RNA–Protein interactions for RNA: ENST00000341529.7

CDH5-201, Transcript of cadherin 5, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CDH5, Length 4,120 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH5-201ENST00000341529 USP32Q8NFA0 1604 aa13.05□□□□□ -0.32
CDH5-201ENST00000341529 FLT1P17948 1338 aa13.05□□□□□ -0.32
CDH5-201ENST00000341529 FOSP01100 380 aaPredicted RBP13.05□□□□□ -0.32
CDH5-201ENST00000341529 NYAP1Q6ZVC0 841 aa13.05□□□□□ -0.32
CDH5-201ENST00000341529 FBXO33Q7Z6M2 555 aa13.05□□□□□ -0.32
CDH5-201ENST00000341529 ANKS4BQ8N8V4 417 aa13.05□□□□□ -0.32
CDH5-201ENST00000341529 FAM71BQ8TC56 605 aa13.05□□□□□ -0.32
CDH5-201ENST00000341529 COA1Q9GZY4 146 aa13.05□□□□□ -0.32
CDH5-201ENST00000341529 ZNF277Q9NRM2 450 aaPredicted RBP13.05□□□□□ -0.32
CDH5-201ENST00000341529 SWAP70Q9UH65 585 aa13.05□□□□□ -0.32
CDH5-201ENST00000341529 SPATA31A5Q5VU36 1347 aa13.05□□□□□ -0.32
CDH5-201ENST00000341529 SPATA31A7Q8IWB4 1347 aa13.05□□□□□ -0.32
CDH5-201ENST00000341529 GCLMP48507 274 aa13.05□□□□□ -0.32
CDH5-201ENST00000341529 LIG4P49917 911 aa13.05□□□□□ -0.32
CDH5-201ENST00000341529 EAPPQ56P03 285 aaPredicted RBP13.05□□□□□ -0.32
CDH5-201ENST00000341529 NAP1L3Q99457 506 aaPredicted RBP13.05□□□□□ -0.32
CDH5-201ENST00000341529 METTL14Q9HCE5 456 aaKnown RBP13.05□□□□□ -0.32
CDH5-201ENST00000341529 ZBTB12Q9Y330 459 aaPredicted RBP13.05□□□□□ -0.32
CDH5-201ENST00000341529 A0A087X0B3 334 aa13.05□□□□□ -0.32
CDH5-201ENST00000341529 PDCLQ13371 301 aa13.05□□□□□ -0.32
CDH5-201ENST00000341529 BSPRYQ5W0U4 402 aa13.05□□□□□ -0.32
CDH5-201ENST00000341529 PPP1R21Q6ZMI0 780 aa13.05□□□□□ -0.32
CDH5-201ENST00000341529 ADSSL1Q8N142 457 aa13.05□□□□□ -0.32
CDH5-201ENST00000341529 ANKRD35Q8N283 1001 aa13.05□□□□□ -0.32
CDH5-201ENST00000341529 ZNF341Q9BYN7 854 aa13.05□□□□□ -0.32
CDH5-201ENST00000341529 AGXT2Q9BYV1 514 aa13.05□□□□□ -0.32
CDH5-201ENST00000341529 MAGEF1Q9HAY2 307 aa13.05□□□□□ -0.32
CDH5-201ENST00000341529 SBDSQ9Y3A5 250 aaKnown RBP eCLIP13.05□□□□□ -0.32
CDH5-201ENST00000341529 CAPN7Q9Y6W3 813 aa13.05□□□□□ -0.32
CDH5-201ENST00000341529 TBC1D8O95759 1140 aa13.04□□□□□ -0.32
CDH5-201ENST00000341529 FGFR2P21802 821 aa13.04□□□□□ -0.32
CDH5-201ENST00000341529 SSTR3P32745 418 aaPredicted RBP13.04□□□□□ -0.32
CDH5-201ENST00000341529 PEX3P56589 373 aa13.04□□□□□ -0.32
CDH5-201ENST00000341529 KCTD19Q17RG1 926 aaPredicted RBP13.04□□□□□ -0.32
CDH5-201ENST00000341529 DENND2CQ68D51 928 aa13.04□□□□□ -0.32
CDH5-201ENST00000341529 RBM43Q6ZSC3 357 aaKnown RBP13.04□□□□□ -0.32
CDH5-201ENST00000341529 SYCE1Q8N0S2 351 aa13.04□□□□□ -0.32
CDH5-201ENST00000341529 DEPTORQ8TB45 409 aa13.04□□□□□ -0.32
CDH5-201ENST00000341529 RAD54LQ92698 747 aa13.04□□□□□ -0.32
CDH5-201ENST00000341529 CNKSR1Q969H4 720 aa13.04□□□□□ -0.32
CDH5-201ENST00000341529 DDX47Q9H0S4 455 aaKnown RBP13.04□□□□□ -0.32
CDH5-201ENST00000341529 CHORDC1Q9UHD1 332 aaPredicted RBP13.04□□□□□ -0.32
CDH5-201ENST00000341529 TSKSQ9UJT2 592 aa13.04□□□□□ -0.32
CDH5-201ENST00000341529 PPP1R3GB7ZBB8 358 aa13.04□□□□□ -0.32
CDH5-201ENST00000341529 ATP2A1O14983 1001 aa13.04□□□□□ -0.32
CDH5-201ENST00000341529 RGS16O15492 202 aaPredicted RBP13.04□□□□□ -0.32
CDH5-201ENST00000341529 GCFC2P16383 781 aaKnown RBP13.04□□□□□ -0.32
CDH5-201ENST00000341529 KRT15P19012 456 aa13.04□□□□□ -0.32
CDH5-201ENST00000341529 PSMC2P35998 433 aaKnown RBP13.04□□□□□ -0.32
CDH5-201ENST00000341529 RUFY4Q6ZNE9 571 aa13.04□□□□□ -0.32
CDH5-201ENST00000341529 REXO1L1PQ8IX06 675 aa13.04□□□□□ -0.32
CDH5-201ENST00000341529 PARVGQ9HBI0 331 aa13.04□□□□□ -0.32
CDH5-201ENST00000341529 MTMR4Q9NYA4 1195 aa13.04□□□□□ -0.32
CDH5-201ENST00000341529 A0A0U1RQJ8 604 aa13.04□□□□□ -0.32
CDH5-201ENST00000341529 NMT1P30419 496 aaKnown RBP13.04□□□□□ -0.32
CDH5-201ENST00000341529 ZKSCAN8Q15776 578 aaPredicted RBP13.04□□□□□ -0.32
CDH5-201ENST00000341529 CCDC170Q8IYT3 715 aa13.04□□□□□ -0.32
CDH5-201ENST00000341529 CEP170P1Q96L14 293 aa13.04□□□□□ -0.32
CDH5-201ENST00000341529 SEPT9Q9UHD8 586 aaPredicted RBP13.04□□□□□ -0.32
CDH5-201ENST00000341529 EXOC7Q9UPT5 735 aa13.04□□□□□ -0.32
CDH5-201ENST00000341529 HPSEQ9Y251 543 aa13.04□□□□□ -0.32
CDH5-201ENST00000341529 MXRA7P84157 204 aa13.03□□□□□ -0.32
CDH5-201ENST00000341529 DHX9Q08211 1270 aaKnown RBP13.03□□□□□ -0.32
CDH5-201ENST00000341529 NFIAQ12857 509 aa13.03□□□□□ -0.32
CDH5-201ENST00000341529 CCDC6Q16204 474 aa13.03□□□□□ -0.32
CDH5-201ENST00000341529 ZNF394Q53GI3 561 aa13.03□□□□□ -0.32
CDH5-201ENST00000341529 DYDC2Q96IM9 177 aa13.03□□□□□ -0.32
CDH5-201ENST00000341529 NBPF3Q9H094 633 aa13.03□□□□□ -0.32
CDH5-201ENST00000341529 NKIRAS1Q9NYS0 192 aa13.03□□□□□ -0.32
CDH5-201ENST00000341529 TCRBV5S4A2TA0A5A2 114 aa13.03□□□□□ -0.32
CDH5-201ENST00000341529 GGCXP38435 758 aa13.03□□□□□ -0.32
CDH5-201ENST00000341529 ADCY8P40145 1251 aa13.03□□□□□ -0.32
CDH5-201ENST00000341529 LRRC63Q05C16 580 aa13.03□□□□□ -0.32
CDH5-201ENST00000341529 IFT88Q13099 833 aa13.03□□□□□ -0.32
CDH5-201ENST00000341529 SEPT14Q6ZU15 432 aa13.03□□□□□ -0.32
CDH5-201ENST00000341529 ZNF653Q96CK0 615 aa13.03□□□□□ -0.32
CDH5-201ENST00000341529 N4BP1O75113 896 aaKnown RBP13.03□□□□□ -0.32
CDH5-201ENST00000341529 VPS72Q15906 364 aa13.03□□□□□ -0.32
CDH5-201ENST00000341529 PKN1Q16512 942 aa13.03□□□□□ -0.32
CDH5-201ENST00000341529 MTERF2Q49AM1 385 aa13.03□□□□□ -0.32
CDH5-201ENST00000341529 NSRP1Q9H0G5 558 aaKnown RBP13.03□□□□□ -0.32
CDH5-201ENST00000341529 VPS37BQ9H9H4 285 aa13.03□□□□□ -0.32
CDH5-201ENST00000341529 MED4Q9NPJ6 270 aa13.03□□□□□ -0.32
CDH5-201ENST00000341529 TBK1Q9UHD2 729 aa13.03□□□□□ -0.32
CDH5-201ENST00000341529 STXBP3O00186 592 aa13.03□□□□□ -0.32
CDH5-201ENST00000341529 SEC23AQ15436 765 aa13.03□□□□□ -0.32
CDH5-201ENST00000341529 CYP4F22Q6NT55 531 aa13.03□□□□□ -0.32
CDH5-201ENST00000341529 ZNF354CQ86Y25 554 aa13.03□□□□□ -0.32
CDH5-201ENST00000341529 VTI1AQ96AJ9 217 aa13.03□□□□□ -0.32
CDH5-201ENST00000341529 SH3GLB2Q9NR46 395 aa13.03□□□□□ -0.32
CDH5-201ENST00000341529 LIMA1Q9UHB6 759 aaKnown RBP13.03□□□□□ -0.32
CDH5-201ENST00000341529 FGGP02679 453 aa13.02□□□□□ -0.32
CDH5-201ENST00000341529 PRAMEF18Q5VWM3 479 aa13.02□□□□□ -0.32
CDH5-201ENST00000341529 ANKRD7Q92527 254 aa13.02□□□□□ -0.32
CDH5-201ENST00000341529 ZNF512BQ96KM6 892 aaPredicted RBP13.02□□□□□ -0.32
CDH5-201ENST00000341529 RAVER2Q9HCJ3 691 aaKnown RBP13.02□□□□□ -0.32
CDH5-201ENST00000341529 BAIAP2L1Q9UHR4 511 aa13.02□□□□□ -0.32
CDH5-201ENST00000341529 ABCB11O95342 1321 aa13.02□□□□□ -0.32
CDH5-201ENST00000341529 SERPING1P05155 500 aa13.02□□□□□ -0.33
CDH5-201ENST00000341529 NNTQ13423 1086 aa13.02□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 13.6 ms