RNA–Protein interactions for RNA: ENST00000341947.6

COL11A2-201, Transcript of collagen type XI alpha 2 chain, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene COL11A2, Length 6,425 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL11A2-201ENST00000341947 PLA2G4BP0C869 781 aa16.44■□□□□ 0.22
COL11A2-201ENST00000341947 UBE2SQ16763 222 aa16.44■□□□□ 0.22
COL11A2-201ENST00000341947 DEPDC1BQ8WUY9 529 aa16.44■□□□□ 0.22
COL11A2-201ENST00000341947 TCP11Q8WWU5 503 aa16.44■□□□□ 0.22
COL11A2-201ENST00000341947 ATG3Q9NT62 314 aa16.44■□□□□ 0.22
COL11A2-201ENST00000341947 STAP2Q9UGK3 403 aa16.44■□□□□ 0.22
COL11A2-201ENST00000341947 SRGAP2CP0DJJ0 459 aa16.44■□□□□ 0.22
COL11A2-201ENST00000341947 PRPF3O43395 683 aaKnown RBP16.44■□□□□ 0.22
COL11A2-201ENST00000341947 SLFN12LQ6IEE8 588 aa16.44■□□□□ 0.22
COL11A2-201ENST00000341947 CYP4F22Q6NT55 531 aa16.44■□□□□ 0.22
COL11A2-201ENST00000341947 PPP1R13BQ96KQ4 1090 aa16.44■□□□□ 0.22
COL11A2-201ENST00000341947 RWDD2AQ9UIY3 292 aa16.44■□□□□ 0.22
COL11A2-201ENST00000341947 PNMA6FA0A0J9YX94 578 aa16.44■□□□□ 0.22
COL11A2-201ENST00000341947 SH2B2O14492 632 aaPredicted RBP16.44■□□□□ 0.22
COL11A2-201ENST00000341947 MT-ND3P03897 115 aa16.44■□□□□ 0.22
COL11A2-201ENST00000341947 MARK3P27448 753 aa16.44■□□□□ 0.22
COL11A2-201ENST00000341947 SLC8A1P32418 973 aa16.44■□□□□ 0.22
COL11A2-201ENST00000341947 RC3H1Q5TC82 1133 aaKnown RBP16.44■□□□□ 0.22
COL11A2-201ENST00000341947 RSBN1LQ6PCB5 846 aaPredicted RBP16.44■□□□□ 0.22
COL11A2-201ENST00000341947 USP17L2Q6R6M4 530 aa16.44■□□□□ 0.22
COL11A2-201ENST00000341947 SMYD4Q8IYR2 804 aaPredicted RBP16.44■□□□□ 0.22
COL11A2-201ENST00000341947 CDC23Q9UJX2 597 aa16.44■□□□□ 0.22
COL11A2-201ENST00000341947 ENC1O14682 589 aa16.43■□□□□ 0.22
COL11A2-201ENST00000341947 PRKAB2O43741 272 aa16.43■□□□□ 0.22
COL11A2-201ENST00000341947 HSPA6P17066 643 aa16.43■□□□□ 0.22
COL11A2-201ENST00000341947 GRAPQ13588 217 aa16.43■□□□□ 0.22
COL11A2-201ENST00000341947 GRAPLQ8TC17 118 aaPredicted RBP16.43■□□□□ 0.22
COL11A2-201ENST00000341947 PBKQ96KB5 322 aa16.43■□□□□ 0.22
COL11A2-201ENST00000341947 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP16.43■□□□□ 0.22
COL11A2-201ENST00000341947 ERVV-1B6SEH8 477 aa16.43■□□□□ 0.22
COL11A2-201ENST00000341947 USP17L8P0C7I0 530 aa16.43■□□□□ 0.22
COL11A2-201ENST00000341947 SRRM1Q8IYB3 904 aaKnown RBP16.43■□□□□ 0.22
COL11A2-201ENST00000341947 CCDC197Q8NCU1 140 aa16.43■□□□□ 0.22
COL11A2-201ENST00000341947 ZBED2Q9BTP6 218 aa16.43■□□□□ 0.22
COL11A2-201ENST00000341947 THAP9Q9H5L6 903 aa16.43■□□□□ 0.22
COL11A2-201ENST00000341947 PPP1R9AQ9ULJ8 1098 aa16.43■□□□□ 0.22
COL11A2-201ENST00000341947 MX2P20592 715 aa16.43■□□□□ 0.22
COL11A2-201ENST00000341947 IFNAR2P48551 515 aa16.43■□□□□ 0.22
COL11A2-201ENST00000341947 EPHB4P54760 987 aa16.43■□□□□ 0.22
COL11A2-201ENST00000341947 PLTPP55058 493 aa16.43■□□□□ 0.22
COL11A2-201ENST00000341947 HP1BP3Q5SSJ5 553 aaPredicted RBP16.43■□□□□ 0.22
COL11A2-201ENST00000341947 C1orf228Q6PIY5 440 aa16.43■□□□□ 0.22
COL11A2-201ENST00000341947 MID2Q9UJV3 735 aa16.43■□□□□ 0.22
COL11A2-201ENST00000341947 MAN1B1Q9UKM7 699 aa16.43■□□□□ 0.22
COL11A2-201ENST00000341947 MYCP01106 439 aaPredicted RBP16.43■□□□□ 0.22
COL11A2-201ENST00000341947 PMLP29590 882 aa16.43■□□□□ 0.22
COL11A2-201ENST00000341947 NSUN7Q8NE18 718 aaKnown RBP16.43■□□□□ 0.22
COL11A2-201ENST00000341947 DYNLL2Q96FJ2 89 aa16.43■□□□□ 0.22
COL11A2-201ENST00000341947 NLRP4Q96MN2 994 aa16.43■□□□□ 0.22
COL11A2-201ENST00000341947 LRRD1A4D1F6 860 aa16.43■□□□□ 0.22
COL11A2-201ENST00000341947 THEM5Q8N1Q8 247 aa16.43■□□□□ 0.22
COL11A2-201ENST00000341947 PPWD1Q96BP3 646 aaKnown RBP16.43■□□□□ 0.22
COL11A2-201ENST00000341947 CCDC124Q96CT7 223 aaKnown RBP16.43■□□□□ 0.22
COL11A2-201ENST00000341947 HINFPQ9BQA5 517 aa16.43■□□□□ 0.22
COL11A2-201ENST00000341947 RRAGDQ9NQL2 400 aaPredicted RBP16.43■□□□□ 0.22
COL11A2-201ENST00000341947 PCGF5Q86SE9 256 aa16.42■□□□□ 0.22
COL11A2-201ENST00000341947 TTC25Q96NG3 672 aa16.42■□□□□ 0.22
COL11A2-201ENST00000341947 UBN2Q6ZU65 1347 aa16.42■□□□□ 0.22
COL11A2-201ENST00000341947 IKBKBO14920 756 aa16.42■□□□□ 0.22
COL11A2-201ENST00000341947 BNIP3LO60238 219 aa16.42■□□□□ 0.22
COL11A2-201ENST00000341947 CYP21A2P08686 494 aa16.42■□□□□ 0.22
COL11A2-201ENST00000341947 CLTAP09496 248 aa16.42■□□□□ 0.22
COL11A2-201ENST00000341947 SLFN14P0C7P3 912 aa16.42■□□□□ 0.22
COL11A2-201ENST00000341947 EIF2AK2P19525 551 aaKnown RBP16.42■□□□□ 0.22
COL11A2-201ENST00000341947 DHX38Q92620 1227 aaKnown RBP16.42■□□□□ 0.22
COL11A2-201ENST00000341947 COA1Q9GZY4 146 aa16.42■□□□□ 0.22
COL11A2-201ENST00000341947 MRPL46Q9H2W6 279 aaKnown RBP16.42■□□□□ 0.22
COL11A2-201ENST00000341947 ATF5Q9Y2D1 282 aaPredicted RBP16.42■□□□□ 0.22
COL11A2-201ENST00000341947 TOM1L1O75674 476 aa16.42■□□□□ 0.22
COL11A2-201ENST00000341947 SERPING1P05155 500 aa16.42■□□□□ 0.22
COL11A2-201ENST00000341947 RNF207Q6ZRF8 634 aa16.42■□□□□ 0.22
COL11A2-201ENST00000341947 FOXP4Q8IVH2 680 aaPredicted RBP16.42■□□□□ 0.22
COL11A2-201ENST00000341947 EPB41L5Q9HCM4 733 aa16.42■□□□□ 0.22
COL11A2-201ENST00000341947 SLC13A4Q9UKG4 626 aa16.42■□□□□ 0.22
COL11A2-201ENST00000341947 ADCK5Q3MIX3 580 aa16.42■□□□□ 0.22
COL11A2-201ENST00000341947 TCP11X2Q5H9J9 407 aa16.42■□□□□ 0.22
COL11A2-201ENST00000341947 BZW1Q7L1Q6 419 aaKnown RBP16.42■□□□□ 0.22
COL11A2-201ENST00000341947 PRPF38AQ8NAV1 312 aaKnown RBP16.42■□□□□ 0.22
COL11A2-201ENST00000341947 RNF217Q8TC41 542 aa16.42■□□□□ 0.22
COL11A2-201ENST00000341947 ZNF341Q9BYN7 854 aa16.42■□□□□ 0.22
COL11A2-201ENST00000341947 KIF23Q02241 960 aaPredicted RBP16.42■□□□□ 0.22
COL11A2-201ENST00000341947 KCTD16Q68DU8 428 aa16.42■□□□□ 0.22
COL11A2-201ENST00000341947 KLC3Q6P597 504 aa16.42■□□□□ 0.22
COL11A2-201ENST00000341947 NLRP10Q86W26 655 aa16.42■□□□□ 0.22
COL11A2-201ENST00000341947 WHAMMQ8TF30 809 aa16.42■□□□□ 0.22
COL11A2-201ENST00000341947 CHEK2O96017 543 aa16.41■□□□□ 0.22
COL11A2-201ENST00000341947 MECOMQ03112 1051 aa16.41■□□□□ 0.22
COL11A2-201ENST00000341947 EFHD1Q9BUP0 239 aa16.41■□□□□ 0.22
COL11A2-201ENST00000341947 LUC7L3O95232 432 aaKnown RBP16.41■□□□□ 0.22
COL11A2-201ENST00000341947 GNAT1P11488 350 aa16.41■□□□□ 0.22
COL11A2-201ENST00000341947 JAK3P52333 1124 aa16.41■□□□□ 0.22
COL11A2-201ENST00000341947 ADCY1Q08828 1119 aa16.41■□□□□ 0.22
COL11A2-201ENST00000341947 ZNF589Q86UQ0 364 aaPredicted RBP16.41■□□□□ 0.22
COL11A2-201ENST00000341947 ELMOD1Q8N336 334 aa16.41■□□□□ 0.22
COL11A2-201ENST00000341947 CDC26Q8NHZ8 85 aa16.41■□□□□ 0.22
COL11A2-201ENST00000341947 ATP8A1Q9Y2Q0 1164 aa16.41■□□□□ 0.22
COL11A2-201ENST00000341947 ZBED1O96006 694 aa16.41■□□□□ 0.22
COL11A2-201ENST00000341947 CTTNQ14247 550 aaKnown RBP16.41■□□□□ 0.22
COL11A2-201ENST00000341947 CATSPER4Q7RTX7 472 aa16.41■□□□□ 0.22
COL11A2-201ENST00000341947 OR6B3Q8NGW1 331 aa16.41■□□□□ 0.22
Retrieved 100 of 20,778 RNA–protein pairs in 14.1 ms