000342415 GOLGA8JA6NMD2 632 aa13.52□□□□□ -0.24
SNRNP48-201ENST00000342415 PCK1P35558 622 aa13.52□□□□□ -0.24
SNRNP48-201ENST00000342415 ZNF131P52739 623 aa13.52□□□□□ -0.24
SNRNP48-201ENST00000342415 HDLBPQ00341 1268 aaKnown RBP13.52□□□□□ -0.24
SNRNP48-201ENST00000342415 LRRC14Q15048 493 aa13.52□□□□□ -0.24
SNRNP48-201ENST00000342415 TAOK1Q7L7X3 1001 aa13.52□□□□□ -0.24
SNRNP48-201ENST00000342415 CCDC63Q8NA47 563 aa13.52□□□□□ -0.24
SNRNP48-201ENST00000342415 PPP1R14CQ8TAE6 165 aa13.52□□□□□ -0.24
SNRNP48-201ENST00000342415 MTA3Q9BTC8 594 aa13.52□□□□□ -0.24
SNRNP48-201ENST00000342415 UBE2TQ9NPD8 197 aaPredicted RBP13.52□□□□□ -0.24
SNRNP48-201ENST00000342415 SART1O43290 800 aaKnown RBP13.52□□□□□ -0.25
SNRNP48-201ENST00000342415 ORC4O43929 436 aa13.52□□□□□ -0.25
SNRNP48-201ENST00000342415 PDXDC1Q6P996 788 aa13.52□□□□□ -0.25
SNRNP48-201ENST00000342415 ZNF512BQ96KM6 892 aaPredicted RBP13.52□□□□□ -0.25
SNRNP48-201ENST00000342415 NAP1L4Q99733 375 aaKnown RBP13.52□□□□□ -0.25
SNRNP48-201ENST00000342415 CEP72Q9P209 647 aa13.52□□□□□ -0.25
SNRNP48-201ENST00000342415 ODF2LQ9ULJ1 636 aa13.52□□□□□ -0.25
SNRNP48-201ENST00000342415 PDE2AO00408 941 aaPredicted RBP13.52□□□□□ -0.25
SNRNP48-201ENST00000342415 TRIM49P0CI25 452 aa13.52□□□□□ -0.25
SNRNP48-201ENST00000342415 TRIM49CP0CI26 452 aa13.52□□□□□ -0.25
SNRNP48-201ENST00000342415 CALRP27797 417 aaKnown RBP13.52□□□□□ -0.25
SNRNP48-201ENST00000342415 SNCBQ16143 134 aa13.52□□□□□ -0.25
SNRNP48-201ENST00000342415 TTI2Q6NXR4 508 aa13.52□□□□□ -0.25
SNRNP48-201ENST00000342415 CCDC197Q8NCU1 140 aa13.52□□□□□ -0.25
SNRNP48-201ENST00000342415 TBC1D22AQ8WUA7 517 aa13.52□□□□□ -0.25
SNRNP48-201ENST00000342415 RIOK1Q9BRS2 568 aaKnown RBP13.52□□□□□ -0.25
SNRNP48-201ENST00000342415 CELF4Q9BZC1 486 aaKnown RBP13.52□□□□□ -0.25
SNRNP48-201ENST00000342415 METTL14Q9HCE5 456 aaKnown RBP13.52□□□□□ -0.25
SNRNP48-201ENST00000342415 SH3GLB2Q9NR46 395 aa13.52□□□□□ -0.25
SNRNP48-201ENST00000342415 TMOD4Q9NZQ9 345 aa13.52□□□□□ -0.25
SNRNP48-201ENST00000342415 ARHGAP20Q9P2F6 1191 aa13.52□□□□□ -0.25
SNRNP48-201ENST00000342415 NEBLO76041 1014 aa13.51□□□□□ -0.25
SNRNP48-201ENST00000342415 MYBL2P10244 700 aa13.51□□□□□ -0.25
SNRNP48-201ENST00000342415 ASPRV1Q53RT3 343 aa13.51□□□□□ -0.25
SNRNP48-201ENST00000342415 LRCH2Q5VUJ6 765 aa13.51□□□□□ -0.25
SNRNP48-201ENST00000342415 MCTP2Q6DN12 878 aa13.51□□□□□ -0.25
SNRNP48-201ENST00000342415 HOOK2Q96ED9 719 aa13.51□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 33.7 ms