RNA–Protein interactions for RNA: ENST00000337659.10

PRPF4B-201, Transcript of pre-mRNA processing factor 4B, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PRPF4B, Length 4,415 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF4B-201ENST00000337659 TXLNAP40222 546 aa6□□□□□ -1.45
PRPF4B-201ENST00000337659 PAK1Q13153 545 aa6□□□□□ -1.45
PRPF4B-201ENST00000337659 GRM1Q13255 1194 aa6□□□□□ -1.45
PRPF4B-201ENST00000337659 CEP55Q53EZ4 464 aa6□□□□□ -1.45
PRPF4B-201ENST00000337659 FAM83BQ5T0W9 1011 aa6□□□□□ -1.45
PRPF4B-201ENST00000337659 CATSPER3Q86XQ3 398 aa6□□□□□ -1.45
PRPF4B-201ENST00000337659 TRIM59Q8IWR1 403 aa6□□□□□ -1.45
PRPF4B-201ENST00000337659 USP6NLQ92738 828 aa6□□□□□ -1.45
PRPF4B-201ENST00000337659 P2RX5Q93086 422 aa6□□□□□ -1.45
PRPF4B-201ENST00000337659 PRIMPOLQ96LW4 560 aa6□□□□□ -1.45
PRPF4B-201ENST00000337659 NUDT12Q9BQG2 462 aa6□□□□□ -1.45
PRPF4B-201ENST00000337659 UBA5Q9GZZ9 404 aa6□□□□□ -1.45
PRPF4B-201ENST00000337659 TBC1D22BQ9NU19 505 aa6□□□□□ -1.45
PRPF4B-201ENST00000337659 MAFBQ9Y5Q3 323 aaPredicted RBP6□□□□□ -1.45
PRPF4B-201ENST00000337659 VWA3AA6NCI4 1184 aa6□□□□□ -1.45
PRPF4B-201ENST00000337659 GOLGA6L4A6NEF3 574 aa6□□□□□ -1.45
PRPF4B-201ENST00000337659 USP17L15C9J2P7 530 aa6□□□□□ -1.45
PRPF4B-201ENST00000337659 USP17L13C9JLJ4 530 aa6□□□□□ -1.45
PRPF4B-201ENST00000337659 USP17L11C9JVI0 530 aa6□□□□□ -1.45
PRPF4B-201ENST00000337659 USP17L18D6R9N7 530 aa6□□□□□ -1.45
PRPF4B-201ENST00000337659 USP17L22D6RA61 530 aa6□□□□□ -1.45
PRPF4B-201ENST00000337659 USP17L17D6RBQ6 530 aa6□□□□□ -1.45
PRPF4B-201ENST00000337659 USP17L19D6RCP7 530 aa6□□□□□ -1.45
PRPF4B-201ENST00000337659 USP17L20D6RJB6 530 aa6□□□□□ -1.45
PRPF4B-201ENST00000337659 GCOM1H8Y6P7 765 aaPredicted RBP6□□□□□ -1.45
PRPF4B-201ENST00000337659 PDXKO00764 312 aa6□□□□□ -1.45
PRPF4B-201ENST00000337659 POLR2MP0CAP2 368 aa6□□□□□ -1.45
PRPF4B-201ENST00000337659 JAM2P57087 298 aa6□□□□□ -1.45
PRPF4B-201ENST00000337659 USP17L24Q0WX57 530 aa6□□□□□ -1.45
PRPF4B-201ENST00000337659 TMEM266Q2M3C6 531 aa6□□□□□ -1.45
PRPF4B-201ENST00000337659 SUPT20HL1Q3ZLR7 823 aa6□□□□□ -1.45
PRPF4B-201ENST00000337659 REXO1L1PQ8IX06 675 aa6□□□□□ -1.45
PRPF4B-201ENST00000337659 CKAP2LQ8IYA6 745 aa6□□□□□ -1.45
PRPF4B-201ENST00000337659 GLIS2Q9BZE0 524 aaPredicted RBP6□□□□□ -1.45
PRPF4B-201ENST00000337659 AGTPBP1Q9UPW5 1226 aa6□□□□□ -1.45
PRPF4B-201ENST00000337659 GOLGA6L6A8MZA4 724 aa6□□□□□ -1.45
PRPF4B-201ENST00000337659 PJA2O43164 708 aa6□□□□□ -1.45
PRPF4B-201ENST00000337659 CLSTN1O94985 981 aa6□□□□□ -1.45
PRPF4B-201ENST00000337659 MCM7P33993 719 aa6□□□□□ -1.45
PRPF4B-201ENST00000337659 FOXD4L5Q5VV16 416 aaPredicted RBP6□□□□□ -1.45
PRPF4B-201ENST00000337659 RRAGBQ5VZM2 374 aa6□□□□□ -1.45
PRPF4B-201ENST00000337659 ANKRD23Q86SG2 305 aa6□□□□□ -1.45
PRPF4B-201ENST00000337659 PIAS4Q8N2W9 510 aaPredicted RBP6□□□□□ -1.45
PRPF4B-201ENST00000337659 CACTINQ8WUQ7 758 aaKnown RBP6□□□□□ -1.45
PRPF4B-201ENST00000337659 FOXD4L4Q8WXT5 416 aaPredicted RBP6□□□□□ -1.45
PRPF4B-201ENST00000337659 MS4A4AQ96JQ5 239 aa6□□□□□ -1.45
PRPF4B-201ENST00000337659 NAP1L5Q96NT1 182 aaPredicted RBP6□□□□□ -1.45
PRPF4B-201ENST00000337659 CYP39A1Q9NYL5 469 aa6□□□□□ -1.45
PRPF4B-201ENST00000337659 ASTN2O75129 1339 aaPredicted RBP6□□□□□ -1.45
PRPF4B-201ENST00000337659 TMEM232C9JQI7 657 aa6□□□□□ -1.45
PRPF4B-201ENST00000337659 GFPT2O94808 682 aa6□□□□□ -1.45
PRPF4B-201ENST00000337659 JAK3P52333 1124 aa6□□□□□ -1.45
PRPF4B-201ENST00000337659 CACNB3P54284 484 aa6□□□□□ -1.45
PRPF4B-201ENST00000337659 GTF2BQ00403 316 aa6□□□□□ -1.45
PRPF4B-201ENST00000337659 ITGB3BPQ13352 177 aaPredicted RBP6□□□□□ -1.45
PRPF4B-201ENST00000337659 CAMK4Q16566 473 aa6□□□□□ -1.45
PRPF4B-201ENST00000337659 SPECC1LQ69YQ0 1117 aa6□□□□□ -1.45
PRPF4B-201ENST00000337659 TRIM65Q6PJ69 517 aa6□□□□□ -1.45
PRPF4B-201ENST00000337659 FRMD5Q7Z6J6 570 aa6□□□□□ -1.45
PRPF4B-201ENST00000337659 PNMA8AQ86V59 439 aaPredicted RBP6□□□□□ -1.45
PRPF4B-201ENST00000337659 RASGRP4Q8TDF6 673 aa6□□□□□ -1.45
PRPF4B-201ENST00000337659 CALR3Q96L12 384 aaKnown RBP6□□□□□ -1.45
PRPF4B-201ENST00000337659 XPO4Q9C0E2 1151 aaKnown RBP6□□□□□ -1.45
PRPF4B-201ENST00000337659 TLL2Q9Y6L7 1015 aa6□□□□□ -1.45
PRPF4B-201ENST00000337659 P4HA2O15460 535 aa5.99□□□□□ -1.45
PRPF4B-201ENST00000337659 MFAP3LO75121 409 aa5.99□□□□□ -1.45
PRPF4B-201ENST00000337659 PMS1P54277 932 aaKnown RBP5.99□□□□□ -1.45
PRPF4B-201ENST00000337659 SPP2Q13103 211 aa5.99□□□□□ -1.45
PRPF4B-201ENST00000337659 E4F1Q66K89 784 aaPredicted RBP5.99□□□□□ -1.45
PRPF4B-201ENST00000337659 CDCA2Q69YH5 1023 aaPredicted RBP5.99□□□□□ -1.45
PRPF4B-201ENST00000337659 DAW1Q8N136 415 aa5.99□□□□□ -1.45
PRPF4B-201ENST00000337659 PDCD2LQ9BRP1 358 aa5.99□□□□□ -1.45
PRPF4B-201ENST00000337659 BIN2Q9UBW5 565 aaPredicted RBP5.99□□□□□ -1.45
PRPF4B-201ENST00000337659 COL1A2P08123 1366 aa5.99□□□□□ -1.45
PRPF4B-201ENST00000337659 FNDC1Q4ZHG4 1894 aaPredicted RBP5.99□□□□□ -1.45
PRPF4B-201ENST00000337659 KIF2AO00139 706 aaPredicted RBP5.99□□□□□ -1.45
PRPF4B-201ENST00000337659 GDF11O95390 407 aa5.99□□□□□ -1.45
PRPF4B-201ENST00000337659 SLC25A27O95847 323 aa5.99□□□□□ -1.45
PRPF4B-201ENST00000337659 PRKCIP41743 596 aa5.99□□□□□ -1.45
PRPF4B-201ENST00000337659 HADHBP55084 474 aaKnown RBP5.99□□□□□ -1.45
PRPF4B-201ENST00000337659 MAP3K9P80192 1104 aa5.99□□□□□ -1.45
PRPF4B-201ENST00000337659 COASYQ13057 564 aa5.99□□□□□ -1.45
PRPF4B-201ENST00000337659 CBLBQ13191 982 aa5.99□□□□□ -1.45
PRPF4B-201ENST00000337659 TMEM132BQ14DG7 1078 aa5.99□□□□□ -1.45
PRPF4B-201ENST00000337659 KARSQ15046 597 aaKnown RBP5.99□□□□□ -1.45
PRPF4B-201ENST00000337659 NBPF12Q5TAG4 269 aaPredicted RBP5.99□□□□□ -1.45
PRPF4B-201ENST00000337659 ABHD15Q6UXT9 468 aa5.99□□□□□ -1.45
PRPF4B-201ENST00000337659 TNS4Q8IZW8 715 aa5.99□□□□□ -1.45
PRPF4B-201ENST00000337659 NUP58Q9BVL2 599 aa5.99□□□□□ -1.45
PRPF4B-201ENST00000337659 GZF1Q9H116 711 aaPredicted RBP5.99□□□□□ -1.45
PRPF4B-201ENST00000337659 TTC12Q9H892 705 aaPredicted RBP5.99□□□□□ -1.45
PRPF4B-201ENST00000337659 WRAP73Q9P2S5 460 aaPredicted RBP5.99□□□□□ -1.45
PRPF4B-201ENST00000337659 MYO1AQ9UBC5 1043 aa5.99□□□□□ -1.45
PRPF4B-201ENST00000337659 LRWD1Q9UFC0 647 aa5.99□□□□□ -1.45
PRPF4B-201ENST00000337659 FBXO40Q9UH90 709 aa5.99□□□□□ -1.45
PRPF4B-201ENST00000337659 TCP10L2B9ZVM9 353 aa5.99□□□□□ -1.45
PRPF4B-201ENST00000337659 GYPCP04921 128 aa5.99□□□□□ -1.45
PRPF4B-201ENST00000337659 TGFB3P10600 412 aa5.99□□□□□ -1.45
PRPF4B-201ENST00000337659 RFX1P22670 979 aa5.99□□□□□ -1.45
PRPF4B-201ENST00000337659 CDC25AP30304 524 aa5.99□□□□□ -1.45
Retrieved 100 of 20,778 RNA–protein pairs in 27.8 ms