RNA–Protein interactions for RNA: ENST00000338325.1

CSMD2-202, Transcript of CUB and Sushi multiple domains 2, humanhuman

TSL 1 (best) BASIC

Gene CSMD2, Length 1,544 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSMD2-202ENST00000338325 CYTH3O43739 400 aa13.28□□□□□ -0.28
CSMD2-202ENST00000338325 RB1P06400 928 aa13.28□□□□□ -0.28
CSMD2-202ENST00000338325 TRDNQ13061 729 aa13.28□□□□□ -0.28
CSMD2-202ENST00000338325 UTP14CQ5TAP6 766 aaKnown RBP13.28□□□□□ -0.28
CSMD2-202ENST00000338325 POTEBQ6S5H4 581 aa13.28□□□□□ -0.28
CSMD2-202ENST00000338325 ADHFE1Q8IWW8 467 aa13.28□□□□□ -0.28
CSMD2-202ENST00000338325 C11orf84Q9BUA3 381 aaPredicted RBP13.28□□□□□ -0.28
CSMD2-202ENST00000338325 RTEL1Q9NZ71 1219 aa13.28□□□□□ -0.28
CSMD2-202ENST00000338325 MYO7AQ13402 2215 aa13.28□□□□□ -0.28
CSMD2-202ENST00000338325 ADGRA3Q8IWK6 1321 aa13.27□□□□□ -0.28
CSMD2-202ENST00000338325 PIEZO1Q92508 2521 aa13.27□□□□□ -0.28
CSMD2-202ENST00000338325 ERICH2A1L162 156 aa13.27□□□□□ -0.29
CSMD2-202ENST00000338325 IFIT3O14879 490 aaKnown RBP13.27□□□□□ -0.29
CSMD2-202ENST00000338325 LINC00271P0C7V0 271 aa13.27□□□□□ -0.29
CSMD2-202ENST00000338325 LTBRP36941 435 aa13.27□□□□□ -0.29
CSMD2-202ENST00000338325 UPF3BQ9BZI7 483 aaKnown RBP13.27□□□□□ -0.29
CSMD2-202ENST00000338325 KCNH6Q9H252 994 aa13.27□□□□□ -0.29
CSMD2-202ENST00000338325 IL25Q9H293 177 aa13.27□□□□□ -0.29
CSMD2-202ENST00000338325 LOXHD1Q8IVV2 1947 aa13.27□□□□□ -0.29
CSMD2-202ENST00000338325 NRCAMQ92823 1304 aa13.27□□□□□ -0.29
CSMD2-202ENST00000338325 TTC3P53804 2025 aa13.27□□□□□ -0.29
CSMD2-202ENST00000338325 CHRNA1P02708 482 aa13.26□□□□□ -0.29
CSMD2-202ENST00000338325 GHRP10912 638 aa13.26□□□□□ -0.29
CSMD2-202ENST00000338325 BMPR1AP36894 532 aa13.26□□□□□ -0.29
CSMD2-202ENST00000338325 SP4Q02446 784 aa13.26□□□□□ -0.29
CSMD2-202ENST00000338325 HYAL1Q12794 435 aa13.26□□□□□ -0.29
CSMD2-202ENST00000338325 CTC1Q2NKJ3 1217 aa13.26□□□□□ -0.29
CSMD2-202ENST00000338325 PCNX4Q63HM2 1172 aa13.26□□□□□ -0.29
CSMD2-202ENST00000338325 TAF2Q6P1X5 1199 aa13.26□□□□□ -0.29
CSMD2-202ENST00000338325 SENP7Q9BQF6 1050 aa13.26□□□□□ -0.29
CSMD2-202ENST00000338325 EHMT1Q9H9B1 1298 aa13.26□□□□□ -0.29
CSMD2-202ENST00000338325 RC3H2Q9HBD1 1191 aaKnown RBP13.26□□□□□ -0.29
CSMD2-202ENST00000338325 TELO2Q9Y4R8 837 aa13.26□□□□□ -0.29
CSMD2-202ENST00000338325 SUPT16HQ9Y5B9 1047 aaKnown RBP13.26□□□□□ -0.29
CSMD2-202ENST00000338325 C5orf42Q9H799 3197 aa13.26□□□□□ -0.29
CSMD2-202ENST00000338325 GRM6O15303 877 aa13.25□□□□□ -0.29
CSMD2-202ENST00000338325 IRS1P35568 1242 aa13.25□□□□□ -0.29
CSMD2-202ENST00000338325 MGAT3Q09327 533 aa13.25□□□□□ -0.29
CSMD2-202ENST00000338325 TROAPQ12815 778 aa13.25□□□□□ -0.29
CSMD2-202ENST00000338325 LPIN1Q14693 890 aa13.25□□□□□ -0.29
CSMD2-202ENST00000338325 WTAPQ15007 396 aa13.25□□□□□ -0.29
CSMD2-202ENST00000338325 SMAD2Q15796 467 aaKnown RBP13.25□□□□□ -0.29
CSMD2-202ENST00000338325 CLUL1Q15846 466 aa13.25□□□□□ -0.29
CSMD2-202ENST00000338325 XRRA1Q6P2D8 792 aa13.25□□□□□ -0.29
CSMD2-202ENST00000338325 RUFY4Q6ZNE9 571 aa13.25□□□□□ -0.29
CSMD2-202ENST00000338325 RSPH3Q86UC2 560 aa13.25□□□□□ -0.29
CSMD2-202ENST00000338325 GIMAP8Q8ND71 665 aaPredicted RBP13.25□□□□□ -0.29
CSMD2-202ENST00000338325 SMARCC2Q8TAQ2 1214 aa13.25□□□□□ -0.29
CSMD2-202ENST00000338325 CLP1Q92989 425 aaKnown RBP13.25□□□□□ -0.29
CSMD2-202ENST00000338325 CUL5Q93034 780 aa13.25□□□□□ -0.29
CSMD2-202ENST00000338325 POP1Q99575 1024 aaKnown RBP13.25□□□□□ -0.29
CSMD2-202ENST00000338325 SENP2Q9HC62 589 aa13.25□□□□□ -0.29
CSMD2-202ENST00000338325 ZNF318Q5VUA4 2279 aa13.25□□□□□ -0.29
CSMD2-202ENST00000338325 MBTPS2O43462 519 aa13.24□□□□□ -0.29
CSMD2-202ENST00000338325 IGHDP01880 384 aa13.24□□□□□ -0.29
CSMD2-202ENST00000338325 MMP1P03956 469 aa13.24□□□□□ -0.29
CSMD2-202ENST00000338325 TCF7P36402 384 aaPredicted RBP13.24□□□□□ -0.29
CSMD2-202ENST00000338325 MRE11P49959 708 aa13.24□□□□□ -0.29
CSMD2-202ENST00000338325 NHLH1Q02575 133 aa13.24□□□□□ -0.29
CSMD2-202ENST00000338325 DLX2Q07687 328 aaPredicted RBP13.24□□□□□ -0.29
CSMD2-202ENST00000338325 PPFIA1Q13136 1202 aa13.24□□□□□ -0.29
CSMD2-202ENST00000338325 BTG3Q14201 252 aaPredicted RBP13.24□□□□□ -0.29
CSMD2-202ENST00000338325 SART3Q15020 963 aaKnown RBP13.24□□□□□ -0.29
CSMD2-202ENST00000338325 RALYLQ86SE5 291 aaKnown RBP13.24□□□□□ -0.29
CSMD2-202ENST00000338325 NLRX1Q86UT6 975 aa13.24□□□□□ -0.29
CSMD2-202ENST00000338325 PIBF1Q8WXW3 757 aa13.24□□□□□ -0.29
CSMD2-202ENST00000338325 U3KPZ7 1027 aaPredicted RBP13.24□□□□□ -0.29
CSMD2-202ENST00000338325 ENPP3O14638 875 aa13.23□□□□□ -0.29
CSMD2-202ENST00000338325 TBX10O75333 385 aa13.23□□□□□ -0.29
CSMD2-202ENST00000338325 CYP21A2P08686 494 aa13.23□□□□□ -0.29
CSMD2-202ENST00000338325 SMAD4Q13485 552 aaKnown RBP13.23□□□□□ -0.29
CSMD2-202ENST00000338325 GRIK4Q16099 956 aa13.23□□□□□ -0.29
CSMD2-202ENST00000338325 FBXO47Q5MNV8 452 aa13.23□□□□□ -0.29
CSMD2-202ENST00000338325 USP17L6PQ6QN14 398 aa13.23□□□□□ -0.29
CSMD2-202ENST00000338325 CATIPQ7Z7H3 387 aa13.23□□□□□ -0.29
CSMD2-202ENST00000338325 ZNF689Q96CS4 500 aaPredicted RBP13.23□□□□□ -0.29
CSMD2-202ENST00000338325 FBXL18Q96ME1 805 aa13.23□□□□□ -0.29
CSMD2-202ENST00000338325 PLVAPQ9BX97 442 aa13.23□□□□□ -0.29
CSMD2-202ENST00000338325 TUBE1Q9UJT0 475 aa13.23□□□□□ -0.29
CSMD2-202ENST00000338325 PLXNA4Q9HCM2 1894 aa13.23□□□□□ -0.29
CSMD2-202ENST00000338325 PIK3CDO00329 1044 aa13.23□□□□□ -0.29
CSMD2-202ENST00000338325 MEIS2O14770 477 aa13.23□□□□□ -0.29
CSMD2-202ENST00000338325 HERC4Q5GLZ8 1057 aaPredicted RBP13.23□□□□□ -0.29
CSMD2-202ENST00000338325 TSHZ1Q6ZSZ6 1077 aa13.23□□□□□ -0.29
CSMD2-202ENST00000338325 HFE2Q6ZVN8 426 aa13.23□□□□□ -0.29
CSMD2-202ENST00000338325 NCOA7Q8NI08 942 aa13.23□□□□□ -0.29
CSMD2-202ENST00000338325 GPRASP2Q96D09 838 aa13.23□□□□□ -0.29
CSMD2-202ENST00000338325 RRP36Q96EU6 259 aaKnown RBP13.23□□□□□ -0.29
CSMD2-202ENST00000338325 CDHR1Q96JP9 859 aa13.23□□□□□ -0.29
CSMD2-202ENST00000338325 SPZ1Q9BXG8 430 aa13.23□□□□□ -0.29
CSMD2-202ENST00000338325 IGFLR1Q9H665 355 aa13.23□□□□□ -0.29
CSMD2-202ENST00000338325 ERAP1Q9NZ08 941 aa13.23□□□□□ -0.29
CSMD2-202ENST00000338325 MUTYHQ9UIF7 546 aa13.23□□□□□ -0.29
CSMD2-202ENST00000338325 CD207Q9UJ71 328 aa13.23□□□□□ -0.29
CSMD2-202ENST00000338325 CDY2AQ9Y6F7 541 aa13.23□□□□□ -0.29
CSMD2-202ENST00000338325 WDFY4Q6ZS81 3184 aa13.22□□□□□ -0.29
CSMD2-202ENST00000338325 MBLAC1A4D2B0 266 aaPredicted RBP13.22□□□□□ -0.29
CSMD2-202ENST00000338325 E7EWF7 191 aa13.22□□□□□ -0.29
CSMD2-202ENST00000338325 LINC01565O15544 149 aa13.22□□□□□ -0.29
CSMD2-202ENST00000338325 DGKIO75912 1065 aa13.22□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 25.7 ms