RNA–Protein interactions for RNA: ENST00000339647.5

UBC-201, Transcript of ubiquitin C, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene UBC, Length 2,688 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBC-201ENST00000339647 KLHL30Q0D2K2 578 aa22.08■■□□□ 1.12
UBC-201ENST00000339647 LRCH2Q5VUJ6 765 aa22.08■■□□□ 1.12
UBC-201ENST00000339647 ARMC9Q7Z3E5 817 aa22.08■■□□□ 1.12
UBC-201ENST00000339647 TMC3Q7Z5M5 1100 aa22.08■■□□□ 1.12
UBC-201ENST00000339647 DZIP3Q86Y13 1208 aaKnown RBP22.08■■□□□ 1.12
UBC-201ENST00000339647 ZNF34Q8IZ26 560 aa22.08■■□□□ 1.12
UBC-201ENST00000339647 CUL5Q93034 780 aa22.08■■□□□ 1.12
UBC-201ENST00000339647 CHMP6Q96FZ7 201 aa22.08■■□□□ 1.12
UBC-201ENST00000339647 SLC4A9Q96Q91 983 aa22.08■■□□□ 1.12
UBC-201ENST00000339647 XPO6Q96QU8 1125 aaKnown RBP22.08■■□□□ 1.12
UBC-201ENST00000339647 PSMD1Q99460 953 aa22.08■■□□□ 1.12
UBC-201ENST00000339647 DCP1AQ9NPI6 582 aaPredicted RBP22.08■■□□□ 1.12
UBC-201ENST00000339647 SLIT2O94813 1529 aa22.08■■□□□ 1.12
UBC-201ENST00000339647 IGHMBP2P38935 993 aaKnown RBP22.07■■□□□ 1.12
UBC-201ENST00000339647 DHX9Q08211 1270 aaKnown RBP22.07■■□□□ 1.12
UBC-201ENST00000339647 DAGLBQ8NCG7 672 aa22.07■■□□□ 1.12
UBC-201ENST00000339647 TCP11Q8WWU5 503 aa22.07■■□□□ 1.12
UBC-201ENST00000339647 SYN2Q92777 582 aaPredicted RBP22.07■■□□□ 1.12
UBC-201ENST00000339647 TRIM6Q9C030 488 aaPredicted RBP22.07■■□□□ 1.12
UBC-201ENST00000339647 CPVLQ9H3G5 476 aa22.07■■□□□ 1.12
UBC-201ENST00000339647 MAD2L2Q9UI95 211 aa22.07■■□□□ 1.12
UBC-201ENST00000339647 CACNA1SQ13698 1873 aa22.07■■□□□ 1.12
UBC-201ENST00000339647 CTNND1O60716 968 aaKnown RBP22.07■■□□□ 1.12
UBC-201ENST00000339647 TXKP42681 527 aa22.07■■□□□ 1.12
UBC-201ENST00000339647 USP11P51784 963 aa22.07■■□□□ 1.12
UBC-201ENST00000339647 NAIF1Q69YI7 327 aaPredicted RBP22.07■■□□□ 1.12
UBC-201ENST00000339647 CELF4Q9BZC1 486 aaKnown RBP22.07■■□□□ 1.12
UBC-201ENST00000339647 DPH5Q9H2P9 285 aa22.07■■□□□ 1.12
UBC-201ENST00000339647 IL17RBQ9NRM6 502 aa22.07■■□□□ 1.12
UBC-201ENST00000339647 BARHL2Q9NY43 387 aa22.07■■□□□ 1.12
UBC-201ENST00000339647 PNMA2Q9UL42 364 aa22.07■■□□□ 1.12
UBC-201ENST00000339647 NOC2LQ9Y3T9 749 aaKnown RBP22.07■■□□□ 1.12
UBC-201ENST00000339647 CYP19A1P11511 503 aaPredicted RBP22.06■■□□□ 1.12
UBC-201ENST00000339647 MTMR3Q13615 1198 aa22.06■■□□□ 1.12
UBC-201ENST00000339647 ERMARDQ5T6L9 678 aa22.06■■□□□ 1.12
UBC-201ENST00000339647 METTL13Q8N6R0 699 aa22.06■■□□□ 1.12
UBC-201ENST00000339647 CCDC197Q8NCU1 140 aa22.06■■□□□ 1.12
UBC-201ENST00000339647 ACTRT1Q8TDG2 376 aa22.06■■□□□ 1.12
UBC-201ENST00000339647 P3H4Q92791 437 aa22.06■■□□□ 1.12
UBC-201ENST00000339647 THOC1Q96FV9 657 aaKnown RBP22.06■■□□□ 1.12
UBC-201ENST00000339647 KAT6BQ8WYB5 2073 aa22.06■■□□□ 1.12
UBC-201ENST00000339647 MYH4Q9Y623 1939 aa22.06■■□□□ 1.12
UBC-201ENST00000339647 F8VZ95 297 aa22.06■■□□□ 1.12
UBC-201ENST00000339647 TTI1O43156 1089 aa22.06■■□□□ 1.12
UBC-201ENST00000339647 CLTAP09496 248 aa22.06■■□□□ 1.12
UBC-201ENST00000339647 NBPF9Q3BBW0 867 aa22.06■■□□□ 1.12
UBC-201ENST00000339647 PNMA5Q96PV4 448 aa22.06■■□□□ 1.12
UBC-201ENST00000339647 NUCKS1Q9H1E3 243 aaKnown RBP22.06■■□□□ 1.12
UBC-201ENST00000339647 NUP98P52948 1817 aa22.05■■□□□ 1.12
UBC-201ENST00000339647 TRAF5O00463 557 aa22.05■■□□□ 1.12
UBC-201ENST00000339647 KRIT1O00522 736 aa22.05■■□□□ 1.12
UBC-201ENST00000339647 PPP1R12AO14974 1030 aaPredicted RBP22.05■■□□□ 1.12
UBC-201ENST00000339647 BUB1BO60566 1050 aaPredicted RBP22.05■■□□□ 1.12
UBC-201ENST00000339647 TFAP4Q01664 338 aa22.05■■□□□ 1.12
UBC-201ENST00000339647 MYO1EQ12965 1108 aa22.05■■□□□ 1.12
UBC-201ENST00000339647 NSMCE1Q8WV22 266 aa22.05■■□□□ 1.12
UBC-201ENST00000339647 PBKQ96KB5 322 aa22.05■■□□□ 1.12
UBC-201ENST00000339647 CARD10Q9BWT7 1032 aa22.05■■□□□ 1.12
UBC-201ENST00000339647 L3MBTL1Q9Y468 752 aa22.05■■□□□ 1.12
UBC-201ENST00000339647 COL4A3BPQ9Y5P4 624 aa22.05■■□□□ 1.12
UBC-201ENST00000339647 PVALEFA0A1B0GWK0 134 aa22.05■■□□□ 1.12
UBC-201ENST00000339647 CAND2O75155 1236 aa22.05■■□□□ 1.12
UBC-201ENST00000339647 PNMA8AQ86V59 439 aaPredicted RBP22.05■■□□□ 1.12
UBC-201ENST00000339647 TRIM31Q9BZY9 425 aa22.05■■□□□ 1.12
UBC-201ENST00000339647 PGRMC1O00264 195 aaKnown RBP22.04■■□□□ 1.12
UBC-201ENST00000339647 GOLGA8HP0CJ92 632 aa22.04■■□□□ 1.12
UBC-201ENST00000339647 TAX1BP1Q86VP1 789 aa22.04■■□□□ 1.12
UBC-201ENST00000339647 FMNL3Q8IVF7 1028 aa22.04■■□□□ 1.12
UBC-201ENST00000339647 CCDC63Q8NA47 563 aa22.04■■□□□ 1.12
UBC-201ENST00000339647 LARP4BQ92615 738 aaKnown RBP22.04■■□□□ 1.12
UBC-201ENST00000339647 TSG101Q99816 390 aa22.04■■□□□ 1.12
UBC-201ENST00000339647 FAM129AQ9BZQ8 928 aa22.04■■□□□ 1.12
UBC-201ENST00000339647 CES2O00748 559 aa22.04■■□□□ 1.12
UBC-201ENST00000339647 TBC1D1Q86TI0 1168 aaPredicted RBP22.04■■□□□ 1.12
UBC-201ENST00000339647 TBC1D22AQ8WUA7 517 aa22.04■■□□□ 1.12
UBC-201ENST00000339647 TLCD1Q96CP7 247 aa22.04■■□□□ 1.12
UBC-201ENST00000339647 ZNF317Q96PQ6 595 aaPredicted RBP22.04■■□□□ 1.12
UBC-201ENST00000339647 BUD13Q9BRD0 619 aaKnown RBP eCLIP22.04■■□□□ 1.12
UBC-201ENST00000339647 SWAP70Q9UH65 585 aa22.04■■□□□ 1.12
UBC-201ENST00000339647 ATP8A1Q9Y2Q0 1164 aa22.04■■□□□ 1.12
UBC-201ENST00000339647 ANKRD36CQ5JPF3 1778 aa22.04■■□□□ 1.12
UBC-201ENST00000339647 COL22A1Q8NFW1 1626 aaPredicted RBP22.04■■□□□ 1.12
UBC-201ENST00000339647 ZBTB48P10074 688 aaPredicted RBP22.03■■□□□ 1.12
UBC-201ENST00000339647 CHN1P15882 459 aa22.03■■□□□ 1.12
UBC-201ENST00000339647 GRM4Q14833 912 aa22.03■■□□□ 1.12
UBC-201ENST00000339647 NONOQ15233 471 aaKnown RBP eCLIP22.03■■□□□ 1.121e-7■■■■■ 29.7
UBC-201ENST00000339647 ASIC2Q16515 512 aa22.03■■□□□ 1.12
UBC-201ENST00000339647 RSRC1Q96IZ7 334 aaKnown RBP22.03■■□□□ 1.12
UBC-201ENST00000339647 ZNF804BA4D1E1 1349 aa22.03■■□□□ 1.12
UBC-201ENST00000339647 PTK2Q05397 1052 aa22.03■■□□□ 1.12
UBC-201ENST00000339647 LRRC57Q8N9N7 239 aa22.03■■□□□ 1.12
UBC-201ENST00000339647 DDX12PQ92771 950 aa22.03■■□□□ 1.12
UBC-201ENST00000339647 NUDT12Q9BQG2 462 aa22.03■■□□□ 1.12
UBC-201ENST00000339647 CASZ1Q86V15 1759 aa22.03■■□□□ 1.12
UBC-201ENST00000339647 DCCP43146 1447 aa22.03■■□□□ 1.12
UBC-201ENST00000339647 FAM133BQ5BKY9 247 aaKnown RBP22.03■■□□□ 1.12
UBC-201ENST00000339647 GALNT17Q6IS24 598 aa22.03■■□□□ 1.12
UBC-201ENST00000339647 KCNK18Q7Z418 384 aa22.03■■□□□ 1.12
UBC-201ENST00000339647 CALR3Q96L12 384 aaKnown RBP22.03■■□□□ 1.12
UBC-201ENST00000339647 A0A1B0GUL6 1792 aa22.02■■□□□ 1.12
Retrieved 100 of 20,778 RNA–protein pairs in 15.4 ms