RNA–Protein interactions for RNA: ENST00000342245.8

SMPD1-201, Transcript of sphingomyelin phosphodiesterase 1, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene SMPD1, Length 2,452 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMPD1-201ENST00000342245 SIK3Q9Y2K2 1263 aa20.21■□□□□ 0.83
SMPD1-201ENST00000342245 AGTP01019 485 aa20.2■□□□□ 0.82
SMPD1-201ENST00000342245 ADD2P35612 726 aa20.2■□□□□ 0.82
SMPD1-201ENST00000342245 DHX9Q08211 1270 aaKnown RBP20.2■□□□□ 0.82
SMPD1-201ENST00000342245 KCNH5Q8NCM2 988 aa20.2■□□□□ 0.82
SMPD1-201ENST00000342245 SELENOSQ9BQE4 189 aa20.2■□□□□ 0.82
SMPD1-201ENST00000342245 RNPEPL1Q9HAU8 725 aa20.2■□□□□ 0.82
SMPD1-201ENST00000342245 CTTNBP2NLQ9P2B4 639 aa20.2■□□□□ 0.82
SMPD1-201ENST00000342245 ANAPC4Q9UJX5 808 aa20.2■□□□□ 0.82
SMPD1-201ENST00000342245 ARFGEF2Q9Y6D5 1785 aa20.2■□□□□ 0.82
SMPD1-201ENST00000342245 MYH6P13533 1939 aa20.2■□□□□ 0.82
SMPD1-201ENST00000342245 UBE3CQ15386 1083 aa20.2■□□□□ 0.82
SMPD1-201ENST00000342245 RPS6KA1Q15418 735 aa20.2■□□□□ 0.82
SMPD1-201ENST00000342245 PARP6Q2NL67 630 aa20.2■□□□□ 0.82
SMPD1-201ENST00000342245 ANKRD13CQ8N6S4 541 aa20.2■□□□□ 0.82
SMPD1-201ENST00000342245 FANCBQ8NB91 859 aa20.2■□□□□ 0.82
SMPD1-201ENST00000342245 KIFAP3Q92845 792 aa20.2■□□□□ 0.82
SMPD1-201ENST00000342245 RXFP1Q9HBX9 757 aa20.2■□□□□ 0.82
SMPD1-201ENST00000342245 BTNL10A8MVZ5 291 aa20.19■□□□□ 0.82
SMPD1-201ENST00000342245 ATP5HO75947 161 aa20.19■□□□□ 0.82
SMPD1-201ENST00000342245 CCNB1P14635 433 aa20.19■□□□□ 0.82
SMPD1-201ENST00000342245 SLC1A4P43007 532 aa20.19■□□□□ 0.82
SMPD1-201ENST00000342245 PSMC4P43686 418 aa20.19■□□□□ 0.82
SMPD1-201ENST00000342245 SLC9C1Q4G0N8 1177 aa20.19■□□□□ 0.82
SMPD1-201ENST00000342245 VWA3BQ502W6 1294 aa20.19■□□□□ 0.82
SMPD1-201ENST00000342245 RRP12Q5JTH9 1297 aaKnown RBP20.19■□□□□ 0.82
SMPD1-201ENST00000342245 IRGCQ6NXR0 463 aa20.19■□□□□ 0.82
SMPD1-201ENST00000342245 COL23A1Q86Y22 540 aaPredicted RBP20.19■□□□□ 0.82
SMPD1-201ENST00000342245 MAGEF1Q9HAY2 307 aa20.19■□□□□ 0.82
SMPD1-201ENST00000342245 STK38LQ9Y2H1 464 aa20.19■□□□□ 0.82
SMPD1-201ENST00000342245 LRRC53A6NM62 1247 aa20.19■□□□□ 0.82
SMPD1-201ENST00000342245 GCP02774 474 aa20.19■□□□□ 0.82
SMPD1-201ENST00000342245 GNAQP50148 359 aa20.19■□□□□ 0.82
SMPD1-201ENST00000342245 C6orf118Q5T5N4 469 aa20.19■□□□□ 0.82
SMPD1-201ENST00000342245 RRAGAQ7L523 313 aa20.19■□□□□ 0.82
SMPD1-201ENST00000342245 FAM192AQ9GZU8 254 aa20.19■□□□□ 0.82
SMPD1-201ENST00000342245 BCL9O00512 1426 aa20.19■□□□□ 0.82
SMPD1-201ENST00000342245 TIAM2Q8IVF5 1701 aa20.19■□□□□ 0.82
SMPD1-201ENST00000342245 PGRMC1O00264 195 aaKnown RBP20.18■□□□□ 0.82
SMPD1-201ENST00000342245 FGFR1OPO95684 399 aaKnown RBP20.18■□□□□ 0.82
SMPD1-201ENST00000342245 FTCDO95954 541 aa20.18■□□□□ 0.82
SMPD1-201ENST00000342245 SP100P23497 879 aaPredicted RBP20.18■□□□□ 0.82
SMPD1-201ENST00000342245 SH3BGRP55822 239 aaPredicted RBP20.18■□□□□ 0.82
SMPD1-201ENST00000342245 GFPT1Q06210 699 aaPredicted RBP20.18■□□□□ 0.82
SMPD1-201ENST00000342245 EHHADHQ08426 723 aa20.18■□□□□ 0.82
SMPD1-201ENST00000342245 DIXDC1Q155Q3 683 aa20.18■□□□□ 0.82
SMPD1-201ENST00000342245 PDXDC1Q6P996 788 aa20.18■□□□□ 0.82
SMPD1-201ENST00000342245 TMEM154Q6P9G4 183 aa20.18■□□□□ 0.82
SMPD1-201ENST00000342245 NKX2-3Q8TAU0 364 aa20.18■□□□□ 0.82
SMPD1-201ENST00000342245 MAIP1Q8WWC4 291 aa20.18■□□□□ 0.82
SMPD1-201ENST00000342245 NEUROG2Q9H2A3 272 aa20.18■□□□□ 0.82
SMPD1-201ENST00000342245 ARHGEF10LQ9HCE6 1279 aa20.18■□□□□ 0.82
SMPD1-201ENST00000342245 ARL2BPQ9Y2Y0 163 aa20.18■□□□□ 0.82
SMPD1-201ENST00000342245 UTP11Q9Y3A2 253 aaKnown RBP20.18■□□□□ 0.82
SMPD1-201ENST00000342245 ADAMTS7Q9UKP4 1686 aa20.18■□□□□ 0.82
SMPD1-201ENST00000342245 C5P01031 1676 aa20.18■□□□□ 0.82
SMPD1-201ENST00000342245 CHD4Q14839 1912 aa20.18■□□□□ 0.82
SMPD1-201ENST00000342245 MYH2Q9UKX2 1941 aa20.18■□□□□ 0.82
SMPD1-201ENST00000342245 FAM205CA6NFA0 338 aa20.18■□□□□ 0.82
SMPD1-201ENST00000342245 KLRC4O43908 158 aa20.18■□□□□ 0.82
SMPD1-201ENST00000342245 GJB6O95452 261 aa20.18■□□□□ 0.82
SMPD1-201ENST00000342245 ZAP70P43403 619 aa20.18■□□□□ 0.82
SMPD1-201ENST00000342245 PLS1Q14651 629 aa20.18■□□□□ 0.82
SMPD1-201ENST00000342245 COBLL1Q53SF7 1204 aa20.18■□□□□ 0.82
SMPD1-201ENST00000342245 CCDC178Q5BJE1 867 aa20.18■□□□□ 0.82
SMPD1-201ENST00000342245 SUPV3L1Q8IYB8 786 aaKnown RBP eCLIP20.18■□□□□ 0.82
SMPD1-201ENST00000342245 SYT15Q9BQS2 421 aa20.18■□□□□ 0.82
SMPD1-201ENST00000342245 ZWILCHQ9H900 591 aa20.18■□□□□ 0.82
SMPD1-201ENST00000342245 PIDD1Q9HB75 910 aa20.18■□□□□ 0.82
SMPD1-201ENST00000342245 DMAP1Q9NPF5 467 aaPredicted RBP20.18■□□□□ 0.82
SMPD1-201ENST00000342245 DISC1Q9NRI5 854 aa20.18■□□□□ 0.82
SMPD1-201ENST00000342245 PNPLA7Q6ZV29 1317 aa20.18■□□□□ 0.82
SMPD1-201ENST00000342245 PEX5P50542 639 aa20.17■□□□□ 0.82
SMPD1-201ENST00000342245 CCDC15Q0P6D6 951 aa20.17■□□□□ 0.82
SMPD1-201ENST00000342245 TAOK1Q7L7X3 1001 aa20.17■□□□□ 0.82
SMPD1-201ENST00000342245 ARHGAP18Q8N392 663 aa20.17■□□□□ 0.82
SMPD1-201ENST00000342245 STK32AQ8WU08 396 aa20.17■□□□□ 0.82
SMPD1-201ENST00000342245 FGD4Q96M96 766 aa20.17■□□□□ 0.82
SMPD1-201ENST00000342245 PRMT1Q99873 361 aaKnown RBP20.17■□□□□ 0.82
SMPD1-201ENST00000342245 TXLNGYQ9BZA5 131 aa20.17■□□□□ 0.82
SMPD1-201ENST00000342245 SCOCQ9UIL1 159 aa20.17■□□□□ 0.82
SMPD1-201ENST00000342245 BLOC1S6Q9UL45 172 aa20.17■□□□□ 0.82
SMPD1-201ENST00000342245 RPL26L1Q9UNX3 145 aaKnown RBP20.17■□□□□ 0.82
SMPD1-201ENST00000342245 SERPING1P05155 500 aa20.17■□□□□ 0.82
SMPD1-201ENST00000342245 TNFRSF25Q93038 417 aa20.17■□□□□ 0.82
SMPD1-201ENST00000342245 ADAM7Q9H2U9 754 aa20.17■□□□□ 0.82
SMPD1-201ENST00000342245 CUEDC2Q9H467 287 aa20.17■□□□□ 0.82
SMPD1-201ENST00000342245 TXLNGQ9NUQ3 528 aa20.17■□□□□ 0.82
SMPD1-201ENST00000342245 RTL9Q8NET4 1388 aa20.16■□□□□ 0.82
SMPD1-201ENST00000342245 RGS16O15492 202 aaPredicted RBP20.16■□□□□ 0.82
SMPD1-201ENST00000342245 PRPF3O43395 683 aaKnown RBP20.16■□□□□ 0.82
SMPD1-201ENST00000342245 LMNAP02545 664 aaKnown RBP20.16■□□□□ 0.82
SMPD1-201ENST00000342245 LRRC24Q50LG9 513 aa20.16■□□□□ 0.82
SMPD1-201ENST00000342245 AKNAD1Q5T1N1 836 aa20.16■□□□□ 0.82
SMPD1-201ENST00000342245 C10orf76Q5T2E6 689 aa20.16■□□□□ 0.82
SMPD1-201ENST00000342245 ENDOVQ8N8Q3 282 aaKnown RBP20.16■□□□□ 0.82
SMPD1-201ENST00000342245 BAP1Q92560 729 aa20.16■□□□□ 0.82
SMPD1-201ENST00000342245 IFT43Q96FT9 208 aa20.16■□□□□ 0.82
SMPD1-201ENST00000342245 BUD13Q9BRD0 619 aaKnown RBP eCLIP20.16■□□□□ 0.82
SMPD1-201ENST00000342245 PCMTD2Q9NV79 361 aa20.16■□□□□ 0.82
Retrieved 100 of 20,778 RNA–protein pairs in 18.1 ms