RNA–Protein interactions for RNA: ENST00000341455.10

CCDC66-202, Transcript of coiled-coil domain containing 66, humanhuman

TSL 1 (best)

Gene CCDC66, Length 3,042 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC66-202ENST00000341455 IGBP1P78318 339 aa4.04□□□□□ -1.76
CCDC66-202ENST00000341455 FANCCQ00597 558 aa4.04□□□□□ -1.76
CCDC66-202ENST00000341455 NHLH1Q02575 133 aa4.04□□□□□ -1.76
CCDC66-202ENST00000341455 TCEAL1Q15170 157 aa4.04□□□□□ -1.76
CCDC66-202ENST00000341455 SHROOM1Q2M3G4 852 aaPredicted RBP4.04□□□□□ -1.76
CCDC66-202ENST00000341455 MOXD1Q6UVY6 613 aa4.04□□□□□ -1.76
CCDC66-202ENST00000341455 MOB2Q70IA6 237 aa4.04□□□□□ -1.76
CCDC66-202ENST00000341455 NIPA1Q7RTP0 329 aa4.04□□□□□ -1.76
CCDC66-202ENST00000341455 RNF135Q8IUD6 432 aa4.04□□□□□ -1.76
CCDC66-202ENST00000341455 ZNF654Q8IZM8 581 aa4.04□□□□□ -1.76
CCDC66-202ENST00000341455 CLEC4DQ8WXI8 215 aa4.04□□□□□ -1.76
CCDC66-202ENST00000341455 PRIMPOLQ96LW4 560 aa4.04□□□□□ -1.76
CCDC66-202ENST00000341455 FGD4Q96M96 766 aa4.04□□□□□ -1.76
CCDC66-202ENST00000341455 APBA2Q99767 749 aa4.04□□□□□ -1.76
CCDC66-202ENST00000341455 KATNBL1Q9H079 304 aa4.04□□□□□ -1.76
CCDC66-202ENST00000341455 UPF3AQ9H1J1 476 aaKnown RBP4.04□□□□□ -1.76
CCDC66-202ENST00000341455 ACBD3Q9H3P7 528 aa4.04□□□□□ -1.76
CCDC66-202ENST00000341455 ZSWIM4Q9H7M6 989 aa4.04□□□□□ -1.76
CCDC66-202ENST00000341455 FBXO40Q9UH90 709 aa4.04□□□□□ -1.76
CCDC66-202ENST00000341455 PCDHA11Q9Y5I1 949 aa4.04□□□□□ -1.76
CCDC66-202ENST00000341455 ZHX2Q9Y6X8 837 aa4.04□□□□□ -1.76
CCDC66-202ENST00000341455 CCDC196A0A1B0GTZ2 297 aa4.04□□□□□ -1.76
CCDC66-202ENST00000341455 TSPY2A6NKD2 308 aa4.04□□□□□ -1.76
CCDC66-202ENST00000341455 B4E1Z4 1266 aa4.04□□□□□ -1.76
CCDC66-202ENST00000341455 OPLAHO14841 1288 aa4.04□□□□□ -1.76
CCDC66-202ENST00000341455 TPD52L2O43399 206 aaKnown RBP4.04□□□□□ -1.76
CCDC66-202ENST00000341455 SLC26A4O43511 780 aa4.04□□□□□ -1.76
CCDC66-202ENST00000341455 PDIA3P30101 505 aaKnown RBP4.04□□□□□ -1.76
CCDC66-202ENST00000341455 KIF5BP33176 963 aa4.04□□□□□ -1.76
CCDC66-202ENST00000341455 STAT2P52630 851 aa4.04□□□□□ -1.76
CCDC66-202ENST00000341455 HERVK_113P62684 666 aa4.04□□□□□ -1.76
CCDC66-202ENST00000341455 TRDNQ13061 729 aa4.04□□□□□ -1.76
CCDC66-202ENST00000341455 WTAPQ15007 396 aa4.04□□□□□ -1.76
CCDC66-202ENST00000341455 MTFR1Q15390 333 aa4.04□□□□□ -1.76
CCDC66-202ENST00000341455 ZNF792Q3KQV3 632 aa4.04□□□□□ -1.76
CCDC66-202ENST00000341455 SYDE2Q5VT97 1194 aa4.04□□□□□ -1.76
CCDC66-202ENST00000341455 ZNF385CQ66K41 422 aaPredicted RBP4.04□□□□□ -1.76
CCDC66-202ENST00000341455 SLFN13Q68D06 897 aa4.04□□□□□ -1.76
CCDC66-202ENST00000341455 BLOC1S2Q6QNY1 142 aa4.04□□□□□ -1.76
CCDC66-202ENST00000341455 DLK2Q6UY11 383 aa4.04□□□□□ -1.76
CCDC66-202ENST00000341455 SKAP1Q86WV1 359 aa4.04□□□□□ -1.76
CCDC66-202ENST00000341455 PHOSPHO2Q8TCD6 241 aa4.04□□□□□ -1.76
CCDC66-202ENST00000341455 TNFRSF25Q93038 417 aa4.04□□□□□ -1.76
CCDC66-202ENST00000341455 GTF3C6Q969F1 213 aa4.04□□□□□ -1.76
CCDC66-202ENST00000341455 COA7Q96BR5 231 aa4.04□□□□□ -1.76
CCDC66-202ENST00000341455 C22orf23Q9BZE7 217 aa4.04□□□□□ -1.76
CCDC66-202ENST00000341455 SEMA4AQ9H3S1 761 aa4.04□□□□□ -1.76
CCDC66-202ENST00000341455 RPAP3Q9H6T3 665 aaPredicted RBP4.04□□□□□ -1.76
CCDC66-202ENST00000341455 CCSER2Q9H7U1 834 aa4.04□□□□□ -1.76
CCDC66-202ENST00000341455 Q9Y3F1 56 aa4.04□□□□□ -1.76
CCDC66-202ENST00000341455 CYP46A1Q9Y6A2 500 aa4.04□□□□□ -1.76
CCDC66-202ENST00000341455 MYH7BA7E2Y1 1941 aa4.03□□□□□ -1.76
CCDC66-202ENST00000341455 PNMA6FA0A0J9YX94 578 aa4.03□□□□□ -1.76
CCDC66-202ENST00000341455 PARNO95453 639 aaKnown RBP4.03□□□□□ -1.76
CCDC66-202ENST00000341455 CYP3A4P08684 503 aa4.03□□□□□ -1.76
CCDC66-202ENST00000341455 DNAJA1P31689 397 aaKnown RBP4.03□□□□□ -1.76
CCDC66-202ENST00000341455 COL9A3Q14050 684 aaPredicted RBP4.03□□□□□ -1.76
CCDC66-202ENST00000341455 PFKFB3Q16875 520 aaPredicted RBP4.03□□□□□ -1.76
CCDC66-202ENST00000341455 IFIT1BQ5T764 474 aaKnown RBP4.03□□□□□ -1.76
CCDC66-202ENST00000341455 PSRC1Q6PGN9 363 aaPredicted RBP4.03□□□□□ -1.76
CCDC66-202ENST00000341455 MIGA2Q7L4E1 593 aa4.03□□□□□ -1.76
CCDC66-202ENST00000341455 RALYLQ86SE5 291 aaKnown RBP4.03□□□□□ -1.76
CCDC66-202ENST00000341455 DNERQ8NFT8 737 aa4.03□□□□□ -1.76
CCDC66-202ENST00000341455 KCNN1Q92952 543 aa4.03□□□□□ -1.76
CCDC66-202ENST00000341455 RNF208Q9H0X6 261 aa4.03□□□□□ -1.76
CCDC66-202ENST00000341455 JMJD4Q9H9V9 463 aa4.03□□□□□ -1.76
CCDC66-202ENST00000341455 SEPT3Q9UH03 358 aa4.03□□□□□ -1.76
CCDC66-202ENST00000341455 PRR12Q9ULL5 1215 aa4.03□□□□□ -1.76
CCDC66-202ENST00000341455 CYP3A7-CYP3A51PA0A087WV96 503 aa4.03□□□□□ -1.76
CCDC66-202ENST00000341455 FSD2A1L4K1 749 aa4.03□□□□□ -1.76
CCDC66-202ENST00000341455 DCDC2CA8MYV0 355 aa4.03□□□□□ -1.76
CCDC66-202ENST00000341455 MINDY4BA8MYZ0 360 aa4.03□□□□□ -1.76
CCDC66-202ENST00000341455 ZBTB5O15062 677 aa4.03□□□□□ -1.76
CCDC66-202ENST00000341455 NCK2O43639 380 aa4.03□□□□□ -1.76
CCDC66-202ENST00000341455 CYTH3O43739 400 aa4.03□□□□□ -1.76
CCDC66-202ENST00000341455 CYP3A7P24462 503 aa4.03□□□□□ -1.76
CCDC66-202ENST00000341455 ICAM3P32942 547 aa4.03□□□□□ -1.76
CCDC66-202ENST00000341455 ERVK-9P63128 1117 aa4.03□□□□□ -1.76
CCDC66-202ENST00000341455 ERVK-24P63145 666 aa4.03□□□□□ -1.76
CCDC66-202ENST00000341455 PRKCZQ05513 592 aa4.03□□□□□ -1.76
CCDC66-202ENST00000341455 RBL2Q08999 1139 aa4.03□□□□□ -1.76
CCDC66-202ENST00000341455 SPP2Q13103 211 aa4.03□□□□□ -1.76
CCDC66-202ENST00000341455 NPY5RQ15761 445 aa4.03□□□□□ -1.76
CCDC66-202ENST00000341455 CATIPQ7Z7H3 387 aa4.03□□□□□ -1.76
CCDC66-202ENST00000341455 C7orf61Q8IZ16 206 aa4.03□□□□□ -1.76
CCDC66-202ENST00000341455 FAM133AQ8N9E0 248 aa4.03□□□□□ -1.76
CCDC66-202ENST00000341455 FANCBQ8NB91 859 aa4.03□□□□□ -1.76
CCDC66-202ENST00000341455 ZFP42Q96MM3 310 aa4.03□□□□□ -1.76
CCDC66-202ENST00000341455 UBAC1Q9BSL1 405 aa4.03□□□□□ -1.76
CCDC66-202ENST00000341455 ZMYND12Q9H0C1 365 aa4.03□□□□□ -1.76
CCDC66-202ENST00000341455 KAT14Q9H8E8 782 aa4.03□□□□□ -1.76
CCDC66-202ENST00000341455 PRDM9Q9NQV7 894 aa4.03□□□□□ -1.76
CCDC66-202ENST00000341455 BTBD7Q9P203 1132 aa4.03□□□□□ -1.76
CCDC66-202ENST00000341455 BCCIPQ9P287 314 aaKnown RBP eCLIP4.03□□□□□ -1.76
CCDC66-202ENST00000341455 MSTNO14793 375 aa4.03□□□□□ -1.77
CCDC66-202ENST00000341455 PPP1R11O60927 126 aaPredicted RBP4.03□□□□□ -1.77
CCDC66-202ENST00000341455 DKK1O94907 266 aa4.03□□□□□ -1.77
CCDC66-202ENST00000341455 CTDNEP1O95476 244 aa4.03□□□□□ -1.77
CCDC66-202ENST00000341455 ADH1CP00326 375 aa4.03□□□□□ -1.77
CCDC66-202ENST00000341455 PARP1P09874 1014 aaKnown RBP4.03□□□□□ -1.77
Retrieved 100 of 20,778 RNA–protein pairs in 38.4 ms