RNA–Protein interactions for RNA: ENST00000338546.9

HPS1-202, Transcript of HPS1, biogenesis of lysosomal organelles complex 3 subunit 1, humanhuman

TSL 1 (best) BASIC

Gene HPS1, Length 1,580 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HPS1-202ENST00000338546 TRIM49BA6NDI0 452 aa18.07■□□□□ 0.48
HPS1-202ENST00000338546 SPDYE5A6NIY4 337 aa18.07■□□□□ 0.48
HPS1-202ENST00000338546 TPM2P07951 284 aa18.07■□□□□ 0.48
HPS1-202ENST00000338546 MRPS9P82933 396 aaKnown RBP18.07■□□□□ 0.48
HPS1-202ENST00000338546 PRKG1Q13976 671 aa18.07■□□□□ 0.48
HPS1-202ENST00000338546 BAATQ14032 418 aaPredicted RBP18.07■□□□□ 0.48
HPS1-202ENST00000338546 TRIM14Q14142 442 aa18.07■□□□□ 0.48
HPS1-202ENST00000338546 ARID5BQ14865 1188 aa18.07■□□□□ 0.48
HPS1-202ENST00000338546 ARHGEF16Q5VV41 709 aa18.07■□□□□ 0.48
HPS1-202ENST00000338546 NSMFQ6X4W1 530 aa18.07■□□□□ 0.48
HPS1-202ENST00000338546 SLC30A10Q6XR72 485 aa18.07■□□□□ 0.48
HPS1-202ENST00000338546 LBX2Q6XYB7 198 aa18.07■□□□□ 0.48
HPS1-202ENST00000338546 PRRT2Q7Z6L0 340 aaPredicted RBP18.07■□□□□ 0.48
HPS1-202ENST00000338546 WNK4Q96J92 1243 aa18.07■□□□□ 0.48
HPS1-202ENST00000338546 UIMC1Q96RL1 719 aa18.07■□□□□ 0.48
HPS1-202ENST00000338546 TSG101Q99816 390 aa18.07■□□□□ 0.48
HPS1-202ENST00000338546 UNC45AQ9H3U1 944 aa18.07■□□□□ 0.48
HPS1-202ENST00000338546 RIPK3Q9Y572 518 aa18.07■□□□□ 0.48
HPS1-202ENST00000338546 PCDHA2Q9Y5H9 948 aa18.07■□□□□ 0.48
HPS1-202ENST00000338546 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP18.07■□□□□ 0.48
HPS1-202ENST00000338546 LOC285556D6RIA3 1793 aa18.07■□□□□ 0.48
HPS1-202ENST00000338546 A0A1W2PQC6 194 aa18.06■□□□□ 0.48
HPS1-202ENST00000338546 DHX15O43143 795 aaKnown RBP18.06■□□□□ 0.48
HPS1-202ENST00000338546 GAP43P17677 238 aa18.06■□□□□ 0.48
HPS1-202ENST00000338546 CCND2P30279 289 aa18.06■□□□□ 0.48
HPS1-202ENST00000338546 PSMC6P62333 389 aa18.06■□□□□ 0.48
HPS1-202ENST00000338546 PPIL2Q13356 520 aa18.06■□□□□ 0.48
HPS1-202ENST00000338546 MTMR1Q13613 665 aa18.06■□□□□ 0.48
HPS1-202ENST00000338546 GIT2Q14161 759 aa18.06■□□□□ 0.48
HPS1-202ENST00000338546 VSIG10LQ86VR7 867 aa18.06■□□□□ 0.48
HPS1-202ENST00000338546 NSUN6Q8TEA1 469 aaKnown RBP18.06■□□□□ 0.48
HPS1-202ENST00000338546 GPRASP2Q96D09 838 aa18.06■□□□□ 0.48
HPS1-202ENST00000338546 SEMA6BQ9H3T3 888 aa18.06■□□□□ 0.48
HPS1-202ENST00000338546 FBXO40Q9UH90 709 aa18.06■□□□□ 0.48
HPS1-202ENST00000338546 KCNH4Q9UQ05 1017 aa18.06■□□□□ 0.48
HPS1-202ENST00000338546 TEX33O43247 280 aa18.05■□□□□ 0.48
HPS1-202ENST00000338546 PABPC4Q13310 644 aaKnown RBP eCLIP18.05■□□□□ 0.484e-7■■■□□ 17.1
HPS1-202ENST00000338546 GPR162Q16538 588 aa18.05■□□□□ 0.48
HPS1-202ENST00000338546 HERC4Q5GLZ8 1057 aaPredicted RBP18.05■□□□□ 0.48
HPS1-202ENST00000338546 PPP4R3CPQ6ZMV5 832 aa18.05■□□□□ 0.48
HPS1-202ENST00000338546 ARMC9Q7Z3E5 817 aa18.05■□□□□ 0.48
HPS1-202ENST00000338546 NLRX1Q86UT6 975 aa18.05■□□□□ 0.48
HPS1-202ENST00000338546 RDM1Q8NG50 284 aa18.05■□□□□ 0.48
HPS1-202ENST00000338546 IL31RAQ8NI17 732 aa18.05■□□□□ 0.48
HPS1-202ENST00000338546 CCDC51Q96ER9 411 aa18.05■□□□□ 0.48
HPS1-202ENST00000338546 DYDC2Q96IM9 177 aa18.05■□□□□ 0.48
HPS1-202ENST00000338546 TAF1DQ9H5J8 278 aaPredicted RBP18.05■□□□□ 0.48
HPS1-202ENST00000338546 RGL1Q9NZL6 768 aa18.05■□□□□ 0.48
HPS1-202ENST00000338546 LGALS16A8MUM7 142 aa18.04■□□□□ 0.48
HPS1-202ENST00000338546 IRF6O14896 467 aa18.04■□□□□ 0.48
HPS1-202ENST00000338546 CCP110O43303 1012 aa18.04■□□□□ 0.48
HPS1-202ENST00000338546 LYPLA2O95372 231 aa18.04■□□□□ 0.48
HPS1-202ENST00000338546 P4HBP07237 508 aaKnown RBP18.04■□□□□ 0.48
HPS1-202ENST00000338546 TPM1P09493 284 aa18.04■□□□□ 0.48
HPS1-202ENST00000338546 EIF2AK2P19525 551 aaKnown RBP18.04■□□□□ 0.48
HPS1-202ENST00000338546 DNM2P50570 870 aa18.04■□□□□ 0.48
HPS1-202ENST00000338546 CYP4A11Q02928 519 aa18.04■□□□□ 0.48
HPS1-202ENST00000338546 PPFIBP1Q86W92 1011 aa18.04■□□□□ 0.48
HPS1-202ENST00000338546 TPH2Q8IWU9 490 aa18.04■□□□□ 0.48
HPS1-202ENST00000338546 CDHR1Q96JP9 859 aa18.04■□□□□ 0.48
HPS1-202ENST00000338546 PANX2Q96RD6 677 aa18.04■□□□□ 0.48
HPS1-202ENST00000338546 BHMT2Q9H2M3 363 aa18.04■□□□□ 0.48
HPS1-202ENST00000338546 CYP39A1Q9NYL5 469 aa18.04■□□□□ 0.48
HPS1-202ENST00000338546 COL4A3BPQ9Y5P4 624 aa18.04■□□□□ 0.48
HPS1-202ENST00000338546 A0A0G2JMZ2 1700 aa18.04■□□□□ 0.48
HPS1-202ENST00000338546 NR3C2P08235 984 aa18.04■□□□□ 0.48
HPS1-202ENST00000338546 SFNP31947 248 aa18.04■□□□□ 0.48
HPS1-202ENST00000338546 COPB2P35606 906 aa18.04■□□□□ 0.48
HPS1-202ENST00000338546 JAK3P52333 1124 aa18.04■□□□□ 0.48
HPS1-202ENST00000338546 RINT1Q6NUQ1 792 aa18.04■□□□□ 0.48
HPS1-202ENST00000338546 MIER3Q7Z3K6 550 aa18.04■□□□□ 0.48
HPS1-202ENST00000338546 HPS3Q969F9 1004 aa18.04■□□□□ 0.48
HPS1-202ENST00000338546 IWS1Q96ST2 819 aa18.04■□□□□ 0.48
HPS1-202ENST00000338546 ZSWIM4Q9H7M6 989 aa18.04■□□□□ 0.48
HPS1-202ENST00000338546 AKR1B15C9JRZ8 316 aaPredicted RBP18.03■□□□□ 0.48
HPS1-202ENST00000338546 CHMP2AO43633 222 aa18.03■□□□□ 0.48
HPS1-202ENST00000338546 STX10O60499 249 aa18.03■□□□□ 0.48
HPS1-202ENST00000338546 COBLO75128 1261 aa18.03■□□□□ 0.48
HPS1-202ENST00000338546 TERF1P54274 439 aa18.03■□□□□ 0.48
HPS1-202ENST00000338546 FKBP3Q00688 224 aaKnown RBP18.03■□□□□ 0.48
HPS1-202ENST00000338546 KRT76Q01546 638 aa18.03■□□□□ 0.48
HPS1-202ENST00000338546 CTTNQ14247 550 aaKnown RBP18.03■□□□□ 0.48
HPS1-202ENST00000338546 ZCWPW2Q504Y3 356 aa18.03■□□□□ 0.48
HPS1-202ENST00000338546 C1orf186Q6ZWK4 172 aa18.03■□□□□ 0.48
HPS1-202ENST00000338546 FASTKD5Q7L8L6 764 aaKnown RBP18.03■□□□□ 0.48
HPS1-202ENST00000338546 RIOX2Q8IUF8 465 aa18.03■□□□□ 0.48
HPS1-202ENST00000338546 CNGA4Q8IV77 575 aa18.03■□□□□ 0.48
HPS1-202ENST00000338546 TC2NQ8N9U0 490 aa18.03■□□□□ 0.48
HPS1-202ENST00000338546 DNERQ8NFT8 737 aa18.03■□□□□ 0.48
HPS1-202ENST00000338546 ZNF507Q8TCN5 953 aa18.03■□□□□ 0.48
HPS1-202ENST00000338546 IQCDQ96DY2 449 aa18.03■□□□□ 0.48
HPS1-202ENST00000338546 CEP63Q96MT8 703 aa18.03■□□□□ 0.48
HPS1-202ENST00000338546 INPP4AQ96PE3 977 aaPredicted RBP18.03■□□□□ 0.48
HPS1-202ENST00000338546 SENP7Q9BQF6 1050 aa18.03■□□□□ 0.48
HPS1-202ENST00000338546 REEP2Q9BRK0 252 aa18.03■□□□□ 0.48
HPS1-202ENST00000338546 TUBGCP2Q9BSJ2 902 aa18.03■□□□□ 0.48
HPS1-202ENST00000338546 NAA15Q9BXJ9 866 aaKnown RBP18.03■□□□□ 0.48
HPS1-202ENST00000338546 VPS16Q9H269 839 aa18.03■□□□□ 0.48
HPS1-202ENST00000338546 ELP3Q9H9T3 547 aa18.03■□□□□ 0.48
HPS1-202ENST00000338546 OLFML3Q9NRN5 406 aa18.03■□□□□ 0.48
Retrieved 100 of 20,778 RNA–protein pairs in 49.2 ms