RNA–Protein interactions for RNA: ENST00000334218.9

CDC42BPA-201, Transcript of CDC42 binding protein kinase alpha, humanhuman

TSL 5 BASIC

Gene CDC42BPA, Length 10,134 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42BPA-201ENST00000334218 CCDC81Q6ZN84 652 aa6.52□□□□□ -1.37
CDC42BPA-201ENST00000334218 RFKQ969G6 155 aa6.52□□□□□ -1.37
CDC42BPA-201ENST00000334218 CEP295NLQ96MC4 621 aa6.52□□□□□ -1.37
CDC42BPA-201ENST00000334218 AZI2Q9H6S1 392 aa6.52□□□□□ -1.37
CDC42BPA-201ENST00000334218 RAD18Q9NS91 495 aa6.52□□□□□ -1.37
CDC42BPA-201ENST00000334218 SNX8Q9Y5X2 465 aa6.52□□□□□ -1.37
CDC42BPA-201ENST00000334218 ATP10BO94823 1461 aa6.52□□□□□ -1.37
CDC42BPA-201ENST00000334218 TTLL13PA6NNM8 815 aa6.52□□□□□ -1.37
CDC42BPA-201ENST00000334218 GIPC1O14908 333 aa6.52□□□□□ -1.37
CDC42BPA-201ENST00000334218 SLC4A1P02730 911 aa6.52□□□□□ -1.37
CDC42BPA-201ENST00000334218 NUP107P57740 925 aa6.52□□□□□ -1.37
CDC42BPA-201ENST00000334218 NCAPHQ15003 741 aa6.52□□□□□ -1.37
CDC42BPA-201ENST00000334218 KCNH5Q8NCM2 988 aa6.52□□□□□ -1.37
CDC42BPA-201ENST00000334218 TBC1D15Q8TC07 691 aa6.52□□□□□ -1.37
CDC42BPA-201ENST00000334218 OSBPL10Q9BXB5 764 aa6.52□□□□□ -1.37
CDC42BPA-201ENST00000334218 RHBDL2Q9NX52 303 aa6.52□□□□□ -1.37
CDC42BPA-201ENST00000334218 PKD2L2Q9NZM6 624 aa6.52□□□□□ -1.37
CDC42BPA-201ENST00000334218 RUVBL2Q9Y230 463 aaKnown RBP6.52□□□□□ -1.37
CDC42BPA-201ENST00000334218 PNMA8CA0A1B0GUJ8 204 aa6.52□□□□□ -1.37
CDC42BPA-201ENST00000334218 U2AF1L5P0DN76 240 aaPredicted RBP6.52□□□□□ -1.37
CDC42BPA-201ENST00000334218 U2AF1Q01081 240 aaKnown RBP eCLIP6.52□□□□□ -1.375e-7■■■■□ 23.8
CDC42BPA-201ENST00000334218 PPP2R5BQ15173 497 aa6.52□□□□□ -1.37
CDC42BPA-201ENST00000334218 C20orf194Q5TEA3 1177 aa6.52□□□□□ -1.37
CDC42BPA-201ENST00000334218 APOL2Q9BQE5 337 aa6.52□□□□□ -1.37
CDC42BPA-201ENST00000334218 TCEAL7Q9BRU2 100 aa6.52□□□□□ -1.37
CDC42BPA-201ENST00000334218 MND1Q9BWT6 205 aa6.52□□□□□ -1.37
CDC42BPA-201ENST00000334218 IL1RL2Q9HB29 575 aa6.52□□□□□ -1.37
CDC42BPA-201ENST00000334218 FAM8A1Q9UBU6 413 aa6.52□□□□□ -1.37
CDC42BPA-201ENST00000334218 SUN2Q9UH99 717 aa6.52□□□□□ -1.37
CDC42BPA-201ENST00000334218 ZNF644Q9H582 1327 aaPredicted RBP6.52□□□□□ -1.37
CDC42BPA-201ENST00000334218 SNAP23O00161 211 aa6.52□□□□□ -1.37
CDC42BPA-201ENST00000334218 MAPK1P28482 360 aa6.52□□□□□ -1.37
CDC42BPA-201ENST00000334218 IGHMBP2P38935 993 aaKnown RBP6.52□□□□□ -1.37
CDC42BPA-201ENST00000334218 ETV5P41161 510 aa6.52□□□□□ -1.37
CDC42BPA-201ENST00000334218 PPP2R3AQ06190 1150 aa6.52□□□□□ -1.37
CDC42BPA-201ENST00000334218 DGUOKQ16854 277 aa6.52□□□□□ -1.37
CDC42BPA-201ENST00000334218 ZMYM1Q5SVZ6 1142 aa6.52□□□□□ -1.37
CDC42BPA-201ENST00000334218 BBS1Q8NFJ9 593 aa6.52□□□□□ -1.37
CDC42BPA-201ENST00000334218 NGLY1Q96IV0 654 aa6.52□□□□□ -1.37
CDC42BPA-201ENST00000334218 PPP1R16BQ96T49 567 aa6.52□□□□□ -1.37
CDC42BPA-201ENST00000334218 UNKQ9C0B0 810 aaKnown RBP6.52□□□□□ -1.37
CDC42BPA-201ENST00000334218 NOL6Q9H6R4 1146 aaKnown RBP6.52□□□□□ -1.37
CDC42BPA-201ENST00000334218 EPB41L5Q9HCM4 733 aa6.52□□□□□ -1.37
CDC42BPA-201ENST00000334218 MLXIPLQ9NP71 852 aa6.52□□□□□ -1.37
CDC42BPA-201ENST00000334218 GABBR1Q9UBS5 961 aa6.52□□□□□ -1.37
CDC42BPA-201ENST00000334218 DYNC1LI1Q9Y6G9 523 aaKnown RBP6.52□□□□□ -1.37
CDC42BPA-201ENST00000334218 A0A1W2PRG6 482 aa6.51□□□□□ -1.37
CDC42BPA-201ENST00000334218 TCP11X1B4DZS4 312 aa6.51□□□□□ -1.37
CDC42BPA-201ENST00000334218 C9IYK1 514 aa6.51□□□□□ -1.37
CDC42BPA-201ENST00000334218 DHX15O43143 795 aaKnown RBP6.51□□□□□ -1.37
CDC42BPA-201ENST00000334218 SKIV2L2P42285 1042 aaKnown RBP6.51□□□□□ -1.37
CDC42BPA-201ENST00000334218 PSME3P61289 254 aa6.51□□□□□ -1.37
CDC42BPA-201ENST00000334218 UBE2HP62256 183 aa6.51□□□□□ -1.37
CDC42BPA-201ENST00000334218 NAA35Q5VZE5 725 aa6.51□□□□□ -1.37
CDC42BPA-201ENST00000334218 TCAIMQ8N3R3 496 aa6.51□□□□□ -1.37
CDC42BPA-201ENST00000334218 WDR36Q8NI36 951 aaKnown RBP6.51□□□□□ -1.37
CDC42BPA-201ENST00000334218 SBDSQ9Y3A5 250 aaKnown RBP eCLIP6.51□□□□□ -1.37
CDC42BPA-201ENST00000334218 A0A1W2PQ72 361 aa6.51□□□□□ -1.37
CDC42BPA-201ENST00000334218 ZNF879B4DU55 563 aa6.51□□□□□ -1.37
CDC42BPA-201ENST00000334218 TAF4O00268 1085 aa6.51□□□□□ -1.37
CDC42BPA-201ENST00000334218 SOX5P35711 763 aa6.51□□□□□ -1.37
CDC42BPA-201ENST00000334218 STAT1P42224 750 aa6.51□□□□□ -1.37
CDC42BPA-201ENST00000334218 PLCB3Q01970 1234 aa6.51□□□□□ -1.37
CDC42BPA-201ENST00000334218 USF2Q15853 346 aaPredicted RBP6.51□□□□□ -1.37
CDC42BPA-201ENST00000334218 SRLQ86TD4 932 aa6.51□□□□□ -1.37
CDC42BPA-201ENST00000334218 KIAA0825Q8IV33 1275 aa6.51□□□□□ -1.37
CDC42BPA-201ENST00000334218 IQCF2Q8IXL9 164 aa6.51□□□□□ -1.37
CDC42BPA-201ENST00000334218 BBS4Q96RK4 519 aa6.51□□□□□ -1.37
CDC42BPA-201ENST00000334218 NEO1Q92859 1461 aa6.51□□□□□ -1.37
CDC42BPA-201ENST00000334218 A0A0G2JPF8 293 aa6.51□□□□□ -1.37
CDC42BPA-201ENST00000334218 HNRNPCL3B7ZW38 293 aa6.51□□□□□ -1.37
CDC42BPA-201ENST00000334218 MYL1P05976 194 aa6.51□□□□□ -1.37
CDC42BPA-201ENST00000334218 HNRNPCL4P0DMR1 293 aa6.51□□□□□ -1.37
CDC42BPA-201ENST00000334218 APOBRQ0VD83 1088 aa6.51□□□□□ -1.37
CDC42BPA-201ENST00000334218 PACS2Q86VP3 889 aa6.51□□□□□ -1.37
CDC42BPA-201ENST00000334218 NOSTRINQ8IVI9 506 aa6.51□□□□□ -1.37
CDC42BPA-201ENST00000334218 MOAP1Q96BY2 351 aa6.51□□□□□ -1.37
CDC42BPA-201ENST00000334218 RAB17Q9H0T7 212 aa6.51□□□□□ -1.37
CDC42BPA-201ENST00000334218 ADAMTS12P58397 1594 aa6.51□□□□□ -1.37
CDC42BPA-201ENST00000334218 SCG2P13521 617 aa6.51□□□□□ -1.37
CDC42BPA-201ENST00000334218 EIF2S3P41091 472 aaKnown RBP6.51□□□□□ -1.37
CDC42BPA-201ENST00000334218 RASSF7Q02833 373 aa6.51□□□□□ -1.37
CDC42BPA-201ENST00000334218 TNNI3KQ59H18 835 aa6.51□□□□□ -1.37
CDC42BPA-201ENST00000334218 SMIM15Q7Z3B0 74 aa6.51□□□□□ -1.37
CDC42BPA-201ENST00000334218 CIDECQ96AQ7 238 aaPredicted RBP6.51□□□□□ -1.37
CDC42BPA-201ENST00000334218 EFCAB8A8MWE9 144 aa6.51□□□□□ -1.37
CDC42BPA-201ENST00000334218 CKBP12277 381 aa6.51□□□□□ -1.37
CDC42BPA-201ENST00000334218 ZC2HC1CQ53FD0 456 aaPredicted RBP6.51□□□□□ -1.37
CDC42BPA-201ENST00000334218 MTMR9Q96QG7 549 aa6.51□□□□□ -1.37
CDC42BPA-201ENST00000334218 BBS2Q9BXC9 721 aa6.51□□□□□ -1.37
CDC42BPA-201ENST00000334218 DNALI1O14645 258 aaPredicted RBP6.51□□□□□ -1.37
CDC42BPA-201ENST00000334218 SKAP2O75563 359 aaPredicted RBP6.51□□□□□ -1.37
CDC42BPA-201ENST00000334218 GJC1P36383 396 aa6.51□□□□□ -1.37
CDC42BPA-201ENST00000334218 RARS2Q5T160 578 aaKnown RBP6.51□□□□□ -1.37
CDC42BPA-201ENST00000334218 CENPUQ71F23 418 aa6.51□□□□□ -1.37
CDC42BPA-201ENST00000334218 PATL1Q86TB9 770 aaKnown RBP6.51□□□□□ -1.37
CDC42BPA-201ENST00000334218 PJA1Q8NG27 643 aa6.51□□□□□ -1.37
CDC42BPA-201ENST00000334218 SSH1Q8WYL5 1049 aa6.51□□□□□ -1.37
CDC42BPA-201ENST00000334218 PUF60Q9UHX1 559 aaKnown RBP6.51□□□□□ -1.37
CDC42BPA-201ENST00000334218 PARP3Q9Y6F1 533 aa6.51□□□□□ -1.37
Retrieved 100 of 20,778 RNA–protein pairs in 19.8 ms