RNA–Protein interactions for RNA: ENST00000340424.4

SIRPB3P-201, Transcript of signal regulatory protein beta 3, pseudogene, humanhuman

BASIC

Gene SIRPB3P, Length 1,216 nt, Biotype unprocessed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SIRPB3P-201ENST00000340424 STXBP5LQ9Y2K9 1186 aa15.21■□□□□ 0.03
SIRPB3P-201ENST00000340424 CDH23Q9H251 3354 aa15.21■□□□□ 0.03
SIRPB3P-201ENST00000340424 COL6A3P12111 3177 aa15.21■□□□□ 0.03
SIRPB3P-201ENST00000340424 MEIS1O00470 390 aa15.2■□□□□ 0.02
SIRPB3P-201ENST00000340424 ATP9AO75110 1047 aa15.2■□□□□ 0.02
SIRPB3P-201ENST00000340424 BAIAP3O94812 1187 aa15.2■□□□□ 0.02
SIRPB3P-201ENST00000340424 DEXIO95424 95 aa15.2■□□□□ 0.02
SIRPB3P-201ENST00000340424 CYP3A4P08684 503 aa15.2■□□□□ 0.02
SIRPB3P-201ENST00000340424 SMIM10L2AP0DMW4 78 aa15.2■□□□□ 0.02
SIRPB3P-201ENST00000340424 SMIM10L2BP0DMW5 78 aa15.2■□□□□ 0.02
SIRPB3P-201ENST00000340424 CKBP12277 381 aa15.2■□□□□ 0.02
SIRPB3P-201ENST00000340424 TCF7P36402 384 aaPredicted RBP15.2■□□□□ 0.02
SIRPB3P-201ENST00000340424 ZNF76P36508 570 aa15.2■□□□□ 0.02
SIRPB3P-201ENST00000340424 CCT2P78371 535 aaKnown RBP15.2■□□□□ 0.02
SIRPB3P-201ENST00000340424 ARHGAP4P98171 946 aa15.2■□□□□ 0.02
SIRPB3P-201ENST00000340424 SETQ01105 290 aaPredicted RBP15.2■□□□□ 0.02
SIRPB3P-201ENST00000340424 SSRP1Q08945 709 aaKnown RBP15.2■□□□□ 0.02
SIRPB3P-201ENST00000340424 RAB30Q15771 203 aa15.2■□□□□ 0.02
SIRPB3P-201ENST00000340424 LRRC8DQ7L1W4 858 aa15.2■□□□□ 0.02
SIRPB3P-201ENST00000340424 SERINC5Q86VE9 423 aa15.2■□□□□ 0.02
SIRPB3P-201ENST00000340424 PPP1R13LQ8WUF5 828 aa15.2■□□□□ 0.02
SIRPB3P-201ENST00000340424 TNPO1Q92973 898 aaKnown RBP15.2■□□□□ 0.02
SIRPB3P-201ENST00000340424 C22orf23Q9BZE7 217 aa15.2■□□□□ 0.02
SIRPB3P-201ENST00000340424 BCAS3Q9H6U6 928 aa15.2■□□□□ 0.02
SIRPB3P-201ENST00000340424 ERAP1Q9NZ08 941 aa15.2■□□□□ 0.02
SIRPB3P-201ENST00000340424 SLC4A7Q9Y6M7 1214 aa15.2■□□□□ 0.02
SIRPB3P-201ENST00000340424 EMSYQ7Z589 1322 aa15.19■□□□□ 0.02
SIRPB3P-201ENST00000340424 NRCAMQ92823 1304 aa15.19■□□□□ 0.02
SIRPB3P-201ENST00000340424 DOCK5Q9H7D0 1870 aa15.19■□□□□ 0.02
SIRPB3P-201ENST00000340424 DNAJB2P25686 324 aa15.19■□□□□ 0.02
SIRPB3P-201ENST00000340424 SP4Q02446 784 aa15.19■□□□□ 0.02
SIRPB3P-201ENST00000340424 JAKMIP3Q5VZ66 844 aa15.19■□□□□ 0.02
SIRPB3P-201ENST00000340424 GALNT17Q6IS24 598 aa15.19■□□□□ 0.02
SIRPB3P-201ENST00000340424 OTOP2Q7RTS6 562 aa15.19■□□□□ 0.02
SIRPB3P-201ENST00000340424 CRYGNQ8WXF5 182 aa15.19■□□□□ 0.02
SIRPB3P-201ENST00000340424 DHX38Q92620 1227 aaKnown RBP15.19■□□□□ 0.02
SIRPB3P-201ENST00000340424 ATP6V0A1Q93050 837 aa15.19■□□□□ 0.02
SIRPB3P-201ENST00000340424 SMARCAD1Q9H4L7 1026 aa15.19■□□□□ 0.02
SIRPB3P-201ENST00000340424 NCOA5Q9HCD5 579 aaKnown RBP15.19■□□□□ 0.02
SIRPB3P-201ENST00000340424 TMEM260Q9NX78 707 aa15.19■□□□□ 0.02
SIRPB3P-201ENST00000340424 SLC9A2Q9UBY0 812 aa15.19■□□□□ 0.02
SIRPB3P-201ENST00000340424 C19orf67A6NJJ6 358 aa15.18■□□□□ 0.02
SIRPB3P-201ENST00000340424 RIOK3O14730 519 aaKnown RBP15.18■□□□□ 0.02
SIRPB3P-201ENST00000340424 RPLP2P05387 115 aaKnown RBP15.18■□□□□ 0.02
SIRPB3P-201ENST00000340424 UTP14CQ5TAP6 766 aaKnown RBP15.18■□□□□ 0.02
SIRPB3P-201ENST00000340424 DEFB128Q7Z7B8 93 aa15.18■□□□□ 0.02
SIRPB3P-201ENST00000340424 PHOSPHO2Q8TCD6 241 aa15.18■□□□□ 0.02
SIRPB3P-201ENST00000340424 TIFAQ96CG3 184 aa15.18■□□□□ 0.02
SIRPB3P-201ENST00000340424 VWCEQ96DN2 955 aa15.18■□□□□ 0.02
SIRPB3P-201ENST00000340424 PGBD1Q96JS3 809 aa15.18■□□□□ 0.02
SIRPB3P-201ENST00000340424 SLC9A7Q96T83 725 aa15.18■□□□□ 0.02
SIRPB3P-201ENST00000340424 FTOQ9C0B1 505 aaKnown RBP eCLIP15.18■□□□□ 0.02
SIRPB3P-201ENST00000340424 SEMA6BQ9H3T3 888 aa15.18■□□□□ 0.02
SIRPB3P-201ENST00000340424 RNPEPQ9H4A4 650 aa15.18■□□□□ 0.02
SIRPB3P-201ENST00000340424 AZI2Q9H6S1 392 aa15.18■□□□□ 0.02
SIRPB3P-201ENST00000340424 AGO4Q9HCK5 861 aaKnown RBP15.18■□□□□ 0.02
SIRPB3P-201ENST00000340424 CXXC1Q9P0U4 656 aaPredicted RBP15.18■□□□□ 0.02
SIRPB3P-201ENST00000340424 MSRAQ9UJ68 235 aa15.18■□□□□ 0.02
SIRPB3P-201ENST00000340424 GSTTP1A0A1W2PQM5 241 aa15.17■□□□□ 0.02
SIRPB3P-201ENST00000340424 ZBBXA8MT70 800 aa15.17■□□□□ 0.02
SIRPB3P-201ENST00000340424 EFCAB14O75071 495 aa15.17■□□□□ 0.02
SIRPB3P-201ENST00000340424 CXCL10P02778 98 aa15.17■□□□□ 0.02
SIRPB3P-201ENST00000340424 SLC26A2P50443 739 aa15.17■□□□□ 0.02
SIRPB3P-201ENST00000340424 TRIM71Q2Q1W2 868 aaKnown RBP15.17■□□□□ 0.02
SIRPB3P-201ENST00000340424 CNKSR3Q6P9H4 555 aa15.17■□□□□ 0.02
SIRPB3P-201ENST00000340424 TRIM50Q86XT4 487 aa15.17■□□□□ 0.02
SIRPB3P-201ENST00000340424 CYP2W1Q8TAV3 490 aa15.17■□□□□ 0.02
SIRPB3P-201ENST00000340424 GLG1Q92896 1179 aa15.17■□□□□ 0.02
SIRPB3P-201ENST00000340424 PBX4Q9BYU1 374 aa15.17■□□□□ 0.02
SIRPB3P-201ENST00000340424 SLKQ9H2G2 1235 aaPredicted RBP15.17■□□□□ 0.02
SIRPB3P-201ENST00000340424 VPS54Q9P1Q0 977 aa15.17■□□□□ 0.02
SIRPB3P-201ENST00000340424 STK36Q9NRP7 1315 aa15.17■□□□□ 0.02
SIRPB3P-201ENST00000340424 SCN5AQ14524 2016 aa15.16■□□□□ 0.02
SIRPB3P-201ENST00000340424 PFKFB2O60825 505 aa15.16■□□□□ 0.02
SIRPB3P-201ENST00000340424 LGR5O75473 907 aa15.16■□□□□ 0.02
SIRPB3P-201ENST00000340424 ARP10275 920 aa15.16■□□□□ 0.02
SIRPB3P-201ENST00000340424 ATP2A2P16615 1042 aaKnown RBP15.16■□□□□ 0.02
SIRPB3P-201ENST00000340424 XBP1P17861 261 aa15.16■□□□□ 0.02
SIRPB3P-201ENST00000340424 CIITAP33076 1130 aa15.16■□□□□ 0.02
SIRPB3P-201ENST00000340424 THPOP40225 353 aa15.16■□□□□ 0.02
SIRPB3P-201ENST00000340424 NLRP5P59047 1200 aa15.16■□□□□ 0.02
SIRPB3P-201ENST00000340424 ADAM17P78536 824 aa15.16■□□□□ 0.02
SIRPB3P-201ENST00000340424 STK3Q13188 491 aa15.16■□□□□ 0.02
SIRPB3P-201ENST00000340424 TAF2Q6P1X5 1199 aa15.16■□□□□ 0.02
SIRPB3P-201ENST00000340424 PLPPR4Q7Z2D5 763 aa15.16■□□□□ 0.02
SIRPB3P-201ENST00000340424 PLA2G4DQ86XP0 818 aa15.16■□□□□ 0.02
SIRPB3P-201ENST00000340424 LMBR1Q8WVP7 490 aa15.16■□□□□ 0.02
SIRPB3P-201ENST00000340424 GUCD1Q96NT3 240 aa15.16■□□□□ 0.02
SIRPB3P-201ENST00000340424 TTYH1Q9H313 450 aaPredicted RBP15.16■□□□□ 0.02
SIRPB3P-201ENST00000340424 TBC1D22BQ9NU19 505 aa15.16■□□□□ 0.02
SIRPB3P-201ENST00000340424 PKD2L1Q9P0L9 805 aa15.16■□□□□ 0.02
SIRPB3P-201ENST00000340424 TCEAL9Q9UHQ7 104 aa15.16■□□□□ 0.02
SIRPB3P-201ENST00000340424 PCDHA4Q9UN74 947 aa15.16■□□□□ 0.02
SIRPB3P-201ENST00000340424 TRIP12Q14669 1992 aaPredicted RBP15.16■□□□□ 0.02
SIRPB3P-201ENST00000340424 IGLV3-22A0A075B6J6 115 aa15.15■□□□□ 0.02
SIRPB3P-201ENST00000340424 ABHD14A-ACY1A0A1B0GW23 586 aa15.15■□□□□ 0.02
SIRPB3P-201ENST00000340424 RRN3P2A6NIE6 340 aa15.15■□□□□ 0.02
SIRPB3P-201ENST00000340424 RSPH10B2B2RC85 870 aa15.15■□□□□ 0.02
SIRPB3P-201ENST00000340424 FAM86B1E9PN63 330 aa15.15■□□□□ 0.02
SIRPB3P-201ENST00000340424 IPO5O00410 1097 aaKnown RBP15.15■□□□□ 0.02
Retrieved 100 of 20,778 RNA–protein pairs in 15.2 ms